BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005971
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus comm...   153   1e-35
emb|CBI30132.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplast...   150   1e-34
ref|XP_003521129.1| PREDICTED: DNA gyrase subunit B, chloroplast...   149   2e-34
sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chlor...   148   4e-34

>ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus communis]
           gi|223538602|gb|EEF40205.1| DNA gyrase subunit B,
           putative [Ricinus communis]
          Length = 732

 Score =  153 bits (387), Expect = 1e-35
 Identities = 65/87 (74%), Positives = 84/87 (96%)
 Frame = -2

Query: 262 VFTTSVEFDHTTVAGRIRELAFLNPELIITLRKEDDDPEKSQHNEYYYAGGLLEYVKWLN 83
           VFTT++EFD+ T+AGR+RELAFLNP+L ITL+KED+DPEK+Q++EY+YAGGL+EYVKWLN
Sbjct: 266 VFTTAIEFDYNTIAGRVRELAFLNPKLTITLKKEDNDPEKNQYDEYFYAGGLIEYVKWLN 325

Query: 82  SDKKPIHDIVGFRKEVEGITIDLALQW 2
           +DKKP+HD+VGF KE++GITID+ALQW
Sbjct: 326 TDKKPLHDVVGFGKEIDGITIDMALQW 352


>emb|CBI30132.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score =  150 bits (378), Expect = 1e-34
 Identities = 66/87 (75%), Positives = 80/87 (91%)
 Frame = -2

Query: 262 VFTTSVEFDHTTVAGRIRELAFLNPELIITLRKEDDDPEKSQHNEYYYAGGLLEYVKWLN 83
           VFTT ++FD+ T+AGRIRELAFLNPEL ITLRKED DPEK+Q+NEY YAGGL+EYV+WLN
Sbjct: 241 VFTTEIQFDYNTIAGRIRELAFLNPELAITLRKEDKDPEKNQYNEYCYAGGLVEYVRWLN 300

Query: 82  SDKKPIHDIVGFRKEVEGITIDLALQW 2
           +DKKP+HD+VGFRK  +GI+ID+ALQW
Sbjct: 301 TDKKPVHDVVGFRKVADGISIDVALQW 327


>ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
           [Vitis vinifera]
          Length = 719

 Score =  150 bits (378), Expect = 1e-34
 Identities = 66/87 (75%), Positives = 80/87 (91%)
 Frame = -2

Query: 262 VFTTSVEFDHTTVAGRIRELAFLNPELIITLRKEDDDPEKSQHNEYYYAGGLLEYVKWLN 83
           VFTT ++FD+ T+AGRIRELAFLNPEL ITLRKED DPEK+Q+NEY YAGGL+EYV+WLN
Sbjct: 253 VFTTEIQFDYNTIAGRIRELAFLNPELAITLRKEDKDPEKNQYNEYCYAGGLVEYVRWLN 312

Query: 82  SDKKPIHDIVGFRKEVEGITIDLALQW 2
           +DKKP+HD+VGFRK  +GI+ID+ALQW
Sbjct: 313 TDKKPVHDVVGFRKVADGISIDVALQW 339


>ref|XP_003521129.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
           [Glycine max]
          Length = 726

 Score =  149 bits (377), Expect = 2e-34
 Identities = 64/87 (73%), Positives = 80/87 (91%)
 Frame = -2

Query: 262 VFTTSVEFDHTTVAGRIRELAFLNPELIITLRKEDDDPEKSQHNEYYYAGGLLEYVKWLN 83
           VFTT+++FDH T+AGRIRELAFLNP+L ITLRKED+DPEK Q+NEY+YAGGL+EYVKWLN
Sbjct: 260 VFTTAIQFDHNTIAGRIRELAFLNPKLTITLRKEDNDPEKVQYNEYFYAGGLVEYVKWLN 319

Query: 82  SDKKPIHDIVGFRKEVEGITIDLALQW 2
           +DKK +HD++ FRKE +GIT+D+A QW
Sbjct: 320 TDKKALHDVLSFRKETDGITVDIAFQW 346


>sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
           Flags: Precursor gi|38017095|gb|AAR07943.1| DNA gyrase B
           subunit [Nicotiana benthamiana]
          Length = 731

 Score =  148 bits (374), Expect = 4e-34
 Identities = 66/87 (75%), Positives = 79/87 (90%)
 Frame = -2

Query: 262 VFTTSVEFDHTTVAGRIRELAFLNPELIITLRKEDDDPEKSQHNEYYYAGGLLEYVKWLN 83
           VFTT ++FD+ T+AGRIRELAFLNPEL I L+KED DPEK Q NEY+YAGGL+EYVKWLN
Sbjct: 265 VFTTEMQFDYNTIAGRIRELAFLNPELTIALKKEDIDPEKIQCNEYFYAGGLVEYVKWLN 324

Query: 82  SDKKPIHDIVGFRKEVEGITIDLALQW 2
           +DKKP+HD++GFRKE +GITID+ALQW
Sbjct: 325 ADKKPLHDVLGFRKEADGITIDMALQW 351