BLASTX nr result

ID: Coptis25_contig00005965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005965
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509420.1| interferon-induced guanylate-binding protein...    40   2e-08

>ref|XP_002509420.1| interferon-induced guanylate-binding protein, putative [Ricinus
           communis] gi|223549319|gb|EEF50807.1| interferon-induced
           guanylate-binding protein, putative [Ricinus communis]
          Length = 1065

 Score = 39.7 bits (91), Expect(3) = 2e-08
 Identities = 17/26 (65%), Positives = 22/26 (84%)
 Frame = -3

Query: 233 RTQSAQEEAAEWKWKFDLAAQEAKAA 156
           +T+SAQEEAAEWK K+D+  +E KAA
Sbjct: 634 QTKSAQEEAAEWKRKYDITVRETKAA 659



 Score = 37.4 bits (85), Expect(3) = 2e-08
 Identities = 21/42 (50%), Positives = 25/42 (59%)
 Frame = -2

Query: 357 KENVTRFLSKQRA*EGQSHGEINTLNYRASATEVMLGAAREQ 232
           K    + LSKQ+A E Q+  EI  L  R+SATE  L AA EQ
Sbjct: 593 KRKHDQLLSKQKADEDQTSSEIAVLKSRSSATEARLAAAHEQ 634



 Score = 25.4 bits (54), Expect(3) = 2e-08
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -1

Query: 385 SARQ*SLDWKRKCDQIL 335
           SA+Q   DWKRK DQ+L
Sbjct: 584 SAKQEMSDWKRKHDQLL 600


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