BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005952
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40278.3| unnamed protein product [Vitis vinifera]               93   5e-17
emb|CAA09853.1| cyclin D3.1 protein [Nicotiana tabacum]                92   1e-16
ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]       92   1e-16
emb|CAQ03484.1| cyclin D3 [Actinidia deliciosa var. deliciosa]         90   4e-16
ref|XP_002310704.1| predicted protein [Populus trichocarpa] gi|1...    90   4e-16

>emb|CBI40278.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score = 93.2 bits (230), Expect = 5e-17
 Identities = 55/136 (40%), Positives = 71/136 (52%)
 Frame = +1

Query: 337 YLLDALYCXXXXXXXXXXXXXXNSNVTNETTNPTTFLLEQDLFXXXXXXXXXXXXXXXXX 516
           +LLDALYC                     +T     LLEQDLF                 
Sbjct: 20  FLLDALYCEEERWEEEEEDECLQEEAYPSSTLLPLLLLEQDLF----------------- 62

Query: 517 XXXXXXXXXXFWEDEELVLLFSKEKETHLLINSSNFDIDSSLVLARKEAVEWMLKVDAHY 696
                      WEDEEL+ LFSKE E    + + N ++D +L +AR++AVEWM+KV+AHY
Sbjct: 63  -----------WEDEELLSLFSKE-EQQASLGAGNGEMDGALAVARRQAVEWMMKVNAHY 110

Query: 697 GFSALTAVLAVNYLDR 744
           GFSA+TA+LA+NYLDR
Sbjct: 111 GFSAVTAILAINYLDR 126


>emb|CAA09853.1| cyclin D3.1 protein [Nicotiana tabacum]
          Length = 373

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 64/149 (42%), Positives = 73/149 (48%), Gaps = 13/149 (8%)
 Frame = +1

Query: 337 YLLDALYCXXXXXXXXXXXXXX------NSNVTNETTNPTT-------FLLEQDLFXXXX 477
           +LLDALYC                    +S VT  TT  T         LLEQDLF    
Sbjct: 15  FLLDALYCEEEEEKWGDLVDDETIITPLSSEVTTTTTTTTKPNSLLPLLLLEQDLF---- 70

Query: 478 XXXXXXXXXXXXXXXXXXXXXXXFWEDEELVLLFSKEKETHLLINSSNFDIDSSLVLARK 657
                                   WEDEEL+ LFSKEKETH   NS  F  DS L  AR 
Sbjct: 71  ------------------------WEDEELLSLFSKEKETHCWFNS--FQDDSLLCSARV 104

Query: 658 EAVEWMLKVDAHYGFSALTAVLAVNYLDR 744
           ++VEW+LKV+ +YGFSALTAVLA+NY DR
Sbjct: 105 DSVEWILKVNGYYGFSALTAVLAINYFDR 133


>ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]
          Length = 386

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 58/148 (39%), Positives = 77/148 (52%), Gaps = 12/148 (8%)
 Frame = +1

Query: 337 YLLDALYCXXXXXXXXXXXXXXNS-------NVTNETTNPTT-----FLLEQDLFXXXXX 480
           +LLDALYC                       NV N+  +P++      LLEQDLF     
Sbjct: 20  FLLDALYCEEERWEEEEEDECLQEEACEKYGNVDNDGIDPSSTLLPLLLLEQDLF----- 74

Query: 481 XXXXXXXXXXXXXXXXXXXXXXFWEDEELVLLFSKEKETHLLINSSNFDIDSSLVLARKE 660
                                  WEDEEL+ LFSKE E    + + N ++D +L +AR++
Sbjct: 75  -----------------------WEDEELLSLFSKE-EQQASLGAGNGEMDGALAVARRQ 110

Query: 661 AVEWMLKVDAHYGFSALTAVLAVNYLDR 744
           AVEWM+KV+AHYGFSA+TA+LA+NYLDR
Sbjct: 111 AVEWMMKVNAHYGFSAVTAILAINYLDR 138


>emb|CAQ03484.1| cyclin D3 [Actinidia deliciosa var. deliciosa]
          Length = 139

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 44/66 (66%), Positives = 55/66 (83%)
 Frame = +1

Query: 547 FWEDEELVLLFSKEKETHLLINSSNFDIDSSLVLARKEAVEWMLKVDAHYGFSALTAVLA 726
           FWEDEEL+ LFSKE+ETH  +N  N   DS+L +ARKEAVEW+L+V+A YGF+ LTA+LA
Sbjct: 44  FWEDEELLSLFSKEQETHTHLNLDN--TDSALSVARKEAVEWILRVNACYGFTPLTAILA 101

Query: 727 VNYLDR 744
           +NYLDR
Sbjct: 102 INYLDR 107


>ref|XP_002310704.1| predicted protein [Populus trichocarpa]
           gi|159025719|emb|CAN88860.1| D3-type cyclin [Populus
           trichocarpa] gi|222853607|gb|EEE91154.1| predicted
           protein [Populus trichocarpa]
          Length = 367

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 44/66 (66%), Positives = 51/66 (77%)
 Frame = +1

Query: 547 FWEDEELVLLFSKEKETHLLINSSNFDIDSSLVLARKEAVEWMLKVDAHYGFSALTAVLA 726
           FWED EL+ L SKEKETH+  +     ID SL++AR+EAVEW L+V AHYGFSALT VLA
Sbjct: 61  FWEDNELLSLISKEKETHVRFDGGG-SIDGSLMVARREAVEWFLRVKAHYGFSALTGVLA 119

Query: 727 VNYLDR 744
           VNY DR
Sbjct: 120 VNYFDR 125