BLASTX nr result
ID: Coptis25_contig00005939
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00005939 (778 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK42243.1| unknown [Medicago truncatula] 228 9e-58 gb|AAZ32896.1| ribosomal protein L32 [Medicago sativa] 227 3e-57 gb|AFK45640.1| unknown [Lotus japonicus] 226 3e-57 gb|ACJ85920.1| unknown [Medicago truncatula] 225 7e-57 ref|XP_002519752.1| 60S ribosomal protein L32, putative [Ricinus... 222 6e-56 >gb|AFK42243.1| unknown [Medicago truncatula] Length = 133 Score = 228 bits (582), Expect = 9e-58 Identities = 112/133 (84%), Positives = 118/133 (88%) Frame = +2 Query: 92 MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 271 MAVPLL PQSDRKICVKQ+WRRPKGIDSRVRRKFKGVTLMPNIGYGS Sbjct: 1 MAVPLLTKKIVKKRVKRFIRPQSDRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60 Query: 272 DKKTRHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVL 451 DKKTRHYLPNGFKKF+VHNV DLE+LMMHNRTYCAEIAHNVST+KRK+IVERAAQLDVV+ Sbjct: 61 DKKTRHYLPNGFKKFVVHNVQDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVV 120 Query: 452 TNKLARLRSQEDE 490 TNKLARLRSQEDE Sbjct: 121 TNKLARLRSQEDE 133 >gb|AAZ32896.1| ribosomal protein L32 [Medicago sativa] Length = 133 Score = 227 bits (578), Expect = 3e-57 Identities = 112/133 (84%), Positives = 117/133 (87%) Frame = +2 Query: 92 MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 271 MAVPLL PQS RKICVKQ+WRRPKGIDSRVRRKFKGVTLMPNIGYGS Sbjct: 1 MAVPLLTKKIVKKRVKRFIRPQSGRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60 Query: 272 DKKTRHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVL 451 DKKTRHYLPNGFKKF+VHNV DLE+LMMHNRTYCAEIAHNVST+KRKEIVERAAQLDVV+ Sbjct: 61 DKKTRHYLPNGFKKFVVHNVQDLELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVV 120 Query: 452 TNKLARLRSQEDE 490 TNKLARLRSQEDE Sbjct: 121 TNKLARLRSQEDE 133 >gb|AFK45640.1| unknown [Lotus japonicus] Length = 133 Score = 226 bits (577), Expect = 3e-57 Identities = 111/133 (83%), Positives = 117/133 (87%) Frame = +2 Query: 92 MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 271 MAVPLL PQSDRKICVKQ+WRRPKGIDSRVRRKFKGVTLMPNIGYGS Sbjct: 1 MAVPLLTKKIIKKRVKRFIRPQSDRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60 Query: 272 DKKTRHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVL 451 DKKTRHYLPNGFKKF+VHNV DLE+LMMHNRTYCAEIAHNVST+KRK+IVERAAQLDVV+ Sbjct: 61 DKKTRHYLPNGFKKFVVHNVKDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVV 120 Query: 452 TNKLARLRSQEDE 490 TNK ARLRSQEDE Sbjct: 121 TNKTARLRSQEDE 133 >gb|ACJ85920.1| unknown [Medicago truncatula] Length = 133 Score = 225 bits (574), Expect = 7e-57 Identities = 111/133 (83%), Positives = 117/133 (87%) Frame = +2 Query: 92 MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 271 MAVPLL PQSDRKICVKQ+WRRPKGIDSRVRRKFKGVTLMPNIGYGS Sbjct: 1 MAVPLLTKKIVKKRVKRFIRPQSDRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60 Query: 272 DKKTRHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVL 451 DKKTRHYL NGFKKF+VHNV DLE+LMMHNRTYCAEIAHNVST+KRK+IVERAAQLDVV+ Sbjct: 61 DKKTRHYLSNGFKKFVVHNVQDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVV 120 Query: 452 TNKLARLRSQEDE 490 TNKLARLRSQEDE Sbjct: 121 TNKLARLRSQEDE 133 >ref|XP_002519752.1| 60S ribosomal protein L32, putative [Ricinus communis] gi|223541169|gb|EEF42725.1| 60S ribosomal protein L32, putative [Ricinus communis] Length = 133 Score = 222 bits (566), Expect = 6e-56 Identities = 110/133 (82%), Positives = 116/133 (87%) Frame = +2 Query: 92 MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 271 MAVPLL PQSDRKI VK+NWRRPKGIDSRVRRKFKG TLMPNIGYGS Sbjct: 1 MAVPLLSKKIVKKRVKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60 Query: 272 DKKTRHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVL 451 DKKTRHYLPNGFKKF+VHNV +LE+LMMHNRTYCAEIAH+VSTKKRKEIVERAAQLDVV+ Sbjct: 61 DKKTRHYLPNGFKKFVVHNVQELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120 Query: 452 TNKLARLRSQEDE 490 TNKLARLRSQEDE Sbjct: 121 TNKLARLRSQEDE 133