BLASTX nr result

ID: Coptis25_contig00005939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005939
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42243.1| unknown [Medicago truncatula]                          228   9e-58
gb|AAZ32896.1| ribosomal protein L32 [Medicago sativa]                227   3e-57
gb|AFK45640.1| unknown [Lotus japonicus]                              226   3e-57
gb|ACJ85920.1| unknown [Medicago truncatula]                          225   7e-57
ref|XP_002519752.1| 60S ribosomal protein L32, putative [Ricinus...   222   6e-56

>gb|AFK42243.1| unknown [Medicago truncatula]
          Length = 133

 Score =  228 bits (582), Expect = 9e-58
 Identities = 112/133 (84%), Positives = 118/133 (88%)
 Frame = +2

Query: 92  MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 271
           MAVPLL              PQSDRKICVKQ+WRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPLLTKKIVKKRVKRFIRPQSDRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 272 DKKTRHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVL 451
           DKKTRHYLPNGFKKF+VHNV DLE+LMMHNRTYCAEIAHNVST+KRK+IVERAAQLDVV+
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVQDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVV 120

Query: 452 TNKLARLRSQEDE 490
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133


>gb|AAZ32896.1| ribosomal protein L32 [Medicago sativa]
          Length = 133

 Score =  227 bits (578), Expect = 3e-57
 Identities = 112/133 (84%), Positives = 117/133 (87%)
 Frame = +2

Query: 92  MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 271
           MAVPLL              PQS RKICVKQ+WRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPLLTKKIVKKRVKRFIRPQSGRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 272 DKKTRHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVL 451
           DKKTRHYLPNGFKKF+VHNV DLE+LMMHNRTYCAEIAHNVST+KRKEIVERAAQLDVV+
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVQDLELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVV 120

Query: 452 TNKLARLRSQEDE 490
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133


>gb|AFK45640.1| unknown [Lotus japonicus]
          Length = 133

 Score =  226 bits (577), Expect = 3e-57
 Identities = 111/133 (83%), Positives = 117/133 (87%)
 Frame = +2

Query: 92  MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 271
           MAVPLL              PQSDRKICVKQ+WRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPLLTKKIIKKRVKRFIRPQSDRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 272 DKKTRHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVL 451
           DKKTRHYLPNGFKKF+VHNV DLE+LMMHNRTYCAEIAHNVST+KRK+IVERAAQLDVV+
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVV 120

Query: 452 TNKLARLRSQEDE 490
           TNK ARLRSQEDE
Sbjct: 121 TNKTARLRSQEDE 133


>gb|ACJ85920.1| unknown [Medicago truncatula]
          Length = 133

 Score =  225 bits (574), Expect = 7e-57
 Identities = 111/133 (83%), Positives = 117/133 (87%)
 Frame = +2

Query: 92  MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 271
           MAVPLL              PQSDRKICVKQ+WRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPLLTKKIVKKRVKRFIRPQSDRKICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 272 DKKTRHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVL 451
           DKKTRHYL NGFKKF+VHNV DLE+LMMHNRTYCAEIAHNVST+KRK+IVERAAQLDVV+
Sbjct: 61  DKKTRHYLSNGFKKFVVHNVQDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVV 120

Query: 452 TNKLARLRSQEDE 490
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133


>ref|XP_002519752.1| 60S ribosomal protein L32, putative [Ricinus communis]
           gi|223541169|gb|EEF42725.1| 60S ribosomal protein L32,
           putative [Ricinus communis]
          Length = 133

 Score =  222 bits (566), Expect = 6e-56
 Identities = 110/133 (82%), Positives = 116/133 (87%)
 Frame = +2

Query: 92  MAVPLLXXXXXXXXXXXXXXPQSDRKICVKQNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 271
           MAVPLL              PQSDRKI VK+NWRRPKGIDSRVRRKFKG TLMPNIGYGS
Sbjct: 1   MAVPLLSKKIVKKRVKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 272 DKKTRHYLPNGFKKFLVHNVSDLEILMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVL 451
           DKKTRHYLPNGFKKF+VHNV +LE+LMMHNRTYCAEIAH+VSTKKRKEIVERAAQLDVV+
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVQELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 452 TNKLARLRSQEDE 490
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133


Top