BLASTX nr result

ID: Coptis25_contig00005938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005938
         (1521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285369.1| PREDICTED: uncharacterized protein LOC100253...   548   e-153
ref|NP_001240150.1| uncharacterized protein LOC100784991 [Glycin...   509   e-142
ref|XP_003543672.1| PREDICTED: uncharacterized protein LOC100781...   508   e-141
ref|XP_004152213.1| PREDICTED: uncharacterized protein LOC101217...   504   e-140
ref|XP_003597836.1| Lys-63-specific deubiquitinase BRCC36 [Medic...   490   e-136

>ref|XP_002285369.1| PREDICTED: uncharacterized protein LOC100253140 [Vitis vinifera]
          Length = 437

 Score =  548 bits (1412), Expect = e-153
 Identities = 287/435 (65%), Positives = 329/435 (75%), Gaps = 4/435 (0%)
 Frame = +3

Query: 54   MSLTNVKMSEEVWFTCVTHALSTETEEIMGLLLGDIQQSNNGTATALIWGASPQTRSDRR 233
            MSLT VKMSE+VW TC THALSTETEEIMGLLLGDI+ S NG+ TALIWGASPQTRSDRR
Sbjct: 1    MSLTCVKMSEDVWLTCTTHALSTETEEIMGLLLGDIEYSKNGSVTALIWGASPQTRSDRR 60

Query: 234  KDRVETNPEQLAAATAQAERMTQTTGKRTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLE 413
            KDRVETNPEQLAAA+AQAERMT  TGK TRVIGWYHSHPHITVLPSHVDVRTQAMYQLL+
Sbjct: 61   KDRVETNPEQLAAASAQAERMTVATGKTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD 120

Query: 414  SGFIGLIFSCFSEDAFKVGRIQVTAFQSSDGRQKHMAGTXXXXXXXXXXXXXXXXXXXXX 593
            SGFIGLIFSCFSEDA KVGRIQV AFQS+DG+Q +M+                       
Sbjct: 121  SGFIGLIFSCFSEDAQKVGRIQVIAFQSTDGKQSNMSRPISLSPVHRSSIIDVESSFSSS 180

Query: 594  XXXXXXXXXGRKDSLEQDTGDSRTTSGSVKGGGRSSDLEGLFAHADVNYLSRDGAGENFE 773
                      R +S EQDTGDSRT +   KGGGRSSDL G FA+AD NYL RD  G N+ 
Sbjct: 181  ENAPAKSGPARVESSEQDTGDSRTMALVNKGGGRSSDLGGFFANADANYLGRDKMGGNYH 240

Query: 774  SGSLQSSVIDINPIDMTESMQEAMHRSNLEISGAEYVRKEIXXXXXXXXXXXXXXXXXXX 953
            + + +++V+D++P+DM+ESMQEAMHRSNL++SGAEYVRKE+                   
Sbjct: 241  TNNSENAVVDVDPMDMSESMQEAMHRSNLDMSGAEYVRKEVPLLVFPTLSLLKLDSPLTS 300

Query: 954  FTELQHVLFEEEREAYNQAILQNMRDEKVHPLAFIHHTSTYQASMCKLMEYCLSPAISAL 1133
            FT+LQ VL+EEER AYNQAI+QNMRD KVHPLAFIHHTSTYQASMCKLMEYCLSPAI+AL
Sbjct: 301  FTDLQRVLYEEERAAYNQAIVQNMRDGKVHPLAFIHHTSTYQASMCKLMEYCLSPAINAL 360

Query: 1134 QGRLKENEIRLAMLTDEAK--KFEALRGNESSMVSPRSSPTYGPRGGAALSQKDLYPAAD 1307
            Q RLKENEIRLA+LTDEA+  + EA +G+ESS  SPR+  ++G RG A+   +DLYPA  
Sbjct: 361  QDRLKENEIRLAILTDEARTLETEAFKGSESSSGSPRNFQSHGIRGSASFGHRDLYPAES 420

Query: 1308 SS--GVRSPGTGSRR 1346
             +   V  PG+ SRR
Sbjct: 421  INLRSVAGPGSRSRR 435


>ref|NP_001240150.1| uncharacterized protein LOC100784991 [Glycine max]
            gi|255635958|gb|ACU18325.1| unknown [Glycine max]
          Length = 436

 Score =  509 bits (1311), Expect = e-142
 Identities = 270/436 (61%), Positives = 323/436 (74%), Gaps = 5/436 (1%)
 Frame = +3

Query: 54   MSLTNVKMSEEVWFTCVTHALSTETEEIMGLLLGDIQQSNNGTATALIWGASPQTRSDRR 233
            MSLT+V MSEEVW +CVTHALSTETEEIMGLLLGDI+ S NG+ TALIWGASPQTRSDRR
Sbjct: 1    MSLTSVTMSEEVWLSCVTHALSTETEEIMGLLLGDIKHSKNGSVTALIWGASPQTRSDRR 60

Query: 234  KDRVETNPEQLAAATAQAERMTQTTGKRTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLE 413
            KDRVETNPEQLAAA+A A+RMT +TG+ TRVIGWYHSHPHITVLPSHVDVRTQAMYQLL+
Sbjct: 61   KDRVETNPEQLAAASALADRMTTSTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD 120

Query: 414  SGFIGLIFSCFSEDAFKVGRIQVTAFQSSDGRQKHMAGTXXXXXXXXXXXXXXXXXXXXX 593
            SGFIGLIFSC+SED  KVGRIQV AFQSSDG+Q H +                       
Sbjct: 121  SGFIGLIFSCYSEDVNKVGRIQVIAFQSSDGKQNHRSRPIPLSPVNRSPVIDIDSSPSSS 180

Query: 594  XXXXXXXXXGRKDSLEQDTGDSRTTSGSVKGGGRSSDLEGLFAHADVNYLSRDGAGENFE 773
                        ++ EQDTGDSR+   S K GGR SDL   FA+AD NYL RD +G N+ 
Sbjct: 181  ENVSTKPGYFEAENAEQDTGDSRSVVVS-KDGGR-SDLGNFFANADANYLGRDKSGGNYH 238

Query: 774  SGSLQSSVIDINPIDMTESMQEAMHRSNLEISGAEYVRKEIXXXXXXXXXXXXXXXXXXX 953
              +  ++++D++P+DM+ESMQEAMHRSNL++SGAE+VRKEI                   
Sbjct: 239  PNNSDTNIVDVDPMDMSESMQEAMHRSNLDMSGAEFVRKEIPLYVLPALSLINLDSPLSS 298

Query: 954  FTELQHVLFEEEREAYNQAILQNMRDEKVHPLAFIHHTSTYQASMCKLMEYCLSPAISAL 1133
            +T+LQHVLFEEE+ AYNQAILQNMRD KVHPL FIHHTSTYQAS+CKL+EYCLSPAI+AL
Sbjct: 299  YTDLQHVLFEEEQNAYNQAILQNMRDGKVHPLTFIHHTSTYQASLCKLIEYCLSPAINAL 358

Query: 1134 QGRLKENEIRLAMLTDEAKKF--EALRGNESSMVSPRSSPTYGPRGGAALSQKDLYPAAD 1307
            Q RL+ENEIRLA+L++EAK    EA RG+E+S+ SPR   +   RGG++   ++L+ + +
Sbjct: 359  QDRLRENEIRLAVLSEEAKSLEAEAYRGSEASVGSPRRVASPVHRGGSSPGLRNLHDSPE 418

Query: 1308 SSG---VRSPGTGSRR 1346
            S G   V SPG+ SR+
Sbjct: 419  SLGSRNVASPGSRSRK 434


>ref|XP_003543672.1| PREDICTED: uncharacterized protein LOC100781761 [Glycine max]
          Length = 436

 Score =  508 bits (1309), Expect = e-141
 Identities = 270/436 (61%), Positives = 322/436 (73%), Gaps = 5/436 (1%)
 Frame = +3

Query: 54   MSLTNVKMSEEVWFTCVTHALSTETEEIMGLLLGDIQQSNNGTATALIWGASPQTRSDRR 233
            MSLT+VKMSEEVW +CVTHALSTETEEIMGLLLGDIQ S NG+ TALIWGASPQTRSDRR
Sbjct: 1    MSLTSVKMSEEVWLSCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 60

Query: 234  KDRVETNPEQLAAATAQAERMTQTTGKRTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLE 413
            KDRVETNPEQLAAA+A A+RMT +TG+ TRVIGWYHSHPHITVLPSHVDVRTQAMYQLL+
Sbjct: 61   KDRVETNPEQLAAASALADRMTTSTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD 120

Query: 414  SGFIGLIFSCFSEDAFKVGRIQVTAFQSSDGRQKHMAGTXXXXXXXXXXXXXXXXXXXXX 593
            SGFIGLIFSC+SED  KVGRIQV AFQSSDG+  HM+                       
Sbjct: 121  SGFIGLIFSCYSEDVNKVGRIQVIAFQSSDGKHNHMSRPVPLSPVNRSPVIDIDSSPSSS 180

Query: 594  XXXXXXXXXGRKDSLEQDTGDSRTTSGSVKGGGRSSDLEGLFAHADVNYLSRDGAGENFE 773
                      + ++ EQDTGDSR+   S K GGR SDL   FA+AD NYL RD +G N+ 
Sbjct: 181  ENVSTRPGYFKAENAEQDTGDSRSVVVS-KDGGR-SDLGNFFANADANYLGRDKSGGNYH 238

Query: 774  SGSLQSSVIDINPIDMTESMQEAMHRSNLEISGAEYVRKEIXXXXXXXXXXXXXXXXXXX 953
              +  ++++D++ +DM+ESMQEAMHRSNL++SGAE+VRKEI                   
Sbjct: 239  PNNSDTNIVDVDAMDMSESMQEAMHRSNLDMSGAEFVRKEIPLYVLPALSLINIDSPLSS 298

Query: 954  FTELQHVLFEEEREAYNQAILQNMRDEKVHPLAFIHHTSTYQASMCKLMEYCLSPAISAL 1133
            +T+LQHVLFEEER AYNQAILQN RD KVHPL FIHHTSTYQAS+CKL+EYCLSPAI+AL
Sbjct: 299  YTDLQHVLFEEERNAYNQAILQNKRDGKVHPLTFIHHTSTYQASLCKLIEYCLSPAINAL 358

Query: 1134 QGRLKENEIRLAMLTDEAKKF--EALRGNESSMVSPRSSPTYGPRGGAALSQKDLYPAAD 1307
            Q RL+ENEIRLA+L +EAK    EA RG+E+S+ +PR   +   RGG++   ++L+ + +
Sbjct: 359  QDRLRENEIRLAVLREEAKSLEAEAYRGSEASVGTPRRVASPVHRGGSSPGLRNLHDSPE 418

Query: 1308 SSG---VRSPGTGSRR 1346
            S G   V SPG+ SR+
Sbjct: 419  SLGSRNVASPGSRSRK 434


>ref|XP_004152213.1| PREDICTED: uncharacterized protein LOC101217628 [Cucumis sativus]
          Length = 436

 Score =  504 bits (1297), Expect = e-140
 Identities = 267/433 (61%), Positives = 313/433 (72%), Gaps = 2/433 (0%)
 Frame = +3

Query: 54   MSLTNVKMSEEVWFTCVTHALSTETEEIMGLLLGDIQQSNNGTATALIWGASPQTRSDRR 233
            MSLT VKMSE+VWFTC+THALSTETEEIMGLLLGDI+ S NG+ TALIWGASPQTRSDRR
Sbjct: 1    MSLTAVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60

Query: 234  KDRVETNPEQLAAATAQAERMTQTTGKRTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLE 413
            KDRVET+PEQLAAA+AQAERMT  TG+ TRVIGWYHSHPHITVLPSHVDVRTQ  YQLL+
Sbjct: 61   KDRVETHPEQLAAASAQAERMTAMTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120

Query: 414  SGFIGLIFSCFSEDAFKVGRIQVTAFQSSDGRQKHMAGTXXXXXXXXXXXXXXXXXXXXX 593
            SGFIGLIFSCFSEDA KVGRIQV AFQSSDG+Q H++                       
Sbjct: 121  SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS 180

Query: 594  XXXXXXXXXGRKDSLEQDTGDSRTTSGSVKGGGRSSDLEGLFAHADVNYLSRDGAGENFE 773
                     G  ++ EQDTGDS   +G++KG GRSS+L   FA+AD NY  ++  G ++ 
Sbjct: 181  DNVSGNVGYGPGENPEQDTGDS-MIAGALKGTGRSSELGYFFANADTNYQGKEKIGGSYL 239

Query: 774  SGSLQSSVIDINPIDMTESMQEAMHRSNLEISGAEYVRKEIXXXXXXXXXXXXXXXXXXX 953
              +  S + DI+P+D++ESMQEAMHRSN+E+S AE+ RKEI                   
Sbjct: 240  INNTNSGITDIDPMDLSESMQEAMHRSNIEMSAAEFSRKEIPLHVMPTASLIKLDSPLTS 299

Query: 954  FTELQHVLFEEEREAYNQAILQNMRDEKVHPLAFIHHTSTYQASMCKLMEYCLSPAISAL 1133
            FT+LQHVLFEEER AYNQAI  NM+D KVHPL FIHHTSTYQASMCKL+EYCLSPAISAL
Sbjct: 300  FTDLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISAL 359

Query: 1134 QGRLKENEIRLAMLTDEAK--KFEALRGNESSMVSPRSSPTYGPRGGAALSQKDLYPAAD 1307
            Q R+KENEIRLA+L +EA+  + EA + NES   SP    T+G R  A+ + +DLYP+  
Sbjct: 360  QDRVKENEIRLALLAEEARNLEVEAAKANESVPGSPH-QVTHGSRASASPTHRDLYPSTA 418

Query: 1308 SSGVRSPGTGSRR 1346
            S G RS G+   R
Sbjct: 419  SVGARSGGSSMYR 431


>ref|XP_003597836.1| Lys-63-specific deubiquitinase BRCC36 [Medicago truncatula]
            gi|355486884|gb|AES68087.1| Lys-63-specific
            deubiquitinase BRCC36 [Medicago truncatula]
          Length = 443

 Score =  490 bits (1262), Expect = e-136
 Identities = 272/447 (60%), Positives = 321/447 (71%), Gaps = 16/447 (3%)
 Frame = +3

Query: 54   MSLTNVKMSEEVWFTCVTHALSTETEEIMGLLLGDIQQSNNGTATALIWGASPQTRSDRR 233
            MSLT+VKMSEEVW TC THA STETEEIMGLLLGDIQ S NG+ TALIWGASPQTRSDRR
Sbjct: 1    MSLTSVKMSEEVWLTCATHAFSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 60

Query: 234  KDRVETNPEQLAAATAQAERMTQTTGKRTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLE 413
            KDRVETNPEQLAAA+A   +MT TTG+ TRVIGWYHSHPHITVLPSHVDVRTQAMYQLL+
Sbjct: 61   KDRVETNPEQLAAASA-LHKMTVTTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD 119

Query: 414  SGFIGLIFSCFSEDAFKVGRIQVTAFQSSDGRQKHMAGTXXXXXXXXXXXXXXXXXXXXX 593
            SGFIGLIFSC++EDA K+G+IQV AFQSSDG+Q  M+                       
Sbjct: 120  SGFIGLIFSCYNEDANKIGKIQVIAFQSSDGKQNSMSRPIPLSPVNKSSIIHIDSSPSSS 179

Query: 594  XXXXXXXXXGRKDSLEQDTGDSRTTSGSVKGGGRSSDLEGLFAHADVNYLSRDGAGENFE 773
                      + DS EQDTGDSR ++G+ KGGGRSS+L   FA+AD NYL     GEN+ 
Sbjct: 180  ENLTTRSGYFKGDSPEQDTGDSR-SAGASKGGGRSSELGNFFANADANYLGSVKDGENYH 238

Query: 774  SGSLQSSVIDINPIDMTESMQEAMHRSNLEISGAEYVRKEIXXXXXXXXXXXXXXXXXXX 953
              +     +D +P+DM+ESMQEAMHRSNL++SGAEYVRKEI                   
Sbjct: 239  LNNSDIIAVD-DPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPSLSFINLDSPLSS 297

Query: 954  FTELQHVLFEEEREAYNQAILQNMR-DEKVHPLAFIHHTSTYQASMCKLMEYCLSPAISA 1130
            +T+LQHVLFEEER AYNQAILQN R D KVHPL FIHHTSTYQAS+CKL+EYCLSPAI+A
Sbjct: 298  YTDLQHVLFEEERTAYNQAILQNTRWDGKVHPLTFIHHTSTYQASLCKLIEYCLSPAINA 357

Query: 1131 LQGRLKENEIRLAMLTDEAKKFEA----LRGNESSMVSPR--------SSPTYGPRGGAA 1274
            LQ RL+ENEIRLA+L++EAK  EA     RG+E+S+ SPR        +SP +  RG ++
Sbjct: 358  LQDRLRENEIRLAVLSEEAKSLEAEASTSRGSEASLGSPRQVASPRQVASPIH--RGSSS 415

Query: 1275 LSQKDLYPAADSSG---VRSPGTGSRR 1346
              Q++   +++S G   V SPG+ SR+
Sbjct: 416  PRQRNSQSSSESLGSKSVASPGSRSRK 442


Top