BLASTX nr result

ID: Coptis25_contig00005932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005932
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870927.1| predicted protein [Arabidopsis lyrata subsp....    59   4e-07
ref|NP_568088.1| uncharacterized protein [Arabidopsis thaliana] ...    59   5e-07
gb|AAM65026.1| unknown [Arabidopsis thaliana]                          58   9e-07
ref|XP_003529164.1| PREDICTED: uncharacterized protein LOC100786...    55   6e-06
gb|ACU19164.1| unknown [Glycine max]                                   55   6e-06

>ref|XP_002870927.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316764|gb|EFH47186.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 72

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/78 (42%), Positives = 43/78 (55%)
 Frame = +3

Query: 93  MVGGGTLLQRAXXXXXXXXXXXXLANSHAFQRFAVRTSKGLENVSKRLGDVSQLAEQKKQ 272
           M GGG  + R             LANSHAFQRFAVRTSK +EN+SK       +A + ++
Sbjct: 1   MAGGGNFIARVISYVANEFIVNGLANSHAFQRFAVRTSKRIENLSK-------MAAENRE 53

Query: 273 EAAGFLEYVTKTFDSSKK 326
           + A  +E  +K  DS KK
Sbjct: 54  KVAQHMEEFSKNMDSMKK 71


>ref|NP_568088.1| uncharacterized protein [Arabidopsis thaliana]
           gi|14030733|gb|AAK53041.1|AF375457_1 AT5g01350/T10O8_60
           [Arabidopsis thaliana] gi|15010720|gb|AAK74019.1|
           AT5g01350/T10O8_60 [Arabidopsis thaliana]
           gi|16974531|gb|AAL31175.1| AT5g01350/T10O8_60
           [Arabidopsis thaliana] gi|110741284|dbj|BAF02192.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332002947|gb|AED90330.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 72

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/78 (42%), Positives = 43/78 (55%)
 Frame = +3

Query: 93  MVGGGTLLQRAXXXXXXXXXXXXLANSHAFQRFAVRTSKGLENVSKRLGDVSQLAEQKKQ 272
           M GGG  + R             LANSHAFQRFAVRTSK +EN+SK       +A + ++
Sbjct: 1   MAGGGNFIARVISYVANEFIVNGLANSHAFQRFAVRTSKRIENLSK-------MAAENRE 53

Query: 273 EAAGFLEYVTKTFDSSKK 326
           + A  +E   K  DS+KK
Sbjct: 54  KVAQQMEEFAKNIDSTKK 71


>gb|AAM65026.1| unknown [Arabidopsis thaliana]
          Length = 72

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/78 (42%), Positives = 43/78 (55%)
 Frame = +3

Query: 93  MVGGGTLLQRAXXXXXXXXXXXXLANSHAFQRFAVRTSKGLENVSKRLGDVSQLAEQKKQ 272
           M GGG  + R             LANSHAFQRFAVRTSK +EN+SK       LA + ++
Sbjct: 1   MAGGGNFIARVISYVANEFIVNGLANSHAFQRFAVRTSKRIENLSK-------LAAENRE 53

Query: 273 EAAGFLEYVTKTFDSSKK 326
           + A  +E   K  +S+KK
Sbjct: 54  KVAQQMEEFAKNIESTKK 71


>ref|XP_003529164.1| PREDICTED: uncharacterized protein LOC100786388 [Glycine max]
          Length = 72

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/77 (42%), Positives = 42/77 (54%)
 Frame = +3

Query: 93  MVGGGTLLQRAXXXXXXXXXXXXLANSHAFQRFAVRTSKGLENVSKRLGDVSQLAEQKKQ 272
           M GG   +QR             LANS AFQRFAVRT       SKR+GD+S  A QK+Q
Sbjct: 1   MAGGANFVQRVLSYVVNEVVVNGLANSPAFQRFAVRT-------SKRIGDISNKAVQKRQ 53

Query: 273 EAAGFLEYVTKTFDSSK 323
           E A  ++ ++K  +S K
Sbjct: 54  ELAEQIKDISKNMESFK 70


>gb|ACU19164.1| unknown [Glycine max]
          Length = 72

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/77 (42%), Positives = 42/77 (54%)
 Frame = +3

Query: 93  MVGGGTLLQRAXXXXXXXXXXXXLANSHAFQRFAVRTSKGLENVSKRLGDVSQLAEQKKQ 272
           M GG   +QR             LANS AFQRFAVRT       SKR+GD+S  A QK+Q
Sbjct: 1   MAGGANFVQRVLSYVVNEVVVNGLANSPAFQRFAVRT-------SKRIGDISNKAVQKRQ 53

Query: 273 EAAGFLEYVTKTFDSSK 323
           E A  ++ ++K  +S K
Sbjct: 54  ELAEQIKDISKNMESFK 70


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