BLASTX nr result
ID: Coptis25_contig00005932
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00005932 (394 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002870927.1| predicted protein [Arabidopsis lyrata subsp.... 59 4e-07 ref|NP_568088.1| uncharacterized protein [Arabidopsis thaliana] ... 59 5e-07 gb|AAM65026.1| unknown [Arabidopsis thaliana] 58 9e-07 ref|XP_003529164.1| PREDICTED: uncharacterized protein LOC100786... 55 6e-06 gb|ACU19164.1| unknown [Glycine max] 55 6e-06 >ref|XP_002870927.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297316764|gb|EFH47186.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 72 Score = 58.9 bits (141), Expect = 4e-07 Identities = 33/78 (42%), Positives = 43/78 (55%) Frame = +3 Query: 93 MVGGGTLLQRAXXXXXXXXXXXXLANSHAFQRFAVRTSKGLENVSKRLGDVSQLAEQKKQ 272 M GGG + R LANSHAFQRFAVRTSK +EN+SK +A + ++ Sbjct: 1 MAGGGNFIARVISYVANEFIVNGLANSHAFQRFAVRTSKRIENLSK-------MAAENRE 53 Query: 273 EAAGFLEYVTKTFDSSKK 326 + A +E +K DS KK Sbjct: 54 KVAQHMEEFSKNMDSMKK 71 >ref|NP_568088.1| uncharacterized protein [Arabidopsis thaliana] gi|14030733|gb|AAK53041.1|AF375457_1 AT5g01350/T10O8_60 [Arabidopsis thaliana] gi|15010720|gb|AAK74019.1| AT5g01350/T10O8_60 [Arabidopsis thaliana] gi|16974531|gb|AAL31175.1| AT5g01350/T10O8_60 [Arabidopsis thaliana] gi|110741284|dbj|BAF02192.1| hypothetical protein [Arabidopsis thaliana] gi|332002947|gb|AED90330.1| uncharacterized protein [Arabidopsis thaliana] Length = 72 Score = 58.5 bits (140), Expect = 5e-07 Identities = 33/78 (42%), Positives = 43/78 (55%) Frame = +3 Query: 93 MVGGGTLLQRAXXXXXXXXXXXXLANSHAFQRFAVRTSKGLENVSKRLGDVSQLAEQKKQ 272 M GGG + R LANSHAFQRFAVRTSK +EN+SK +A + ++ Sbjct: 1 MAGGGNFIARVISYVANEFIVNGLANSHAFQRFAVRTSKRIENLSK-------MAAENRE 53 Query: 273 EAAGFLEYVTKTFDSSKK 326 + A +E K DS+KK Sbjct: 54 KVAQQMEEFAKNIDSTKK 71 >gb|AAM65026.1| unknown [Arabidopsis thaliana] Length = 72 Score = 57.8 bits (138), Expect = 9e-07 Identities = 33/78 (42%), Positives = 43/78 (55%) Frame = +3 Query: 93 MVGGGTLLQRAXXXXXXXXXXXXLANSHAFQRFAVRTSKGLENVSKRLGDVSQLAEQKKQ 272 M GGG + R LANSHAFQRFAVRTSK +EN+SK LA + ++ Sbjct: 1 MAGGGNFIARVISYVANEFIVNGLANSHAFQRFAVRTSKRIENLSK-------LAAENRE 53 Query: 273 EAAGFLEYVTKTFDSSKK 326 + A +E K +S+KK Sbjct: 54 KVAQQMEEFAKNIESTKK 71 >ref|XP_003529164.1| PREDICTED: uncharacterized protein LOC100786388 [Glycine max] Length = 72 Score = 55.1 bits (131), Expect = 6e-06 Identities = 33/77 (42%), Positives = 42/77 (54%) Frame = +3 Query: 93 MVGGGTLLQRAXXXXXXXXXXXXLANSHAFQRFAVRTSKGLENVSKRLGDVSQLAEQKKQ 272 M GG +QR LANS AFQRFAVRT SKR+GD+S A QK+Q Sbjct: 1 MAGGANFVQRVLSYVVNEVVVNGLANSPAFQRFAVRT-------SKRIGDISNKAVQKRQ 53 Query: 273 EAAGFLEYVTKTFDSSK 323 E A ++ ++K +S K Sbjct: 54 ELAEQIKDISKNMESFK 70 >gb|ACU19164.1| unknown [Glycine max] Length = 72 Score = 55.1 bits (131), Expect = 6e-06 Identities = 33/77 (42%), Positives = 42/77 (54%) Frame = +3 Query: 93 MVGGGTLLQRAXXXXXXXXXXXXLANSHAFQRFAVRTSKGLENVSKRLGDVSQLAEQKKQ 272 M GG +QR LANS AFQRFAVRT SKR+GD+S A QK+Q Sbjct: 1 MAGGANFVQRVLSYVVNEVVVNGLANSPAFQRFAVRT-------SKRIGDISNKAVQKRQ 53 Query: 273 EAAGFLEYVTKTFDSSK 323 E A ++ ++K +S K Sbjct: 54 ELAEQIKDISKNMESFK 70