BLASTX nr result

ID: Coptis25_contig00005929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005929
         (1304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285797.1| PREDICTED: uncharacterized protein LOC100260...   392   e-107
ref|XP_002531253.1| conserved hypothetical protein [Ricinus comm...   375   e-101
ref|XP_004143468.1| PREDICTED: uncharacterized protein LOC101209...   370   e-100
ref|XP_002285796.1| PREDICTED: uncharacterized protein LOC100260...   369   e-100
ref|XP_002310565.1| predicted protein [Populus trichocarpa] gi|1...   365   2e-98

>ref|XP_002285797.1| PREDICTED: uncharacterized protein LOC100260886 isoform 2 [Vitis
           vinifera]
          Length = 304

 Score =  392 bits (1008), Expect = e-107
 Identities = 212/313 (67%), Positives = 238/313 (76%), Gaps = 2/313 (0%)
 Frame = +2

Query: 41  MERVTPVRKIHTNTADLLTWSENPXXXXXXXXXXXXXXXXXRCSTIRSHQPSDKISKVLF 220
           ME+ TPVRK HT+TADLLTWSE P                     +RSHQPSD ISKV+F
Sbjct: 1   MEKATPVRKPHTSTADLLTWSETPPADSPASASRP---------AVRSHQPSDGISKVVF 51

Query: 221 GGQLTEEEAESF-KRKPCSGHKMKEMTGSGIXXXXXXXXXXXXXXXXQG-SNKTGLRVYQ 394
           GGQ+T+EEAE+  KRKPCSG+K+KE+TGSGI                   +NKT +R+YQ
Sbjct: 52  GGQVTDEEAEALSKRKPCSGYKLKEITGSGIFALEGENGTSESGSANPTPNNKTTVRIYQ 111

Query: 395 QALNGISQISFSTEEKVSPKKPTSLPEVAKQRELSGTLESEDAKMKKQLSDAKYKELSGQ 574
           QA   ISQISF TEE VSPKKPT+LPEVAKQRELSGTLESE+ KM+KQLSDAK KELSG 
Sbjct: 112 QAAAAISQISFGTEESVSPKKPTTLPEVAKQRELSGTLESEETKMQKQLSDAKCKELSGH 171

Query: 575 DIFGXXXXXXXXXLAARNLELKGSIDMGEPAPRNVRTSVKVSNPSGGQSNIVFSEESPVK 754
           DIF           AAR+L LK S DMGEPAPRNVRTSVKVSNP+GGQSNI+FS+E+ +K
Sbjct: 172 DIFAPPPEILPRPSAARSLVLKESKDMGEPAPRNVRTSVKVSNPAGGQSNIMFSDETVLK 231

Query: 755 TAKKIHNQKFQELTGNDIFKGDAPPGSAEKPLSVAKLREISGSDIFADGKAANRDYLGGV 934
           TAKKIHNQKF ELTGNDIFKGD PP SAEK LS+AKLRE+SG+DIFADGKA +RDYLGGV
Sbjct: 232 TAKKIHNQKFVELTGNDIFKGDVPPSSAEKSLSMAKLREMSGNDIFADGKAESRDYLGGV 291

Query: 935 RKPPGGESSIALV 973
           RKPPGGESSIALV
Sbjct: 292 RKPPGGESSIALV 304


>ref|XP_002531253.1| conserved hypothetical protein [Ricinus communis]
           gi|223529138|gb|EEF31117.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 300

 Score =  375 bits (962), Expect = e-101
 Identities = 204/314 (64%), Positives = 237/314 (75%), Gaps = 3/314 (0%)
 Frame = +2

Query: 41  MERVTPVRKIHTNTADLLTWSENPXXXXXXXXXXXXXXXXXRCSTIRSHQPSDKISKVLF 220
           MER TPVR  H++T+DLLTW+E P                   +T RSHQPSD+ISKVL 
Sbjct: 1   MERSTPVRNPHSSTSDLLTWNEAPPPQSPASAS----------TTHRSHQPSDRISKVLS 50

Query: 221 GGQLTEEEAESF-KRKPCSGHKMKEMTGSGIXXXXXXXXXXXXXXXXQGSNKTGLRVYQQ 397
           GGQL++EEA+SF K+KPCSG+K+KEM GSGI                  +NKT +R+ QQ
Sbjct: 51  GGQLSDEEAQSFLKKKPCSGYKLKEMNGSGIFAGNGGDDASHS----SAANKTSVRICQQ 106

Query: 398 ALNGISQISFSTEEKVSPKKPTSLPEVAKQRELSGTLESE-DAKMKKQLSDAKYKELSGQ 574
           A+NGISQISFSTEE +SPKKPTSLPEVAKQRELSGTL+SE D K KKQ+S+AK+KE+SG 
Sbjct: 107 AMNGISQISFSTEESISPKKPTSLPEVAKQRELSGTLQSEADLKNKKQISNAKFKEISGH 166

Query: 575 DIFGXXXXXXXXXLAA-RNLELKGSIDMGEPAPRNVRTSVKVSNPSGGQSNIVFSEESPV 751
           DIF          LAA R LE K + DM +PAPRN+RTSVKVSNP+GGQSNI+F E+   
Sbjct: 167 DIFAPSPDISTRSLAAARTLESKENKDMEKPAPRNIRTSVKVSNPAGGQSNILFGEDPVT 226

Query: 752 KTAKKIHNQKFQELTGNDIFKGDAPPGSAEKPLSVAKLREISGSDIFADGKAANRDYLGG 931
           +TAKKIHNQKFQELTGNDIFKGD PPGSAEKPLS AKL+EISGS+IFADGK+ +RDY  G
Sbjct: 227 RTAKKIHNQKFQELTGNDIFKGDVPPGSAEKPLSNAKLKEISGSNIFADGKSESRDYFRG 286

Query: 932 VRKPPGGESSIALV 973
           VRKPPGGESSIALV
Sbjct: 287 VRKPPGGESSIALV 300


>ref|XP_004143468.1| PREDICTED: uncharacterized protein LOC101209377 [Cucumis sativus]
           gi|449504822|ref|XP_004162304.1| PREDICTED:
           uncharacterized protein LOC101230134 [Cucumis sativus]
          Length = 299

 Score =  370 bits (950), Expect = e-100
 Identities = 205/314 (65%), Positives = 234/314 (74%), Gaps = 3/314 (0%)
 Frame = +2

Query: 41  MERVTPVRKIHTNTADLLTWSENPXXXXXXXXXXXXXXXXXRCSTIRSHQPSDKISKVLF 220
           M+R     K   +TADLLTWSE P                   S  RSHQPSD+ISKVL 
Sbjct: 1   MDRTKSSSKSRPSTADLLTWSELPHPESSPAVS---------ASAPRSHQPSDRISKVLQ 51

Query: 221 GGQLTEEEAESF-KRKPCSGHKMKEMTGSGIXXXXXXXXXXXXXXXXQGSNKTGLRVYQQ 397
           GGQLT+EEAE+  K+K CSG+KMKEM+GSGI                   NKTGLR+YQQ
Sbjct: 52  GGQLTDEEAETLMKKKNCSGYKMKEMSGSGIFASNDEGDESEL------DNKTGLRMYQQ 105

Query: 398 ALNGISQISFSTEEKVSPKKPTSLPEVAKQRELSGTLESE-DAKMKKQLSDAKYKELSGQ 574
            LNG+SQISF+TEE +SPKKPTS+PEVAKQRELSGTL+S+ DA+ KKQ+SDAK KELSG 
Sbjct: 106 TLNGVSQISFATEEGLSPKKPTSIPEVAKQRELSGTLQSDPDARSKKQISDAKNKELSGH 165

Query: 575 DIFGXXXXXXXXXLAA-RNLELKGSIDMGEPAPRNVRTSVKVSNPSGGQSNIVFSEESPV 751
           DIFG         LAA R+LE K S DMGEPAPR +RTSVKVSNP+GGQSNI+F EE  +
Sbjct: 166 DIFGAPPEITPRSLAAARSLESKESKDMGEPAPRTLRTSVKVSNPAGGQSNILFGEEPVM 225

Query: 752 KTAKKIHNQKFQELTGNDIFKGDAPPGSAEKPLSVAKLREISGSDIFADGKAANRDYLGG 931
           KTAKK+HNQKFQELTGNDIFKGDAPPG++EK LS AKLRE+SG+DIFADGKA +RDY GG
Sbjct: 226 KTAKKLHNQKFQELTGNDIFKGDAPPGASEKSLSSAKLREMSGNDIFADGKAESRDYFGG 285

Query: 932 VRKPPGGESSIALV 973
           VRKPPGGES+IALV
Sbjct: 286 VRKPPGGESTIALV 299


>ref|XP_002285796.1| PREDICTED: uncharacterized protein LOC100260886 isoform 1 [Vitis
           vinifera] gi|147861247|emb|CAN81471.1| hypothetical
           protein VITISV_020507 [Vitis vinifera]
           gi|302141947|emb|CBI19150.3| unnamed protein product
           [Vitis vinifera]
          Length = 295

 Score =  369 bits (947), Expect = e-100
 Identities = 203/313 (64%), Positives = 229/313 (73%), Gaps = 2/313 (0%)
 Frame = +2

Query: 41  MERVTPVRKIHTNTADLLTWSENPXXXXXXXXXXXXXXXXXRCSTIRSHQPSDKISKVLF 220
           ME+ TPVRK HT+TADLLTWSE P                     +RSHQPSD ISKV+F
Sbjct: 1   MEKATPVRKPHTSTADLLTWSETPPADSPASASRP---------AVRSHQPSDGISKVVF 51

Query: 221 GGQLTEEEAESF-KRKPCSGHKMKEMTGSGIXXXXXXXXXXXXXXXXQG-SNKTGLRVYQ 394
           GGQ+T+EEAE+  KRKPCSG+K+KE+TGSGI                   +NKT +R+YQ
Sbjct: 52  GGQVTDEEAEALSKRKPCSGYKLKEITGSGIFALEGENGTSESGSANPTPNNKTTVRIYQ 111

Query: 395 QALNGISQISFSTEEKVSPKKPTSLPEVAKQRELSGTLESEDAKMKKQLSDAKYKELSGQ 574
           QA   ISQISF TEE VSPKKPT+LPEVAKQRELSGTLESE+ KM+KQLSDAK KELSG 
Sbjct: 112 QAAAAISQISFGTEESVSPKKPTTLPEVAKQRELSGTLESEETKMQKQLSDAKCKELSGH 171

Query: 575 DIFGXXXXXXXXXLAARNLELKGSIDMGEPAPRNVRTSVKVSNPSGGQSNIVFSEESPVK 754
           DIF           AAR+L LK S DMGEPAPRN         P+GGQSNI+FS+E+ +K
Sbjct: 172 DIFAPPPEILPRPSAARSLVLKESKDMGEPAPRN---------PAGGQSNIMFSDETVLK 222

Query: 755 TAKKIHNQKFQELTGNDIFKGDAPPGSAEKPLSVAKLREISGSDIFADGKAANRDYLGGV 934
           TAKKIHNQKF ELTGNDIFKGD PP SAEK LS+AKLRE+SG+DIFADGKA +RDYLGGV
Sbjct: 223 TAKKIHNQKFVELTGNDIFKGDVPPSSAEKSLSMAKLREMSGNDIFADGKAESRDYLGGV 282

Query: 935 RKPPGGESSIALV 973
           RKPPGGESSIALV
Sbjct: 283 RKPPGGESSIALV 295


>ref|XP_002310565.1| predicted protein [Populus trichocarpa] gi|118485862|gb|ABK94778.1|
           unknown [Populus trichocarpa]
           gi|222853468|gb|EEE91015.1| predicted protein [Populus
           trichocarpa]
          Length = 300

 Score =  365 bits (936), Expect = 2e-98
 Identities = 198/314 (63%), Positives = 234/314 (74%), Gaps = 3/314 (0%)
 Frame = +2

Query: 41  MERVTPVRKIHTNTADLLTWSENPXXXXXXXXXXXXXXXXXRCSTIRSHQPSDKISKVLF 220
           MER   V K HT+TADLLTW E P                   S+ R HQPSDKISKVLF
Sbjct: 1   MERNAAVSKPHTSTADLLTWKEAPPSASPSS-----------ASSHRPHQPSDKISKVLF 49

Query: 221 GGQLTEEEAESF-KRKPCSGHKMKEMTGSGIXXXXXXXXXXXXXXXXQGSNKTGLRVYQQ 397
           GGQ+++EEAES  K+KPCSG+K+KEMTGSGI                  +NKT +RVYQQ
Sbjct: 50  GGQVSQEEAESLMKKKPCSGYKLKEMTGSGIFNGQDGTSESGDANP---NNKTTVRVYQQ 106

Query: 398 ALNGISQISFSTEEKVSPKKPTSLPEVAKQRELSGTLESE-DAKMKKQLSDAKYKELSGQ 574
           A+ GISQISFS+EE +SPKKPTS+PEVAKQRELSGTL+++ D K  K +S+AK+KE+SG 
Sbjct: 107 AVTGISQISFSSEESISPKKPTSVPEVAKQRELSGTLQNDFDMKSNKLISNAKFKEISGH 166

Query: 575 DIFGXXXXXXXXXLAA-RNLELKGSIDMGEPAPRNVRTSVKVSNPSGGQSNIVFSEESPV 751
           DIF          LAA R++E K + D+GEPAPRN+RTSV+VSNP+GGQSNI+F EE  +
Sbjct: 167 DIFAPPSEIAPRSLAAARSMETKENKDIGEPAPRNIRTSVRVSNPAGGQSNILFGEEPVM 226

Query: 752 KTAKKIHNQKFQELTGNDIFKGDAPPGSAEKPLSVAKLREISGSDIFADGKAANRDYLGG 931
           KTA+KIHNQKF ELTGN IFKGD PPGSAEKPLS AKLRE+SGS IF+DGKA +RDYLGG
Sbjct: 227 KTARKIHNQKFNELTGNGIFKGDVPPGSAEKPLSTAKLREMSGSGIFSDGKAPSRDYLGG 286

Query: 932 VRKPPGGESSIALV 973
           VR+PPGG+SSIALV
Sbjct: 287 VRQPPGGQSSIALV 300


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