BLASTX nr result

ID: Coptis25_contig00005922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005922
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513429.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_004173073.1| PREDICTED: uncharacterized protein LOC101225...    69   4e-10
ref|XP_004147758.1| PREDICTED: uncharacterized protein LOC101217...    69   4e-10
ref|NP_178027.1| uncharacterized protein [Arabidopsis thaliana] ...    61   8e-08
ref|XP_002887766.1| hypothetical protein ARALYDRAFT_477076 [Arab...    60   2e-07

>ref|XP_002513429.1| conserved hypothetical protein [Ricinus communis]
           gi|223547337|gb|EEF48832.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 413

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 55/161 (34%), Positives = 72/161 (44%), Gaps = 27/161 (16%)
 Frame = +1

Query: 13  SKIIDEEIS--------PKAPKCTSSRWKEFLGLKK-------NKLEDLQXXXXXXXXXX 147
           S+I++ EIS        PKAP+C SSRWKE LGLKK       +K E+ +          
Sbjct: 116 SRIMEMEISGTDPYLFSPKAPRC-SSRWKELLGLKKLYQNANSSKAENHKTASLSSSNPN 174

Query: 148 XXXXXX--FLHRNXXXXXXXXXXXXXXXMNFPLLKDFDTEXXXXXXXXXXXXXXXXXHEH 321
                   FLHR+               ++ PLLKD D E                 H+H
Sbjct: 175 PNPKSLKHFLHRSSKSCSCNSSSTSDHSLSLPLLKDSDCESVSISSSRLSLSSSSSGHDH 234

Query: 322 EDLPRLSLDSEKLSLNLFP----------LHRNPPRVKLTK 414
           EDLPRLSLDSEK + N  P           ++NPPR+++ K
Sbjct: 235 EDLPRLSLDSEKPNPNTNPNPNPFVLNRNPNQNPPRMRMVK 275


>ref|XP_004173073.1| PREDICTED: uncharacterized protein LOC101225584 [Cucumis sativus]
          Length = 450

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 54/153 (35%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
 Frame = +1

Query: 37  SPKAPKCTSSRWKEFLGLKK----------NKLEDLQXXXXXXXXXXXXXXXX--FLHRN 180
           SPKAP+C SSRW+E LGLKK          N   D                    FLHR+
Sbjct: 147 SPKAPRC-SSRWRELLGLKKLYQSSSNGNGNAKNDNHKATTTSYFSEANSKALKYFLHRS 205

Query: 181 XXXXXXXXXXXXXXXMNFPLLKDFDTEXXXXXXXXXXXXXXXXXHEHEDLPRLSLDSEK- 357
                          ++ PLLKD D+E                 HEHEDL RLSLD E  
Sbjct: 206 SKSSLSSSLDSS---LSLPLLKDSDSESVSLSSSRVSLSSSSSGHEHEDLHRLSLDCENK 262

Query: 358 -----LSLNLFPLHRNPPRVKLTKQPKPKAAAS 441
                +SL+  P H NPPR++L K P+PK+ ++
Sbjct: 263 PNTNPISLHRNPNHNNPPRMRLVK-PRPKSESN 294


>ref|XP_004147758.1| PREDICTED: uncharacterized protein LOC101217146 [Cucumis sativus]
          Length = 450

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 54/153 (35%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
 Frame = +1

Query: 37  SPKAPKCTSSRWKEFLGLKK----------NKLEDLQXXXXXXXXXXXXXXXX--FLHRN 180
           SPKAP+C SSRW+E LGLKK          N   D                    FLHR+
Sbjct: 147 SPKAPRC-SSRWRELLGLKKLYQSSSNGNGNAKNDNHKATTTSYFSEANSKALKYFLHRS 205

Query: 181 XXXXXXXXXXXXXXXMNFPLLKDFDTEXXXXXXXXXXXXXXXXXHEHEDLPRLSLDSEK- 357
                          ++ PLLKD D+E                 HEHEDL RLSLD E  
Sbjct: 206 SKSSLSSSLDSS---LSLPLLKDSDSESVSLSSSRVSLSSSSSGHEHEDLHRLSLDCENK 262

Query: 358 -----LSLNLFPLHRNPPRVKLTKQPKPKAAAS 441
                +SL+  P H NPPR++L K P+PK+ ++
Sbjct: 263 PNTNPISLHRNPNHNNPPRMRLVK-PRPKSESN 294


>ref|NP_178027.1| uncharacterized protein [Arabidopsis thaliana]
           gi|3152569|gb|AAC17050.1| Contains similarity to YELA
           protein gb|U63062 from Dictyostelium discoideum
           [Arabidopsis thaliana] gi|48525341|gb|AAT44972.1|
           At1g79060 [Arabidopsis thaliana]
           gi|50198942|gb|AAT70474.1| At1g79060 [Arabidopsis
           thaliana] gi|110737422|dbj|BAF00655.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332198078|gb|AEE36199.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 396

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 48/145 (33%), Positives = 63/145 (43%), Gaps = 21/145 (14%)
 Frame = +1

Query: 37  SPKAPKCTSSRWKEFLGLKK-----NKLEDLQXXXXXXXXXXXXXXXXFLHRNXXXXXXX 201
           SPKAP+C SSRW++ LGLK+     +K                     FLHR+       
Sbjct: 114 SPKAPRC-SSRWRDLLGLKRFSQNSSKSASTATTTTTNPRSSTSSLKQFLHRSSRSSSSS 172

Query: 202 XXXXXXXXMNFPLLKDFDTEXXXXXXXXXXXXXXXXXHEHEDLPRLSLDSEK-------- 357
                   M+ PLLKD D+E                 H+HEDLPRLSLD+E+        
Sbjct: 173 SDASLL--MSLPLLKDSDSESVSISSSRMSLSSSSSGHDHEDLPRLSLDAERPNQNHIIN 230

Query: 358 ----LSLNLF----PLHRNPPRVKL 408
               L+ N F     L+ NPPR++L
Sbjct: 231 LNHNLTANPFAPARSLNPNPPRMRL 255


>ref|XP_002887766.1| hypothetical protein ARALYDRAFT_477076 [Arabidopsis lyrata subsp.
           lyrata] gi|297333607|gb|EFH64025.1| hypothetical protein
           ARALYDRAFT_477076 [Arabidopsis lyrata subsp. lyrata]
          Length = 382

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 46/140 (32%), Positives = 61/140 (43%), Gaps = 16/140 (11%)
 Frame = +1

Query: 37  SPKAPKCTSSRWKEFLGLKK--NKLEDLQXXXXXXXXXXXXXXXXFLHRNXXXXXXXXXX 210
           SPKAP+C SSRW++ LGLK+     +                   FLHR+          
Sbjct: 113 SPKAPRC-SSRWRDLLGLKRFSQNSKAASTTIPSNPRSSTSSLKQFLHRSSRSSSSSSDA 171

Query: 211 XXXXXMNFPLLKDFDTEXXXXXXXXXXXXXXXXXHEHEDLPRLSLDSEK----------L 360
                M+ PLLKD D E                 H+HED+PRLSLD+E+          L
Sbjct: 172 SLL--MSLPLLKDSDCESISISSSRMSLSSSSSGHDHEDIPRLSLDAERPNHNHNLNHNL 229

Query: 361 SLNLF----PLHRNPPRVKL 408
           + N F     L+ NPPR++L
Sbjct: 230 TANPFAPARSLNPNPPRMRL 249


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