BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005916
         (1267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31488.3| unnamed protein product [Vitis vinifera]              498   e-138
ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [...   495   e-137
ref|XP_002312025.1| predicted protein [Populus trichocarpa] gi|2...   484   e-134
ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [...   467   e-129
ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [...   466   e-129

>emb|CBI31488.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  498 bits (1281), Expect = e-138
 Identities = 243/351 (69%), Positives = 288/351 (82%)
 Frame = +1

Query: 214  ETFGEAWPDFNEGLTYTDILKHPSSNSDWSLINFYSTKYSNSAPPHGWQQRIRNGQITFD 393
            +TFG  WPDFN+GLTY D++   +S+S+ +LI++YS+K+ NSAP  GW QRI  GQIT D
Sbjct: 3    KTFGVPWPDFNDGLTYNDVVS--ASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVD 60

Query: 394  GEVVTDPDTCLRAGSVLVYHRLPWKEPDAPYLLQVLFEDDDLVALNKPSGLQVLPGGSFQ 573
            G VVT+P T LRAGS LVYHRLPW+EPDAPYLL++L+EDDD++ALNKPSGLQVLPGG FQ
Sbjct: 61   GTVVTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQ 120

Query: 574  QRTVLTQLQWRVKKQRSQRLAGNGALCGRDSNPVPVHRLGRGTSGILLCAKTKLAKVRLA 753
            QRTVLTQLQWR  KQ S           ++S+ VPVHRLGRGTSGILLCAKTKLAK RLA
Sbjct: 121  QRTVLTQLQWRANKQNSLPAC-------QESHSVPVHRLGRGTSGILLCAKTKLAKTRLA 173

Query: 754  AYFAYGTSVVGDKRITNLELNTTRKISKIYRALVTEIIEENQVVISQPIGVIQYPGVANG 933
            AYFA GTSVVG  R  +++  T RKISKIYRALV  I++++++VI QPIG++QYPGVA G
Sbjct: 174  AYFADGTSVVGGNRDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKG 233

Query: 934  LYVALSSGKPALSKVKVLERNVEENHSLVQVEIQTGRPHQIRIHLSFLGHPLLGDPLYVT 1113
            LYVA  SGKPALSKV +LER+V+ +H +VQVEIQ+GRPHQIRIHLSF+GHPLLGDPLYV 
Sbjct: 234  LYVASPSGKPALSKVSILERDVQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVP 293

Query: 1114 GGHPNCFDFESSISSCAHDGGYQRPMKPVPGDCGYYLHAYRLVLDHPTTNE 1266
            GG P C D E +  S A DGGYQRP+KPVPGDCGY+LHA++LVL HPTTNE
Sbjct: 294  GGQPKCCDAEFTNESYALDGGYQRPVKPVPGDCGYHLHAHQLVLSHPTTNE 344


>ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [Vitis vinifera]
          Length = 348

 Score =  495 bits (1274), Expect = e-137
 Identities = 243/352 (69%), Positives = 289/352 (82%), Gaps = 1/352 (0%)
 Frame = +1

Query: 214  ETFGEAWPDFNEGLTYTDILKHPSSNSDWSLINFYSTKYSNSAPPHGWQQRIRNGQITFD 393
            +TFG  WPDFN+GLTY D++   +S+S+ +LI++YS+K+ NSAP  GW QRI  GQIT D
Sbjct: 3    KTFGVPWPDFNDGLTYNDVVS--ASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVD 60

Query: 394  GEVVTDPDTCLRAGSVLVYHRLPWKEPDAPYLLQVLFEDDDLVALNKPSGLQVLPGGSFQ 573
            G VVT+P T LRAGS LVYHRLPW+EPDAPYLL++L+EDDD++ALNKPSGLQVLPGG FQ
Sbjct: 61   GTVVTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQ 120

Query: 574  QRTVLTQLQWRVKKQRSQRLAGNGALCGRDSNPVPVHRLGRGTSGILLCAKTKLAKVRLA 753
            QRTVLTQLQWR  KQ S           ++S+ VPVHRLGRGTSGILLCAKTKLAK RLA
Sbjct: 121  QRTVLTQLQWRANKQNSLPAC-------QESHSVPVHRLGRGTSGILLCAKTKLAKTRLA 173

Query: 754  AYFAYGTSVVGDKRI-TNLELNTTRKISKIYRALVTEIIEENQVVISQPIGVIQYPGVAN 930
            AYFA GTSVVG  R+  +++  T RKISKIYRALV  I++++++VI QPIG++QYPGVA 
Sbjct: 174  AYFADGTSVVGGNRLDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAK 233

Query: 931  GLYVALSSGKPALSKVKVLERNVEENHSLVQVEIQTGRPHQIRIHLSFLGHPLLGDPLYV 1110
            GLYVA  SGKPALSKV +LER+V+ +H +VQVEIQ+GRPHQIRIHLSF+GHPLLGDPLYV
Sbjct: 234  GLYVASPSGKPALSKVSILERDVQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYV 293

Query: 1111 TGGHPNCFDFESSISSCAHDGGYQRPMKPVPGDCGYYLHAYRLVLDHPTTNE 1266
             GG P C D E +  S A DGGYQRP+KPVPGDCGY+LHA++LVL HPTTNE
Sbjct: 294  PGGQPKCCDAEFTNESYALDGGYQRPVKPVPGDCGYHLHAHQLVLSHPTTNE 345


>ref|XP_002312025.1| predicted protein [Populus trichocarpa] gi|222851845|gb|EEE89392.1|
            predicted protein [Populus trichocarpa]
          Length = 377

 Score =  484 bits (1246), Expect = e-134
 Identities = 242/358 (67%), Positives = 281/358 (78%), Gaps = 1/358 (0%)
 Frame = +1

Query: 196  NPSRS-VETFGEAWPDFNEGLTYTDILKHPSSNSDWSLINFYSTKYSNSAPPHGWQQRIR 372
            N SRS + +FG  WPD NEGL Y D++   SS+S  +LI+FYS+KY NSAP  GW QRI 
Sbjct: 5    NNSRSPLCSFGSPWPDLNEGLFYNDVVS-TSSDSGLTLIHFYSSKYKNSAPLQGWLQRIH 63

Query: 373  NGQITFDGEVVTDPDTCLRAGSVLVYHRLPWKEPDAPYLLQVLFEDDDLVALNKPSGLQV 552
            NGQIT DGEVV +P   LR G  LVYHRLPW+EPDAPYLLQVL+EDDD+VALNKP GLQV
Sbjct: 64   NGQITIDGEVVKEPKAILRDGMELVYHRLPWREPDAPYLLQVLYEDDDMVALNKPPGLQV 123

Query: 553  LPGGSFQQRTVLTQLQWRVKKQRSQRLAGNGALCGRDSNPVPVHRLGRGTSGILLCAKTK 732
            LPGG FQQRTVL QLQWR  K       G+ +L  + S+PVPVHRLGRGTSGILLCAKTK
Sbjct: 124  LPGGLFQQRTVLMQLQWRASK-------GSSSLAIQGSHPVPVHRLGRGTSGILLCAKTK 176

Query: 733  LAKVRLAAYFAYGTSVVGDKRITNLELNTTRKISKIYRALVTEIIEENQVVISQPIGVIQ 912
            +AK  LAAYFA GTS++GD    N+E +  RKISKIYRALV  I+ +++++I QPIG ++
Sbjct: 177  VAKTSLAAYFADGTSLIGDSSNANMEQSKRRKISKIYRALVNGILNQDKIIIKQPIGTMR 236

Query: 913  YPGVANGLYVALSSGKPALSKVKVLERNVEENHSLVQVEIQTGRPHQIRIHLSFLGHPLL 1092
            YPGVA GLYVA  SGKPALSKV+VLER+ + N +LVQVEI++GRPHQIRIHLSF+GHPLL
Sbjct: 237  YPGVAKGLYVASPSGKPALSKVEVLERDSQLNQTLVQVEIESGRPHQIRIHLSFIGHPLL 296

Query: 1093 GDPLYVTGGHPNCFDFESSISSCAHDGGYQRPMKPVPGDCGYYLHAYRLVLDHPTTNE 1266
            GDPLY  GG P CFD E    S A DGGY+RP KPVPGDCGYYLHA++LVL HPT NE
Sbjct: 297  GDPLYDVGGQPMCFDSEHEDESFAEDGGYERPAKPVPGDCGYYLHAHQLVLSHPTKNE 354


>ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  467 bits (1202), Expect = e-129
 Identities = 233/354 (65%), Positives = 269/354 (75%)
 Frame = +1

Query: 205  RSVETFGEAWPDFNEGLTYTDILKHPSSNSDWSLINFYSTKYSNSAPPHGWQQRIRNGQI 384
            RS +  G  WPD N+GL Y D++K P S    SLI+FYS KY +SAP  GW QRI+N QI
Sbjct: 5    RSFQVIGIPWPDLNDGLFYNDVVKPPDSGK--SLIHFYSWKYKSSAPLEGWLQRIKNEQI 62

Query: 385  TFDGEVVTDPDTCLRAGSVLVYHRLPWKEPDAPYLLQVLFEDDDLVALNKPSGLQVLPGG 564
            T DGEV+TDP+T LR GS LVY RLPWKEPD PYLL++L+ED++++ALNKPSGLQVLPGG
Sbjct: 63   TIDGEVITDPETILRIGSDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPSGLQVLPGG 122

Query: 565  SFQQRTVLTQLQWRVKKQRSQRLAGNGALCGRDSNPVPVHRLGRGTSGILLCAKTKLAKV 744
             FQQRTVLTQLQW   KQ              + +PVPVHRLGRGTSGILLCAKTKLA+ 
Sbjct: 123  VFQQRTVLTQLQWWSSKQSFS--------VSEELHPVPVHRLGRGTSGILLCAKTKLART 174

Query: 745  RLAAYFAYGTSVVGDKRITNLELNTTRKISKIYRALVTEIIEENQVVISQPIGVIQYPGV 924
            + AAYFA GTS V   R + +E  T RKISKIYRALVT II +++V + QPIG +QYPGV
Sbjct: 175  QFAAYFAEGTSSVRRNRNSTMEEGTKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGV 234

Query: 925  ANGLYVALSSGKPALSKVKVLERNVEENHSLVQVEIQTGRPHQIRIHLSFLGHPLLGDPL 1104
            A GLYVA  SGKPA SKV VLER+ +  H+LVQVEIQ+GRPHQIRIHLS +GHPLLGDPL
Sbjct: 235  AQGLYVATPSGKPACSKVNVLERDEQSKHTLVQVEIQSGRPHQIRIHLSSIGHPLLGDPL 294

Query: 1105 YVTGGHPNCFDFESSISSCAHDGGYQRPMKPVPGDCGYYLHAYRLVLDHPTTNE 1266
            YV GG PNC   E    S A DGGY+RP KPVPGDCGYYLHA++L+L HP TNE
Sbjct: 295  YVAGGQPNCLHSEVVNQSFAEDGGYERPTKPVPGDCGYYLHAHQLILYHPKTNE 348


>ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  466 bits (1199), Expect = e-129
 Identities = 232/354 (65%), Positives = 269/354 (75%)
 Frame = +1

Query: 205  RSVETFGEAWPDFNEGLTYTDILKHPSSNSDWSLINFYSTKYSNSAPPHGWQQRIRNGQI 384
            RS +  G  WPD N+GL Y D++K P S    SLI+FYS KY +SAP  GW QRI+N QI
Sbjct: 5    RSFQVIGIPWPDLNDGLFYNDVVKPPDSGK--SLIHFYSWKYKSSAPLEGWLQRIKNEQI 62

Query: 385  TFDGEVVTDPDTCLRAGSVLVYHRLPWKEPDAPYLLQVLFEDDDLVALNKPSGLQVLPGG 564
            T DGEV+TDP+T LR GS LVY RLPWKEPD PYLL++L+ED++++ALNKPSGLQVLPGG
Sbjct: 63   TIDGEVITDPETILRIGSDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPSGLQVLPGG 122

Query: 565  SFQQRTVLTQLQWRVKKQRSQRLAGNGALCGRDSNPVPVHRLGRGTSGILLCAKTKLAKV 744
             FQQRTVLTQLQW   KQ              + +PVPVHRLGRGTSGILLCAKTKLA+ 
Sbjct: 123  VFQQRTVLTQLQWWSSKQSFS--------VSEELHPVPVHRLGRGTSGILLCAKTKLART 174

Query: 745  RLAAYFAYGTSVVGDKRITNLELNTTRKISKIYRALVTEIIEENQVVISQPIGVIQYPGV 924
            + AAYFA GTS V   R + +E  T RKISKIYRALVT II +++V + QPIG +QYPGV
Sbjct: 175  QFAAYFAEGTSSVRRNRNSTMEEGTKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGV 234

Query: 925  ANGLYVALSSGKPALSKVKVLERNVEENHSLVQVEIQTGRPHQIRIHLSFLGHPLLGDPL 1104
            A GLYVA  SGKPA SKV VLER+ +  H+LVQVEIQ+GRPHQIRIHLS +GHPL+GDPL
Sbjct: 235  AQGLYVATPSGKPACSKVNVLERDEQSKHTLVQVEIQSGRPHQIRIHLSSIGHPLVGDPL 294

Query: 1105 YVTGGHPNCFDFESSISSCAHDGGYQRPMKPVPGDCGYYLHAYRLVLDHPTTNE 1266
            YV GG PNC   E    S A DGGY+RP KPVPGDCGYYLHA++L+L HP TNE
Sbjct: 295  YVAGGQPNCLHSEVVNQSFAEDGGYERPTKPVPGDCGYYLHAHQLILYHPKTNE 348