BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005906
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO37645.1| NBS-LRR resistance protein RGH1 [Manihot esculenta]     67   2e-09
gb|AAO37646.1| NBS-LRR resistance protein RGH2 [Manihot esculenta]     65   6e-09
ref|XP_002302911.1| cc-nbs-lrr resistance protein [Populus trich...    56   3e-06
ref|XP_002302905.1| nbs-lrr resistance protein [Populus trichoca...    56   3e-06
ref|XP_002334156.1| cc-nbs-lrr resistance protein [Populus trich...    56   4e-06

>gb|AAO37645.1| NBS-LRR resistance protein RGH1 [Manihot esculenta]
          Length = 1035

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
 Frame = -1

Query: 247  PKGFNKLKGIQRLDLYHCDTLDFELKELNHLTMLQHLDIDDCPILKERFG--EGRDWSIL 74
            P G   L  +QRL +  C  +    +E+  LT L+ LDIDDCP LKER G  +G DW+ +
Sbjct: 919  PDGLRNLTCLQRLTIEICPAIKCLPQEMRSLTSLRELDIDDCPQLKERCGNRKGADWAFI 978

Query: 73   SHVPKITIDDKEITK 29
            SH+P I +D++ I +
Sbjct: 979  SHIPNIEVDNQRIQR 993


>gb|AAO37646.1| NBS-LRR resistance protein RGH2 [Manihot esculenta]
          Length = 1024

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
 Frame = -1

Query: 247  PKGFNKLKGIQRLDLYHCDTLDFELKELNHLTMLQHLDIDDCPILKERFG--EGRDWSIL 74
            P G   L  +QRL +  C  +    +E+  LT L+ L+I+DCP LKER G  +G DW+ +
Sbjct: 918  PDGLRNLTCLQRLTIQICPAIKCLPQEMRSLTSLRELNINDCPQLKERCGNRKGADWAFI 977

Query: 73   SHVPKITIDDKEITK 29
            SH+P I +DD+ I +
Sbjct: 978  SHIPNIEVDDQRIQR 992


>ref|XP_002302911.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844637|gb|EEE82184.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1053

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
 Frame = -1

Query: 286  KTVYIWFSPHSSLPKGFNKLKGIQRLDLYHCDTLDFELKELNHLTMLQHLDIDDCPILKE 107
            K V +     +SL +G   L+ ++ LDL +C  L+   + + HLT LQ L I DCP L++
Sbjct: 972  KLVIVDCDKFTSLSEGVRHLRVLEDLDLVNCPELNSLPESIQHLTSLQSLTIWDCPNLEK 1031

Query: 106  RFGE--GRDWSILSHVPKITI 50
            R  +  G DW  ++H+PKI I
Sbjct: 1032 RCEKDLGEDWPKIAHIPKIII 1052


>ref|XP_002302905.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844631|gb|EEE82178.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 968

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
 Frame = -1

Query: 286  KTVYIWFSPHSSLPKGFNKLKGIQRLDLYHCDTLDFELKELNHLTMLQHLDIDDCPILKE 107
            K V +     +SL +G   L+ ++ LDL +C  L+   + + HLT LQ L I DCP L++
Sbjct: 887  KLVIVDCDKFTSLSEGVRHLRVLEDLDLVNCPELNSLPESIQHLTSLQSLTIWDCPNLEK 946

Query: 106  RFGE--GRDWSILSHVPKITI 50
            R  +  G DW  ++H+PKI I
Sbjct: 947  RCEKDLGEDWPKIAHIPKIII 967


>ref|XP_002334156.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869855|gb|EEF06986.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 826

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
 Frame = -1

Query: 256 SSLPKGFNKLKGIQRLDLYHCDTLDFELKELNHLTMLQHLDIDDCPILKERFGE--GRDW 83
           +SL +G   L  ++ L+LY C  L+   + + HLT LQ L I  CP LK+R  +  G DW
Sbjct: 750 TSLSEGVRHLTALEDLELYGCPELNSLPESIQHLTSLQSLIIRGCPNLKKRCEKDLGEDW 809

Query: 82  SILSHVPKITIDDKEI 35
             ++H+P I+ID   I
Sbjct: 810 PKIAHIPHISIDFNRI 825