BLASTX nr result

ID: Coptis25_contig00005904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005904
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN26165.1| unknown [Zea mays] gi|414865876|tpg|DAA44433.1| T...   156   2e-46
tpg|DAA44432.1| TPA: hypothetical protein ZEAMMB73_624785 [Zea m...   156   2e-46
ref|NP_849913.2| Topless-related protein 1 [Arabidopsis thaliana...   155   4e-46
ref|NP_178164.3| Topless-related protein 1 [Arabidopsis thaliana...   155   4e-46
dbj|BAE98958.1| hypothetical protein [Arabidopsis thaliana]           155   4e-46

>gb|ACN26165.1| unknown [Zea mays] gi|414865876|tpg|DAA44433.1| TPA: hypothetical
           protein ZEAMMB73_624785 [Zea mays]
           gi|414865877|tpg|DAA44434.1| TPA: hypothetical protein
           ZEAMMB73_624785 [Zea mays]
          Length = 1128

 Score =  156 bits (394), Expect(2) = 2e-46
 Identities = 75/80 (93%), Positives = 77/80 (96%)
 Frame = -3

Query: 242 RENEQLSKFGDTKYARSIMLAELKKLIEANPLFRDKLQFPTLKTSRLRTLINQSLNWQHQ 63
           RENEQLSK+GDTK AR IMLAELKKLIEANPLFRDKLQFP+LKTSRLRTLINQSLNWQHQ
Sbjct: 125 RENEQLSKYGDTKSARQIMLAELKKLIEANPLFRDKLQFPSLKTSRLRTLINQSLNWQHQ 184

Query: 62  LCKNPRSNPDIKTLFVDHSC 3
           LCKNPR NPDIKTLFVDHSC
Sbjct: 185 LCKNPRPNPDIKTLFVDHSC 204



 Score = 55.5 bits (132), Expect(2) = 2e-46
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 10/53 (18%)
 Frame = -1

Query: 445 VIFQVRQHLY----------NRVEILVKDLKVFSFSNDELFKEITQLLTLENF 317
           + F++R+  Y            VEILVKDLKVF+  N+ELFKEITQLLTLENF
Sbjct: 72  IFFEIRKQKYLEALDKHDRSKAVEILVKDLKVFASFNEELFKEITQLLTLENF 124


>tpg|DAA44432.1| TPA: hypothetical protein ZEAMMB73_624785 [Zea mays]
          Length = 1114

 Score =  156 bits (394), Expect(2) = 2e-46
 Identities = 75/80 (93%), Positives = 77/80 (96%)
 Frame = -3

Query: 242 RENEQLSKFGDTKYARSIMLAELKKLIEANPLFRDKLQFPTLKTSRLRTLINQSLNWQHQ 63
           RENEQLSK+GDTK AR IMLAELKKLIEANPLFRDKLQFP+LKTSRLRTLINQSLNWQHQ
Sbjct: 125 RENEQLSKYGDTKSARQIMLAELKKLIEANPLFRDKLQFPSLKTSRLRTLINQSLNWQHQ 184

Query: 62  LCKNPRSNPDIKTLFVDHSC 3
           LCKNPR NPDIKTLFVDHSC
Sbjct: 185 LCKNPRPNPDIKTLFVDHSC 204



 Score = 55.5 bits (132), Expect(2) = 2e-46
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 10/53 (18%)
 Frame = -1

Query: 445 VIFQVRQHLY----------NRVEILVKDLKVFSFSNDELFKEITQLLTLENF 317
           + F++R+  Y            VEILVKDLKVF+  N+ELFKEITQLLTLENF
Sbjct: 72  IFFEIRKQKYLEALDKHDRSKAVEILVKDLKVFASFNEELFKEITQLLTLENF 124


>ref|NP_849913.2| Topless-related protein 1 [Arabidopsis thaliana]
           gi|302393805|sp|Q0WV90.3|TPR1_ARATH RecName:
           Full=Topless-related protein 1; AltName: Full=Protein
           MODIFIER OF SNC1 10 gi|332198291|gb|AEE36412.1|
           Topless-related protein 1 [Arabidopsis thaliana]
          Length = 1120

 Score =  155 bits (392), Expect(2) = 4e-46
 Identities = 74/80 (92%), Positives = 77/80 (96%)
 Frame = -3

Query: 242 RENEQLSKFGDTKYARSIMLAELKKLIEANPLFRDKLQFPTLKTSRLRTLINQSLNWQHQ 63
           RENEQLSK+GDTK AR+IML ELKKLIEANPLFRDKLQFPTL+TSRLRTLINQSLNWQHQ
Sbjct: 125 RENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTSRLRTLINQSLNWQHQ 184

Query: 62  LCKNPRSNPDIKTLFVDHSC 3
           LCKNPR NPDIKTLFVDHSC
Sbjct: 185 LCKNPRPNPDIKTLFVDHSC 204



 Score = 55.5 bits (132), Expect(2) = 4e-46
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 10/53 (18%)
 Frame = -1

Query: 445 VIFQVRQHLY----------NRVEILVKDLKVFSFSNDELFKEITQLLTLENF 317
           + F++R+  Y            V+ILVKDLKVFS  N+ELFKEITQLLTLENF
Sbjct: 72  IFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENF 124


>ref|NP_178164.3| Topless-related protein 1 [Arabidopsis thaliana]
           gi|332198290|gb|AEE36411.1| Topless-related protein 1
           [Arabidopsis thaliana]
          Length = 1119

 Score =  155 bits (392), Expect(2) = 4e-46
 Identities = 74/80 (92%), Positives = 77/80 (96%)
 Frame = -3

Query: 242 RENEQLSKFGDTKYARSIMLAELKKLIEANPLFRDKLQFPTLKTSRLRTLINQSLNWQHQ 63
           RENEQLSK+GDTK AR+IML ELKKLIEANPLFRDKLQFPTL+TSRLRTLINQSLNWQHQ
Sbjct: 125 RENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTSRLRTLINQSLNWQHQ 184

Query: 62  LCKNPRSNPDIKTLFVDHSC 3
           LCKNPR NPDIKTLFVDHSC
Sbjct: 185 LCKNPRPNPDIKTLFVDHSC 204



 Score = 55.5 bits (132), Expect(2) = 4e-46
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 10/53 (18%)
 Frame = -1

Query: 445 VIFQVRQHLY----------NRVEILVKDLKVFSFSNDELFKEITQLLTLENF 317
           + F++R+  Y            V+ILVKDLKVFS  N+ELFKEITQLLTLENF
Sbjct: 72  IFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENF 124


>dbj|BAE98958.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1119

 Score =  155 bits (392), Expect(2) = 4e-46
 Identities = 74/80 (92%), Positives = 77/80 (96%)
 Frame = -3

Query: 242 RENEQLSKFGDTKYARSIMLAELKKLIEANPLFRDKLQFPTLKTSRLRTLINQSLNWQHQ 63
           RENEQLSK+GDTK AR+IML ELKKLIEANPLFRDKLQFPTL+TSRLRTLINQSLNWQHQ
Sbjct: 125 RENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTSRLRTLINQSLNWQHQ 184

Query: 62  LCKNPRSNPDIKTLFVDHSC 3
           LCKNPR NPDIKTLFVDHSC
Sbjct: 185 LCKNPRPNPDIKTLFVDHSC 204



 Score = 55.5 bits (132), Expect(2) = 4e-46
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 10/53 (18%)
 Frame = -1

Query: 445 VIFQVRQHLY----------NRVEILVKDLKVFSFSNDELFKEITQLLTLENF 317
           + F++R+  Y            V+ILVKDLKVFS  N+ELFKEITQLLTLENF
Sbjct: 72  IFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENF 124


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