BLASTX nr result
ID: Coptis25_contig00005886
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00005886
(1177 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002454764.1| hypothetical protein SORBIDRAFT_04g036910 [S... 229 e-114
gb|ADX60168.1| LUG transcription factor [Zea mays] gi|413939440|... 227 e-114
ref|NP_001151541.1| LOC100285175 [Zea mays] gi|195647552|gb|ACG4... 227 e-114
ref|XP_003570372.1| PREDICTED: transcriptional corepressor LEUNI... 221 e-109
ref|XP_002266172.1| PREDICTED: transcriptional corepressor LEUNI... 224 e-108
>ref|XP_002454764.1| hypothetical protein SORBIDRAFT_04g036910 [Sorghum bicolor]
gi|241934595|gb|EES07740.1| hypothetical protein
SORBIDRAFT_04g036910 [Sorghum bicolor]
Length = 803
Score = 229 bits (585), Expect(4) = e-114
Identities = 129/213 (60%), Positives = 148/213 (69%), Gaps = 2/213 (0%)
Frame = +1
Query: 535 SMESEASPQLMDASRMALLKSATNHPGQLVQGNPGSVSTALQQIQARTQLATDIKTEVNM 714
SMESE S QL++ASRMALLKSATNH GQLV G PG+VST LQQIQAR Q DIK+E NM
Sbjct: 153 SMESEGS-QLIEASRMALLKSATNHAGQLVPGTPGNVSTTLQQIQARNQQTIDIKSEGNM 211
Query: 715 SVTQRSLPM-ASTIYGQ-VMQSKSGMVSAGLNQGVGGLPLKGWPLTGIDQIRPTLSAQVQ 888
V QRSLPM S++YGQ ++Q K G+ AGLNQGV GLPLKGWPLTGIDQ+RP L AQ+Q
Sbjct: 212 GVPQRSLPMDPSSLYGQGIIQPKPGLSGAGLNQGVSGLPLKGWPLTGIDQLRPNLGAQMQ 271
Query: 889 KPYLQNPIQSQLLTPXXXXXXXXXXXXXGNLGTSPNYADMDPXXXXXXXXXNINTKDGQS 1068
KP+L Q QL++P GNLG S NY D+DP +N KDGQ
Sbjct: 272 KPFLSTQSQFQLMSPQQQQQYLAQAQAQGNLGNSTNYGDIDPRRLTALTRGGLNGKDGQP 331
Query: 1069 TGIEGFIGSPMQSSSPKVRELPQDQAEYMMKMK 1167
G +G I SPMQSSSPKVR DQ EY+MKM+
Sbjct: 332 AGTDGCISSPMQSSSPKVR---PDQ-EYLMKMQ 360
Score = 181 bits (459), Expect(4) = e-114
Identities = 87/114 (76%), Positives = 98/114 (85%), Gaps = 1/114 (0%)
Frame = +3
Query: 114 LYVYIYDYLLKINLHNSAKAFMTQGKVAVDPVAIDAPGGFLFEWWSVFWDIFIARMNEKH 293
L VYIYDYLLK NL +AKAFM +GKVA DPVAIDAPGGFLFEWWSVFWDIFIAR NEKH
Sbjct: 12 LDVYIYDYLLKRNLQTTAKAFMAEGKVAADPVAIDAPGGFLFEWWSVFWDIFIARTNEKH 71
Query: 294 SENAAAYIETQQIKSREHHQQLQMPRMQIMQQRHA-LQRRDGNHPSIGGPGNAI 452
SE AAAY+E QQIK+REH QQ+QM ++Q+MQQRHA LQR + NHPS+ GP NA+
Sbjct: 72 SEVAAAYLEAQQIKAREHQQQMQMQQLQLMQQRHAQLQRTNANHPSLNGPINAL 125
Score = 42.7 bits (99), Expect(4) = e-114
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +2
Query: 452 NAEGMIGGSTASVLAAKMYGEHMKHLHS 535
N++G++G STASVLAAKMY E +KH HS
Sbjct: 126 NSDGILGPSTASVLAAKMYEERLKHPHS 153
Score = 28.9 bits (63), Expect(4) = e-114
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 4 MAQSNWEADKMYVQFCY 54
MAQSNWEADKM + Y
Sbjct: 1 MAQSNWEADKMLDVYIY 17
>gb|ADX60168.1| LUG transcription factor [Zea mays] gi|413939440|gb|AFW73991.1|
transcriptional corepressor LEUNIG [Zea mays]
Length = 799
Score = 227 bits (578), Expect(4) = e-114
Identities = 128/213 (60%), Positives = 148/213 (69%), Gaps = 2/213 (0%)
Frame = +1
Query: 535 SMESEASPQLMDASRMALLKSATNHPGQLVQGNPGSVSTALQQIQARTQLATDIKTEVNM 714
SMESE S QL++ASRMALLKSATNH GQLV G PG+VST LQQIQAR Q DIK+E NM
Sbjct: 153 SMESEGS-QLIEASRMALLKSATNHAGQLVPGTPGNVSTTLQQIQARNQQTIDIKSEGNM 211
Query: 715 SVTQRSLPM-ASTIYGQ-VMQSKSGMVSAGLNQGVGGLPLKGWPLTGIDQIRPTLSAQVQ 888
V QRSLPM S++YGQ ++Q K G+ AGLNQGV GLPLKGWPLTGIDQ+RP L AQ+Q
Sbjct: 212 GVPQRSLPMDPSSLYGQGLIQPKPGLSGAGLNQGVSGLPLKGWPLTGIDQLRPNLGAQMQ 271
Query: 889 KPYLQNPIQSQLLTPXXXXXXXXXXXXXGNLGTSPNYADMDPXXXXXXXXXNINTKDGQS 1068
KP+L Q QL++P GNLG S NY D+DP ++N KD Q
Sbjct: 272 KPFLSTQSQFQLMSPQQQQQYLAQAQAQGNLGNSTNYGDIDPRRLTALTRGSLNGKDSQP 331
Query: 1069 TGIEGFIGSPMQSSSPKVRELPQDQAEYMMKMK 1167
G +G I SPMQSSSPKVR DQ EY+MKM+
Sbjct: 332 AGTDGCISSPMQSSSPKVR---PDQ-EYLMKMQ 360
Score = 181 bits (460), Expect(4) = e-114
Identities = 89/121 (73%), Positives = 101/121 (83%), Gaps = 1/121 (0%)
Frame = +3
Query: 114 LYVYIYDYLLKINLHNSAKAFMTQGKVAVDPVAIDAPGGFLFEWWSVFWDIFIARMNEKH 293
L VYIYDYLLK NL +AKAFMT+GKVA DPVAIDAPGGFLFEWWSVFWDIFIAR NEKH
Sbjct: 12 LDVYIYDYLLKRNLQTTAKAFMTEGKVAADPVAIDAPGGFLFEWWSVFWDIFIARTNEKH 71
Query: 294 SENAAAYIETQQIKSREHHQQLQMPRMQIMQQRHA-LQRRDGNHPSIGGPGNAIMLKE*L 470
SE AAAY+E QQIK+REH QQ+QM ++Q+M QRHA LQR + NHPS+ GP NA+ + L
Sbjct: 72 SEVAAAYLEAQQIKAREHQQQMQMQQLQLMHQRHAQLQRTNANHPSLNGPINALNSEGIL 131
Query: 471 G 473
G
Sbjct: 132 G 132
Score = 43.9 bits (102), Expect(4) = e-114
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +2
Query: 452 NAEGMIGGSTASVLAAKMYGEHMKHLHS 535
N+EG++G STASVLAAKMY E +KH HS
Sbjct: 126 NSEGILGPSTASVLAAKMYEERLKHPHS 153
Score = 28.9 bits (63), Expect(4) = e-114
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 4 MAQSNWEADKMYVQFCY 54
MAQSNWEADKM + Y
Sbjct: 1 MAQSNWEADKMLDVYIY 17
>ref|NP_001151541.1| LOC100285175 [Zea mays] gi|195647552|gb|ACG43244.1| transcriptional
corepressor LEUNIG [Zea mays]
Length = 799
Score = 227 bits (578), Expect(4) = e-114
Identities = 128/213 (60%), Positives = 148/213 (69%), Gaps = 2/213 (0%)
Frame = +1
Query: 535 SMESEASPQLMDASRMALLKSATNHPGQLVQGNPGSVSTALQQIQARTQLATDIKTEVNM 714
SMESE S QL++ASRMALLKSATNH GQLV G PG+VST LQQIQAR Q DIK+E NM
Sbjct: 153 SMESEGS-QLIEASRMALLKSATNHAGQLVPGTPGNVSTTLQQIQARNQQTIDIKSEGNM 211
Query: 715 SVTQRSLPM-ASTIYGQ-VMQSKSGMVSAGLNQGVGGLPLKGWPLTGIDQIRPTLSAQVQ 888
V QRSLPM S++YGQ ++Q K G+ AGLNQGV GLPLKGWPLTGIDQ+RP L AQ+Q
Sbjct: 212 GVPQRSLPMDPSSLYGQGLIQPKPGLSGAGLNQGVSGLPLKGWPLTGIDQLRPNLGAQMQ 271
Query: 889 KPYLQNPIQSQLLTPXXXXXXXXXXXXXGNLGTSPNYADMDPXXXXXXXXXNINTKDGQS 1068
KP+L Q QL++P GNLG S NY D+DP ++N KD Q
Sbjct: 272 KPFLSTQSQFQLMSPQQQQQYLAQAQAQGNLGNSTNYGDIDPRRLTALTRGSLNGKDSQP 331
Query: 1069 TGIEGFIGSPMQSSSPKVRELPQDQAEYMMKMK 1167
G +G I SPMQSSSPKVR DQ EY+MKM+
Sbjct: 332 AGTDGCISSPMQSSSPKVR---PDQ-EYLMKMQ 360
Score = 181 bits (460), Expect(4) = e-114
Identities = 89/121 (73%), Positives = 101/121 (83%), Gaps = 1/121 (0%)
Frame = +3
Query: 114 LYVYIYDYLLKINLHNSAKAFMTQGKVAVDPVAIDAPGGFLFEWWSVFWDIFIARMNEKH 293
L VYIYDYLLK NL +AKAFMT+GKVA DPVAIDAPGGFLFEWWSVFWDIFIAR NEKH
Sbjct: 12 LDVYIYDYLLKRNLQTTAKAFMTEGKVAADPVAIDAPGGFLFEWWSVFWDIFIARTNEKH 71
Query: 294 SENAAAYIETQQIKSREHHQQLQMPRMQIMQQRHA-LQRRDGNHPSIGGPGNAIMLKE*L 470
SE AAAY+E QQIK+REH QQ+QM ++Q+M QRHA LQR + NHPS+ GP NA+ + L
Sbjct: 72 SEVAAAYLEAQQIKAREHQQQMQMQQLQLMHQRHAQLQRTNANHPSLNGPINALNSEGIL 131
Query: 471 G 473
G
Sbjct: 132 G 132
Score = 43.9 bits (102), Expect(4) = e-114
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +2
Query: 452 NAEGMIGGSTASVLAAKMYGEHMKHLHS 535
N+EG++G STASVLAAKMY E +KH HS
Sbjct: 126 NSEGILGPSTASVLAAKMYEERLKHPHS 153
Score = 28.9 bits (63), Expect(4) = e-114
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 4 MAQSNWEADKMYVQFCY 54
MAQSNWEADKM + Y
Sbjct: 1 MAQSNWEADKMLDVYIY 17
>ref|XP_003570372.1| PREDICTED: transcriptional corepressor LEUNIG-like [Brachypodium
distachyon]
Length = 800
Score = 221 bits (562), Expect(4) = e-109
Identities = 126/214 (58%), Positives = 147/214 (68%), Gaps = 3/214 (1%)
Frame = +1
Query: 535 SMESEASPQLMDASRMALLKSA-TNHPGQLVQGNPGSVSTALQQIQARTQLATDIKTEVN 711
SM+SE S QL+DASRMALLKSA TNH GQLV G PG+VST LQQIQAR Q DIK+E N
Sbjct: 153 SMDSEGS-QLIDASRMALLKSAATNHTGQLVPGTPGNVSTTLQQIQARNQQTIDIKSEGN 211
Query: 712 MSVTQRSLPM-ASTIYGQ-VMQSKSGMVSAGLNQGVGGLPLKGWPLTGIDQIRPTLSAQV 885
M V QRS+PM S++YGQ ++Q K G+ GL+QGV GLPLKGWPLTGIDQ+RP L AQ+
Sbjct: 212 MGVAQRSMPMDPSSLYGQGIIQQKPGLGGPGLSQGVSGLPLKGWPLTGIDQLRPNLGAQM 271
Query: 886 QKPYLQNPIQSQLLTPXXXXXXXXXXXXXGNLGTSPNYADMDPXXXXXXXXXNINTKDGQ 1065
QKP+L Q QL++P GNL S NY DMDP +N KDGQ
Sbjct: 272 QKPFLTTQSQFQLMSPQQQQQLLAQAQVQGNLSNSTNYGDMDPRRFTTLTRGGMNGKDGQ 331
Query: 1066 STGIEGFIGSPMQSSSPKVRELPQDQAEYMMKMK 1167
S G +G I SPMQS+SPKVR DQ EY+MKM+
Sbjct: 332 SAGTDGCISSPMQSNSPKVR---SDQ-EYLMKMQ 361
Score = 172 bits (436), Expect(4) = e-109
Identities = 82/114 (71%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
Frame = +3
Query: 114 LYVYIYDYLLKINLHNSAKAFMTQGKVAVDPVAIDAPGGFLFEWWSVFWDIFIARMNEKH 293
L VYIYDYLLK NL +AKAFM +GKVA DPVAIDAPGGFLFEWWSVFWDIFIAR NEKH
Sbjct: 12 LDVYIYDYLLKRNLQTTAKAFMAEGKVAADPVAIDAPGGFLFEWWSVFWDIFIARTNEKH 71
Query: 294 SENAAAYIETQQIKSREHHQQLQMPRMQIMQQRHA-LQRRDGNHPSIGGPGNAI 452
SE AAAY+E QQIK+REH QQ+QM ++Q++QQRHA +QR + H ++ GP NA+
Sbjct: 72 SEVAAAYLEAQQIKAREHQQQMQMQQLQLIQQRHAQMQRTNSGHAALNGPINAL 125
Score = 42.7 bits (99), Expect(4) = e-109
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +2
Query: 452 NAEGMIGGSTASVLAAKMYGEHMKHLHS 535
N++G++G STASVLAAKMY E +KH HS
Sbjct: 126 NSDGILGPSTASVLAAKMYEERLKHPHS 153
Score = 28.9 bits (63), Expect(4) = e-109
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 4 MAQSNWEADKMYVQFCY 54
MAQSNWEADKM + Y
Sbjct: 1 MAQSNWEADKMLDVYIY 17
>ref|XP_002266172.1| PREDICTED: transcriptional corepressor LEUNIG [Vitis vinifera]
gi|297744346|emb|CBI37316.3| unnamed protein product
[Vitis vinifera]
Length = 779
Score = 224 bits (570), Expect(4) = e-108
Identities = 119/198 (60%), Positives = 141/198 (71%), Gaps = 1/198 (0%)
Frame = +1
Query: 535 SMESEASPQLMDASRMALLKSATNHPGQLVQGNPGSVSTALQQIQARTQLATDIKTEVNM 714
SM+SE SP L+DA+RMALLKSATNH QLVQGN GS+S ALQQIQARTQL DIK EVN+
Sbjct: 155 SMDSETSPALIDANRMALLKSATNHQSQLVQGNSGSMSAALQQIQARTQLTPDIKGEVNL 214
Query: 715 SVTQRSLPMASTIYG-QVMQSKSGMVSAGLNQGVGGLPLKGWPLTGIDQIRPTLSAQVQK 891
TQ+SLPM +IYG ++QSKSG+ AGLNQGV GLPLKGWPLTGI+Q+RP+L QVQK
Sbjct: 215 GATQKSLPMDPSIYGPAILQSKSGLGGAGLNQGVTGLPLKGWPLTGIEQLRPSLGVQVQK 274
Query: 892 PYLQNPIQSQLLTPXXXXXXXXXXXXXGNLGTSPNYADMDPXXXXXXXXXNINTKDGQST 1071
P + P Q+Q + NLG SPNY DMDP ++NTKDGQS
Sbjct: 275 PNI--PTQNQFILASQQQQVLAHAQAQSNLGNSPNYGDMDPRRLCGIPRGSLNTKDGQSA 332
Query: 1072 GIEGFIGSPMQSSSPKVR 1125
+G I SP+QSSSPK++
Sbjct: 333 RNDGSICSPVQSSSPKMK 350
Score = 169 bits (428), Expect(4) = e-108
Identities = 87/116 (75%), Positives = 95/116 (81%), Gaps = 3/116 (2%)
Frame = +3
Query: 114 LYVYIYDYLLKINLHNSAKAFMTQGKVAVDPVAIDAPGGFLFEWWSVFWDIFIARMNEKH 293
L VYI+DYLLK LH SAKAFMT+GKVA DPVAIDAPGGFLFEWWSVFWDIFIAR N+KH
Sbjct: 12 LDVYIHDYLLKRKLHASAKAFMTEGKVATDPVAIDAPGGFLFEWWSVFWDIFIARTNDKH 71
Query: 294 SENAAAYIETQQIKSRE--HHQQLQMPRMQIMQQRHA-LQRRDGNHPSIGGPGNAI 452
SE AAAYIE QQ+K+RE QQLQM ++Q MQ R A LQRRD NHP +GG NAI
Sbjct: 72 SEAAAAYIEAQQMKAREQQQQQQLQMQQLQFMQHRTAQLQRRDPNHPPLGGSMNAI 127
Score = 42.7 bits (99), Expect(4) = e-108
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +2
Query: 452 NAEGMIGGSTASVLAAKMYGEHMKHLHS 535
N+EGM+G S+ASVLA KMY E MKH HS
Sbjct: 128 NSEGMMGQSSASVLAMKMYEERMKHPHS 155
Score = 27.7 bits (60), Expect(4) = e-108
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 4 MAQSNWEADKM 36
MAQSNWEADKM
Sbjct: 1 MAQSNWEADKM 11