BLASTX nr result

ID: Coptis25_contig00005884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005884
         (1099 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163267.1| PREDICTED: LOW QUALITY PROTEIN: palmitoyl-ac...   281   2e-73
ref|XP_004149858.1| PREDICTED: palmitoyl-acyl carrier protein th...   281   2e-73
emb|CBI28125.3| unnamed protein product [Vitis vinifera]              280   6e-73
ref|XP_002284850.1| PREDICTED: myristoyl-acyl carrier protein th...   280   6e-73
ref|XP_002515564.1| palmitoyl-acyl carrier protein thioesterase ...   278   2e-72

>ref|XP_004163267.1| PREDICTED: LOW QUALITY PROTEIN: palmitoyl-acyl carrier protein
           thioesterase, chloroplastic-like [Cucumis sativus]
          Length = 416

 Score =  281 bits (719), Expect = 2e-73
 Identities = 144/225 (64%), Positives = 167/225 (74%), Gaps = 6/225 (2%)
 Frame = +2

Query: 2   VVQVDTWVAPNGKNGMRRDWLIRDGISGETLARASSVWVLMNTSTRKLSKLPDEVRVEIE 181
           VVQVDTWV  +GKNGMRRDWL+RD  +GETL RASSVWV+MN  TRKLSK+P EVR EIE
Sbjct: 212 VVQVDTWVCASGKNGMRRDWLVRDCKTGETLTRASSVWVMMNKQTRKLSKIPGEVRGEIE 271

Query: 182 PYYMDCPPIVEEDSRKLPKLXXXXXXXXXXXXXXXXXXXXXXXDDDTADYVRTGLTPRWN 361
           PY+ + PPIVEED RKLPKL                       DDD+ADY+RTGLTPRW+
Sbjct: 272 PYFANSPPIVEEDGRKLPKL-----------------------DDDSADYIRTGLTPRWS 308

Query: 362 DLDLNQHVNNVKYIGWILESS-ISMLENHELAGIALEYRKECRKDNVLQSLTAVSKDGAN 538
           DLD+NQHVNNVKYIGWILES+ + +LE+HEL+ + LEYR+EC +D+VLQSLTAVS  G  
Sbjct: 309 DLDINQHVNNVKYIGWILESAPLPILESHELSTMTLEYRRECGRDSVLQSLTAVSGAGIT 368

Query: 539 DLP-----ECVHLLRLENGPEIVRGRTLWRPKRINNYGSVGQIPA 658
           +L      EC HLLRLENG EIVRGRT WRPK   N+G + QIPA
Sbjct: 369 NLADAGDIECQHLLRLENGAEIVRGRTEWRPKHATNFGMLDQIPA 413


>ref|XP_004149858.1| PREDICTED: palmitoyl-acyl carrier protein thioesterase,
           chloroplastic-like [Cucumis sativus]
          Length = 416

 Score =  281 bits (719), Expect = 2e-73
 Identities = 144/225 (64%), Positives = 167/225 (74%), Gaps = 6/225 (2%)
 Frame = +2

Query: 2   VVQVDTWVAPNGKNGMRRDWLIRDGISGETLARASSVWVLMNTSTRKLSKLPDEVRVEIE 181
           VVQVDTWV  +GKNGMRRDWL+RD  +GETL RASSVWV+MN  TRKLSK+P EVR EIE
Sbjct: 212 VVQVDTWVCASGKNGMRRDWLVRDCKTGETLTRASSVWVMMNKQTRKLSKIPGEVRGEIE 271

Query: 182 PYYMDCPPIVEEDSRKLPKLXXXXXXXXXXXXXXXXXXXXXXXDDDTADYVRTGLTPRWN 361
           PY+ + PPIVEED RKLPKL                       DDD+ADY+RTGLTPRW+
Sbjct: 272 PYFANSPPIVEEDGRKLPKL-----------------------DDDSADYIRTGLTPRWS 308

Query: 362 DLDLNQHVNNVKYIGWILESS-ISMLENHELAGIALEYRKECRKDNVLQSLTAVSKDGAN 538
           DLD+NQHVNNVKYIGWILES+ + +LE+HEL+ + LEYR+EC +D+VLQSLTAVS  G  
Sbjct: 309 DLDINQHVNNVKYIGWILESAPLPILESHELSTMTLEYRRECGRDSVLQSLTAVSGAGIT 368

Query: 539 DLP-----ECVHLLRLENGPEIVRGRTLWRPKRINNYGSVGQIPA 658
           +L      EC HLLRLENG EIVRGRT WRPK   N+G + QIPA
Sbjct: 369 NLADAGDIECQHLLRLENGAEIVRGRTEWRPKHATNFGMLDQIPA 413


>emb|CBI28125.3| unnamed protein product [Vitis vinifera]
          Length = 408

 Score =  280 bits (715), Expect = 6e-73
 Identities = 143/227 (62%), Positives = 167/227 (73%), Gaps = 6/227 (2%)
 Frame = +2

Query: 2   VVQVDTWVAPNGKNGMRRDWLIRDGISGETLARASSVWVLMNTSTRKLSKLPDEVRVEIE 181
           VVQVDTWV  +GKNGMRRDW+IRD  +GETL RASSVWV+MN  TR+LSK+PD VR EIE
Sbjct: 204 VVQVDTWVCASGKNGMRRDWIIRDCKTGETLTRASSVWVMMNKQTRRLSKIPDAVRAEIE 263

Query: 182 PYYMDCPPIVEEDSRKLPKLXXXXXXXXXXXXXXXXXXXXXXXDDDTADYVRTGLTPRWN 361
           PY+MD  PIV+ED RKLPKL                       DD TADY+RTGLTPRW+
Sbjct: 264 PYFMDSAPIVDEDGRKLPKL-----------------------DDSTADYIRTGLTPRWS 300

Query: 362 DLDLNQHVNNVKYIGWILESS-ISMLENHELAGIALEYRKECRKDNVLQSLTAVSKDGAN 538
           DLD+NQHVNNVKYIGWILES+ + +LE+HEL+ + LEYR+EC +D+VLQSLTAV   G  
Sbjct: 301 DLDVNQHVNNVKYIGWILESAPLPILESHELSSMTLEYRRECGRDSVLQSLTAVCGTGVG 360

Query: 539 DL-----PECVHLLRLENGPEIVRGRTLWRPKRINNYGSVGQIPAES 664
           +L      EC HLLRLE G EIV+GRT WRPK  ++ G VGQIPAES
Sbjct: 361 NLLDCGNVECQHLLRLEEGAEIVKGRTEWRPKYAHSMGGVGQIPAES 407


>ref|XP_002284850.1| PREDICTED: myristoyl-acyl carrier protein thioesterase,
           chloroplastic [Vitis vinifera]
          Length = 421

 Score =  280 bits (715), Expect = 6e-73
 Identities = 143/227 (62%), Positives = 167/227 (73%), Gaps = 6/227 (2%)
 Frame = +2

Query: 2   VVQVDTWVAPNGKNGMRRDWLIRDGISGETLARASSVWVLMNTSTRKLSKLPDEVRVEIE 181
           VVQVDTWV  +GKNGMRRDW+IRD  +GETL RASSVWV+MN  TR+LSK+PD VR EIE
Sbjct: 217 VVQVDTWVCASGKNGMRRDWIIRDCKTGETLTRASSVWVMMNKQTRRLSKIPDAVRAEIE 276

Query: 182 PYYMDCPPIVEEDSRKLPKLXXXXXXXXXXXXXXXXXXXXXXXDDDTADYVRTGLTPRWN 361
           PY+MD  PIV+ED RKLPKL                       DD TADY+RTGLTPRW+
Sbjct: 277 PYFMDSAPIVDEDGRKLPKL-----------------------DDSTADYIRTGLTPRWS 313

Query: 362 DLDLNQHVNNVKYIGWILESS-ISMLENHELAGIALEYRKECRKDNVLQSLTAVSKDGAN 538
           DLD+NQHVNNVKYIGWILES+ + +LE+HEL+ + LEYR+EC +D+VLQSLTAV   G  
Sbjct: 314 DLDVNQHVNNVKYIGWILESAPLPILESHELSSMTLEYRRECGRDSVLQSLTAVCGTGVG 373

Query: 539 DL-----PECVHLLRLENGPEIVRGRTLWRPKRINNYGSVGQIPAES 664
           +L      EC HLLRLE G EIV+GRT WRPK  ++ G VGQIPAES
Sbjct: 374 NLLDCGNVECQHLLRLEEGAEIVKGRTEWRPKYAHSMGGVGQIPAES 420


>ref|XP_002515564.1| palmitoyl-acyl carrier protein thioesterase [Ricinus communis]
           gi|157417724|gb|ABV54795.1| acyl-ACP thioesterase
           [Ricinus communis] gi|223545508|gb|EEF47013.1|
           palmitoyl-acyl carrier protein thioesterase [Ricinus
           communis]
          Length = 419

 Score =  278 bits (711), Expect = 2e-72
 Identities = 142/227 (62%), Positives = 170/227 (74%), Gaps = 6/227 (2%)
 Frame = +2

Query: 2   VVQVDTWVAPNGKNGMRRDWLIRDGISGETLARASSVWVLMNTSTRKLSKLPDEVRVEIE 181
           VVQVDTWV+ +GKNGMRRDW +RD  +GETL RASSVWV+MN  TR+LSK+P+EVR EIE
Sbjct: 215 VVQVDTWVSKSGKNGMRRDWCVRDSRTGETLTRASSVWVMMNKLTRRLSKIPEEVRGEIE 274

Query: 182 PYYMDCPPIVEEDSRKLPKLXXXXXXXXXXXXXXXXXXXXXXXDDDTADYVRTGLTPRWN 361
           PY+++  PIV+EDSRKLPKL                       DD  ADYVR GLTPRW+
Sbjct: 275 PYFLNSDPIVDEDSRKLPKL-----------------------DDSNADYVRKGLTPRWS 311

Query: 362 DLDLNQHVNNVKYIGWILESS-ISMLENHELAGIALEYRKECRKDNVLQSLTAVSKDGAN 538
           DLD+NQHVNNVKYIGWILES+ + +LE+HEL+ I LEYR+EC +D+VLQSLTAVS +G  
Sbjct: 312 DLDINQHVNNVKYIGWILESAPLPILESHELSAITLEYRRECGRDSVLQSLTAVSGNGIG 371

Query: 539 DLP-----ECVHLLRLENGPEIVRGRTLWRPKRINNYGSVGQIPAES 664
           +L      EC HLLRLE+G EIVRGRT WRPK  +N+G +GQIP ES
Sbjct: 372 NLGNAGDIECQHLLRLEDGAEIVRGRTEWRPKYSSNFGIMGQIPVES 418


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