BLASTX nr result

ID: Coptis25_contig00005880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005880
         (1244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278829.1| PREDICTED: triose phosphate/phosphate transl...   590   e-166
emb|CAN65381.1| hypothetical protein VITISV_028555 [Vitis vinifera]   590   e-166
ref|XP_002509428.1| Triose phosphate/phosphate translocator, chl...   582   e-164
ref|XP_002329840.1| predicted protein [Populus trichocarpa] gi|2...   574   e-161
sp|P49131.1|TPT_FLAPR RecName: Full=Triose phosphate/phosphate t...   571   e-160

>ref|XP_002278829.1| PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic
            [Vitis vinifera] gi|297740430|emb|CBI30612.3| unnamed
            protein product [Vitis vinifera]
          Length = 406

 Score =  590 bits (1521), Expect = e-166
 Identities = 307/406 (75%), Positives = 337/406 (83%), Gaps = 5/406 (1%)
 Frame = +3

Query: 42   MESKVLTNTTTIPTGLLRLRKPVRGKSVTFTVVKPIARDVKVAGGGNLIWGRQLRPALLL 221
            MES+VL+  TTI +GL+RLRKPVR  +V F   +PI     V  GGNLIWGRQLRPAL+L
Sbjct: 1    MESRVLSGATTI-SGLVRLRKPVRD-TVCFAPARPIGA---VGDGGNLIWGRQLRPALIL 55

Query: 222  EKSPVIKTSSVKRLXXXXXXXXX----EGSDG-GVVKVGFLEKYPFLITGFFFFMWYFLN 386
            E +PV+  ++ KR              EGSD  G  K+GFL+KYP L+TGFFFFMWYFLN
Sbjct: 56   ESAPVVGMTTGKREILRPTMASTSSPAEGSDSAGDAKIGFLDKYPALVTGFFFFMWYFLN 115

Query: 387  VIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWAVGLPKRAPMDSNQLKLLIPVAVC 566
            VIFNILNKKIYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAP+DSN LKLLIPVAVC
Sbjct: 116  VIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWGVGLPKRAPIDSNLLKLLIPVAVC 175

Query: 567  HALGHVTSNVSFAAVAVSFTHTIKSLEPFFNASASQFILGQQIPLSLWLSLAPVVIGVSM 746
            HALGHVTSNVSFAAVAVSFTHTIK+LEPFFNA+ASQFILGQ IPL+LWLSLAPVV+GVSM
Sbjct: 176  HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVLGVSM 235

Query: 747  ASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIIALIVCIPPAII 926
            ASLTELSFNW+GFISAMISNISFTYRSIYSKKAMTDMDSTN+YAYISIIALIVCIPPA+I
Sbjct: 236  ASLTELSFNWIGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPALI 295

Query: 927  LEGPQLMKHGISDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLK 1106
            +EGPQLMKHG +DAIAKVG+TKF+SDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLK
Sbjct: 296  VEGPQLMKHGFNDAIAKVGLTKFLSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLK 355

Query: 1107 RXXXXXXXXXXXXNKISXXXXXXXXXXXXXVAIYSYLKAKIEEEKR 1244
            R            NKIS             VA+YS++KAK+EEEKR
Sbjct: 356  RVFVIGFSILVFGNKISTQTGIGTCVAIAGVAMYSFIKAKMEEEKR 401


>emb|CAN65381.1| hypothetical protein VITISV_028555 [Vitis vinifera]
          Length = 443

 Score =  590 bits (1521), Expect = e-166
 Identities = 307/406 (75%), Positives = 337/406 (83%), Gaps = 5/406 (1%)
 Frame = +3

Query: 42   MESKVLTNTTTIPTGLLRLRKPVRGKSVTFTVVKPIARDVKVAGGGNLIWGRQLRPALLL 221
            MES+VL+  TTI +GL+RLRKPVR  +V F   +PI     V  GGNLIWGRQLRPAL+L
Sbjct: 1    MESRVLSGATTI-SGLVRLRKPVRD-TVCFAPARPIGA---VGDGGNLIWGRQLRPALIL 55

Query: 222  EKSPVIKTSSVKRLXXXXXXXXX----EGSDG-GVVKVGFLEKYPFLITGFFFFMWYFLN 386
            E +PV+  ++ KR              EGSD  G  K+GFL+KYP L+TGFFFFMWYFLN
Sbjct: 56   ESAPVVGMTTGKREILRPTMASTSSPAEGSDSAGDAKIGFLDKYPALVTGFFFFMWYFLN 115

Query: 387  VIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWAVGLPKRAPMDSNQLKLLIPVAVC 566
            VIFNILNKKIYNYFPYPYFVSVIHL VGVVYCLVSW VGLPKRAP+DSN LKLLIPVAVC
Sbjct: 116  VIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWGVGLPKRAPIDSNLLKLLIPVAVC 175

Query: 567  HALGHVTSNVSFAAVAVSFTHTIKSLEPFFNASASQFILGQQIPLSLWLSLAPVVIGVSM 746
            HALGHVTSNVSFAAVAVSFTHTIK+LEPFFNA+ASQFILGQ IPL+LWLSLAPVV+GVSM
Sbjct: 176  HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVLGVSM 235

Query: 747  ASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIIALIVCIPPAII 926
            ASLTELSFNW+GFISAMISNISFTYRSIYSKKAMTDMDSTN+YAYISIIALIVCIPPA+I
Sbjct: 236  ASLTELSFNWIGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPALI 295

Query: 927  LEGPQLMKHGISDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLK 1106
            +EGPQLMKHG +DAIAKVG+TKF+SDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLK
Sbjct: 296  VEGPQLMKHGFNDAIAKVGLTKFLSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLK 355

Query: 1107 RXXXXXXXXXXXXNKISXXXXXXXXXXXXXVAIYSYLKAKIEEEKR 1244
            R            NKIS             VA+YS++KAK+EEEKR
Sbjct: 356  RVFVIGFSILVFGNKISTQTGIGTCVAIAGVAMYSFIKAKMEEEKR 401


>ref|XP_002509428.1| Triose phosphate/phosphate translocator, chloroplast precursor,
            putative [Ricinus communis] gi|223549327|gb|EEF50815.1|
            Triose phosphate/phosphate translocator, chloroplast
            precursor, putative [Ricinus communis]
          Length = 406

 Score =  582 bits (1500), Expect = e-164
 Identities = 305/405 (75%), Positives = 328/405 (80%), Gaps = 4/405 (0%)
 Frame = +3

Query: 42   MESKVLTNTTTIPTGLLRLRKPVRGKSVT-FTVVKPIARDVKVAGGGNLIWGRQLRPALL 218
            MES+VL+  TT  + L  LR+P+R  + T F  +KPI     V  GGNLIWGRQLRP+LL
Sbjct: 1    MESRVLSRATTTLSSLPHLRRPMRESNTTSFVSMKPIGT---VGEGGNLIWGRQLRPSLL 57

Query: 219  LEKSPVIKTSSVKRLXXXXXXXXXEGSDGG---VVKVGFLEKYPFLITGFFFFMWYFLNV 389
            LE SP  K  ++ R          EGSD     V  VGF EKYP L+TGFFFFMWYFLNV
Sbjct: 58   LESSPATKRENL-RPTMAAASSPAEGSDSSGDKVAPVGFFEKYPALVTGFFFFMWYFLNV 116

Query: 390  IFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWAVGLPKRAPMDSNQLKLLIPVAVCH 569
            IFNILNKKIYNYFPYPYFVSVIHL VGVVYCLVSWAVGLPKRAP+DSN LKLLIPVAVCH
Sbjct: 117  IFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSNLLKLLIPVAVCH 176

Query: 570  ALGHVTSNVSFAAVAVSFTHTIKSLEPFFNASASQFILGQQIPLSLWLSLAPVVIGVSMA 749
            ALGHVTSNVSFAAVAVSFTHTIK+LEPFFNA+ASQFILGQ IP++LWLSLAPVVIGVSMA
Sbjct: 177  ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMA 236

Query: 750  SLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIIALIVCIPPAIIL 929
            SLTELSFNW+GFISAMISNISFTYRSIYSKKAMTDMDSTN+YAYISIIAL VCIPPAII 
Sbjct: 237  SLTELSFNWIGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIF 296

Query: 930  EGPQLMKHGISDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKR 1109
            EGPQLMK+G +DAIAKVG TKFI+DLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKR
Sbjct: 297  EGPQLMKYGFNDAIAKVGTTKFITDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKR 356

Query: 1110 XXXXXXXXXXXXNKISXXXXXXXXXXXXXVAIYSYLKAKIEEEKR 1244
                        NKIS             VA+YS+LKAKIEEEKR
Sbjct: 357  VFVIGFSIVVFGNKISTQTGIGTCIAIAGVAMYSFLKAKIEEEKR 401


>ref|XP_002329840.1| predicted protein [Populus trichocarpa] gi|222870902|gb|EEF08033.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score =  574 bits (1480), Expect = e-161
 Identities = 302/406 (74%), Positives = 324/406 (79%), Gaps = 5/406 (1%)
 Frame = +3

Query: 42   MESKVLTNTTTIPTGLLRLRKPVRGKSVTFTVVKPIARDVKVAGGGNLIWGRQLRPALLL 221
            MES+VL+  TT+      LR+     S +F  +KPI     V+ GGNLIWG QLRP+LLL
Sbjct: 1    MESRVLSRATTVAHVRRPLRESNGNASCSFLSIKPIGA---VSEGGNLIWGTQLRPSLLL 57

Query: 222  EKS-PVIKTSSVKRLXXXXXXXXXEGSD----GGVVKVGFLEKYPFLITGFFFFMWYFLN 386
            E S PV     +            EGSD    G V  VGF +KYP L+TGFFFFMWYFLN
Sbjct: 58   EASYPVTARKEILWPVMAAASSPAEGSDSSGDGKVAPVGFFDKYPALVTGFFFFMWYFLN 117

Query: 387  VIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWAVGLPKRAPMDSNQLKLLIPVAVC 566
            VIFNILNKKIYNYFPYPYFVSVIHL VGVVYCLVSWAVGLPKRAPMDSN LKLLIPVAVC
Sbjct: 118  VIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWAVGLPKRAPMDSNLLKLLIPVAVC 177

Query: 567  HALGHVTSNVSFAAVAVSFTHTIKSLEPFFNASASQFILGQQIPLSLWLSLAPVVIGVSM 746
            HALGHVTSNVSFAAVAVSFTHTIK+LEPFFNA+ASQFILGQQIP++LWLSLAPVV+GVS+
Sbjct: 178  HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQIPITLWLSLAPVVLGVSV 237

Query: 747  ASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIIALIVCIPPAII 926
            ASLTELSFNW GFISAMISNISFTYRSIYSKKAMTDMDSTN+YAYISIIALIVCIPPAII
Sbjct: 238  ASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPAII 297

Query: 927  LEGPQLMKHGISDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLK 1106
            LEGPQL+KHG SD IAKVG+TKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLK
Sbjct: 298  LEGPQLIKHGFSDGIAKVGLTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLK 357

Query: 1107 RXXXXXXXXXXXXNKISXXXXXXXXXXXXXVAIYSYLKAKIEEEKR 1244
            R            NKIS             VA YSY+KAK+EEEKR
Sbjct: 358  RVFVIGFSIVIFGNKISTQTGIGTAVAIAGVATYSYIKAKLEEEKR 403


>sp|P49131.1|TPT_FLAPR RecName: Full=Triose phosphate/phosphate translocator, chloroplastic;
            Short=cTPT; Flags: Precursor gi|406286|emb|CAA81386.1|
            triose phosphate/phosphate translocator [Flaveria
            pringlei]
          Length = 408

 Score =  571 bits (1471), Expect = e-160
 Identities = 300/404 (74%), Positives = 321/404 (79%), Gaps = 3/404 (0%)
 Frame = +3

Query: 42   MESKVLTNTTTIPTGLLRLRKPVRGKSVTFTVVKPIARDVKVAGGGNLIWGRQLRPALLL 221
            MES+VL++  T  +G+ RL +P  G++ T TVV   +       GGNL+WGRQLRP+LL 
Sbjct: 1    MESRVLSSGATTISGIPRLTRPA-GRTTTTTVVAVASPAKLNTNGGNLVWGRQLRPSLLN 59

Query: 222  --EKSPV-IKTSSVKRLXXXXXXXXXEGSDGGVVKVGFLEKYPFLITGFFFFMWYFLNVI 392
                SPV + T  VKR            S G    VGF  KYPFL+TGFFFFMWYFLNVI
Sbjct: 60   LDHSSPVSLVTKPVKRDVLKPCTATASDSAGDAAPVGFFAKYPFLVTGFFFFMWYFLNVI 119

Query: 393  FNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWAVGLPKRAPMDSNQLKLLIPVAVCHA 572
            FNILNKKIYNYFPYPYFVS IHLAVGVVYCL  WAVGLPKRAPMDSN LKLLIPVA CHA
Sbjct: 120  FNILNKKIYNYFPYPYFVSAIHLAVGVVYCLGGWAVGLPKRAPMDSNLLKLLIPVAFCHA 179

Query: 573  LGHVTSNVSFAAVAVSFTHTIKSLEPFFNASASQFILGQQIPLSLWLSLAPVVIGVSMAS 752
            LGHVTSNVSFAAVAVSFTHTIKSLEPFFNA+ASQFILGQ IP++LWLSLAPVVIGVSMAS
Sbjct: 180  LGHVTSNVSFAAVAVSFTHTIKSLEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMAS 239

Query: 753  LTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIIALIVCIPPAIILE 932
            LTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISII+L+ CIPPAIILE
Sbjct: 240  LTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIISLLFCIPPAIILE 299

Query: 933  GPQLMKHGISDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRX 1112
            GPQL+KHG SDAIAKVGMTKFISDLFWVGMFYHLYNQLA NTLERVAPLTHAVGNVLKR 
Sbjct: 300  GPQLLKHGFSDAIAKVGMTKFISDLFWVGMFYHLYNQLAINTLERVAPLTHAVGNVLKRV 359

Query: 1113 XXXXXXXXXXXNKISXXXXXXXXXXXXXVAIYSYLKAKIEEEKR 1244
                       NKIS             VA+YS +KAKIEEEKR
Sbjct: 360  FVIGFSIIVFGNKISTQTAIGTSIAIAGVAVYSLIKAKIEEEKR 403


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