BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005879
         (2480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17917.3| unnamed protein product [Vitis vinifera]              407   e-111
ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g...   407   e-111
ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [...   373   e-100
ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [...   370   1e-99
ref|XP_002330818.1| predicted protein [Populus trichocarpa] gi|2...   370   1e-99

>emb|CBI17917.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score =  407 bits (1047), Expect = e-111
 Identities = 222/330 (67%), Positives = 264/330 (80%), Gaps = 4/330 (1%)
 Frame = -1

Query: 980 LISGKEEREAQISPAMNAVLREFKRIIGLSKTXXXXXXXXXXA---CSIRLLVASSQAIN 810
           LISG+EE EA +SPAM+AV+R FKR+ GLS++              CSIRLLVAS+QAIN
Sbjct: 24  LISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVASTQAIN 83

Query: 809 LIGKQGSQIKAIQESSGASVRVLSGDEVPHYATSDERVVEIQGESLKVLKALEAVIGHLR 630
           LIGKQGS IK+IQES+GASVRVLSGDEVP YA +DER+VE+QGE+LKV KALEAV+GHLR
Sbjct: 84  LIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGHLR 143

Query: 629 KFLVDHSIIPLFEKVNNPTVSQERPAETWADKAQSLVQTASQVTSQAGITSDYPLSIKRD 450
           KFLVDHS++PLFE+  N T+SQ+R ++TWADK  SL+      TSQ G+ SDY L  KR+
Sbjct: 144 KFLVDHSVLPLFERTYNATISQDRQSDTWADK--SLLHG----TSQTGMGSDYSLPAKRE 197

Query: 449 SLFLDRDTQLESQMHHSSLSLYGQDPGFPGLRTSGLSRASAAIISQITQTMQIPLAYAED 270
           SL+LDR+TQ+E    HS L +YGQ+ G  G+R+SGL RA A I++QI QTMQIPL+YAED
Sbjct: 198 SLYLDRETQME----HSGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQTMQIPLSYAED 253

Query: 269 XXXXXXXXXXXIRRTSGAILTVQESRGLPDEITVEIKGTTSQVQTAQQLIQDFLAGHKDP 90
                      IRRTSGAILTVQESRGLPDEITVEIKGT+SQVQTAQQLIQ+F++ HK+P
Sbjct: 254 IIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTAQQLIQEFISNHKEP 313

Query: 89  VSSSYGKMDTGLR-SYSQLGNTSYSSSSLA 3
           V SSYGKMD+GLR SYSQLGNTSYSSSSL+
Sbjct: 314 VPSSYGKMDSGLRSSYSQLGNTSYSSSSLS 343


>ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
            vinifera]
          Length = 466

 Score =  407 bits (1047), Expect = e-111
 Identities = 222/330 (67%), Positives = 264/330 (80%), Gaps = 4/330 (1%)
 Frame = -1

Query: 980  LISGKEEREAQISPAMNAVLREFKRIIGLSKTXXXXXXXXXXA---CSIRLLVASSQAIN 810
            LISG+EE EA +SPAM+AV+R FKR+ GLS++              CSIRLLVAS+QAIN
Sbjct: 126  LISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVASTQAIN 185

Query: 809  LIGKQGSQIKAIQESSGASVRVLSGDEVPHYATSDERVVEIQGESLKVLKALEAVIGHLR 630
            LIGKQGS IK+IQES+GASVRVLSGDEVP YA +DER+VE+QGE+LKV KALEAV+GHLR
Sbjct: 186  LIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGHLR 245

Query: 629  KFLVDHSIIPLFEKVNNPTVSQERPAETWADKAQSLVQTASQVTSQAGITSDYPLSIKRD 450
            KFLVDHS++PLFE+  N T+SQ+R ++TWADK  SL+      TSQ G+ SDY L  KR+
Sbjct: 246  KFLVDHSVLPLFERTYNATISQDRQSDTWADK--SLLHG----TSQTGMGSDYSLPAKRE 299

Query: 449  SLFLDRDTQLESQMHHSSLSLYGQDPGFPGLRTSGLSRASAAIISQITQTMQIPLAYAED 270
            SL+LDR+TQ+E    HS L +YGQ+ G  G+R+SGL RA A I++QI QTMQIPL+YAED
Sbjct: 300  SLYLDRETQME----HSGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQTMQIPLSYAED 355

Query: 269  XXXXXXXXXXXIRRTSGAILTVQESRGLPDEITVEIKGTTSQVQTAQQLIQDFLAGHKDP 90
                       IRRTSGAILTVQESRGLPDEITVEIKGT+SQVQTAQQLIQ+F++ HK+P
Sbjct: 356  IIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTAQQLIQEFISNHKEP 415

Query: 89   VSSSYGKMDTGLR-SYSQLGNTSYSSSSLA 3
            V SSYGKMD+GLR SYSQLGNTSYSSSSL+
Sbjct: 416  VPSSYGKMDSGLRSSYSQLGNTSYSSSSLS 445


>ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 436

 Score =  373 bits (958), Expect = e-100
 Identities = 205/329 (62%), Positives = 254/329 (77%), Gaps = 3/329 (0%)
 Frame = -1

Query: 980  LISGKEEREAQISPAMNAVLREFKRIIGLSKTXXXXXXXXXXACSIRLLVASSQAINLIG 801
            LISGKE+ EA +SPAM+AV+R FKR+ G S+            CS+RLLVAS+QAINLIG
Sbjct: 94   LISGKEDLEAPLSPAMDAVIRVFKRVSGFSEIDAKNKASAVAFCSVRLLVASTQAINLIG 153

Query: 800  KQGSQIKAIQESSGASVRVLSGDEVPHYATSDERVVEIQGESLKVLKALEAVIGHLRKFL 621
            KQGS IK+IQE++GASVRVLSGDEVP YA +DER+VE+QGE++KVLKALEAV+GHLRKFL
Sbjct: 154  KQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFL 213

Query: 620  VDHSIIPLFEKVNNPTVSQERPAE-TWADKAQSLVQTASQVTSQAGITSDYPLSIKRDSL 444
            VD+S++PLFEK  N T+SQER A+ TW DK       +    SQ  I +D PLS KRDSL
Sbjct: 214  VDNSVLPLFEKTYNATISQERQADTTWVDK------PSLHSASQPSIVTDIPLSTKRDSL 267

Query: 443  FLDRDTQLESQMHHSSLSLYGQDPGFPGLRTSGLSRASA-AIISQITQTMQIPLAYAEDX 267
            F DR++QL+S +  S++S+YGQD    GLR+S LSR SA  I++ + QTMQIPL+YAED 
Sbjct: 268  FADRESQLDSLLPPSTMSMYGQDSSLSGLRSSALSRPSAPPIVTTVIQTMQIPLSYAEDI 327

Query: 266  XXXXXXXXXXIRRTSGAILTVQESRGLPDEITVEIKGTTSQVQTAQQLIQDFLAGHKDPV 87
                      IRRTSGAILTVQESR +PDEI VEIKGT+SQVQTAQQLIQ+ ++ H +PV
Sbjct: 328  IGIQGTNIEYIRRTSGAILTVQESR-VPDEIIVEIKGTSSQVQTAQQLIQEVISNHTEPV 386

Query: 86   SSSYGKMDTGLR-SYSQLGNTSYSSSSLA 3
            +S+Y ++DTGLR SY QLG++SYSSSSL+
Sbjct: 387  ASNYSRLDTGLRSSYPQLGSSSYSSSSLS 415


>ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 436

 Score =  370 bits (949), Expect = 1e-99
 Identities = 204/329 (62%), Positives = 252/329 (76%), Gaps = 3/329 (0%)
 Frame = -1

Query: 980  LISGKEEREAQISPAMNAVLREFKRIIGLSKTXXXXXXXXXXACSIRLLVASSQAINLIG 801
            LISGKEE EA +SPAMNAV+R FKR+ G S+            CS+RLLVAS+QAINLIG
Sbjct: 94   LISGKEEPEAPLSPAMNAVIRVFKRVSGFSEIDAENKASAVAFCSVRLLVASTQAINLIG 153

Query: 800  KQGSQIKAIQESSGASVRVLSGDEVPHYATSDERVVEIQGESLKVLKALEAVIGHLRKFL 621
            KQGS IK+IQE++GASVRVLSGDEVP YA +DER+VE+QGE++KVLKALEAV+GHLRKFL
Sbjct: 154  KQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFL 213

Query: 620  VDHSIIPLFEKVNNPTVSQERPAE-TWADKAQSLVQTASQVTSQAGITSDYPLSIKRDSL 444
            VD+S++PLFEK  N T+SQE  A+ TW DK       +    SQ  I +D PLS KRDSL
Sbjct: 214  VDNSVLPLFEKTYNATISQEHQADTTWVDK------PSLHSASQPSIVTDLPLSTKRDSL 267

Query: 443  FLDRDTQLESQMHHSSLSLYGQDPGFPGLRTSGLSRASA-AIISQITQTMQIPLAYAEDX 267
            F DR++QL+S +  S++S+YGQD    GLR+S LSR SA  I++ + QTMQIPL+YAED 
Sbjct: 268  FADRESQLDSLLPPSTMSIYGQDSSLSGLRSSALSRPSAPPIVTTVIQTMQIPLSYAEDI 327

Query: 266  XXXXXXXXXXIRRTSGAILTVQESRGLPDEITVEIKGTTSQVQTAQQLIQDFLAGHKDPV 87
                      IR TSGAILTVQES  +PDEI VEIKGT+SQVQTAQQLIQ+ ++ HK+P+
Sbjct: 328  IGIQGTNIEYIRCTSGAILTVQES-PVPDEIIVEIKGTSSQVQTAQQLIQEVISNHKEPL 386

Query: 86   SSSYGKMDTGLR-SYSQLGNTSYSSSSLA 3
            +S+Y ++DTGLR SY QLG++SYSSSSL+
Sbjct: 387  ASNYSRLDTGLRSSYPQLGSSSYSSSSLS 415


>ref|XP_002330818.1| predicted protein [Populus trichocarpa] gi|222872620|gb|EEF09751.1|
            predicted protein [Populus trichocarpa]
          Length = 405

 Score =  370 bits (949), Expect = 1e-99
 Identities = 198/329 (60%), Positives = 240/329 (72%), Gaps = 5/329 (1%)
 Frame = -1

Query: 980  LISGKEEREAQISPAMNAVLREFKRIIGLS-----KTXXXXXXXXXXACSIRLLVASSQA 816
            LISGKEE EA  SPAM+AV+R FKR+ GLS      T           CSIRLLVASSQA
Sbjct: 59   LISGKEEPEAPQSPAMDAVMRVFKRVSGLSPGEGDNTGSAAAAAGSAFCSIRLLVASSQA 118

Query: 815  INLIGKQGSQIKAIQESSGASVRVLSGDEVPHYATSDERVVEIQGESLKVLKALEAVIGH 636
            INLIGKQGS IK+IQE++GA+V V++ DE+P YATSDER+VEI GE++KV KALEAVIG 
Sbjct: 119  INLIGKQGSIIKSIQENTGAAVHVMAEDELPSYATSDERIVEIHGEAMKVFKALEAVIGQ 178

Query: 635  LRKFLVDHSIIPLFEKVNNPTVSQERPAETWADKAQSLVQTASQVTSQAGITSDYPLSIK 456
            LRKFLVDHS+IP+FEK  N T+SQE PA+   D AQ  + +A   T  +GI SDY LS K
Sbjct: 179  LRKFLVDHSVIPIFEKTYNATISQECPADARPDIAQPSLHSAYVPTIPSGIASDYSLSFK 238

Query: 455  RDSLFLDRDTQLESQMHHSSLSLYGQDPGFPGLRTSGLSRASAAIISQITQTMQIPLAYA 276
            RD    + +TQ E ++    LS+YGQDPG  G R++GL RA+A I++Q+TQTMQ+PL+YA
Sbjct: 239  RDPSIYEHETQFEHKISQPGLSIYGQDPGIVGFRSTGLGRAAAPIVTQVTQTMQVPLSYA 298

Query: 275  EDXXXXXXXXXXXIRRTSGAILTVQESRGLPDEITVEIKGTTSQVQTAQQLIQDFLAGHK 96
            ED           IRRTS AIL++QESRGLPDEITVEIKGT +QVQ AQQLIQ+F+  HK
Sbjct: 299  EDIIGVAGSNIAYIRRTSRAILSIQESRGLPDEITVEIKGTGAQVQMAQQLIQEFITNHK 358

Query: 95   DPVSSSYGKMDTGLRSYSQLGNTSYSSSS 9
            +P SS YGK+D GL +YS +  T Y SSS
Sbjct: 359  EPASSMYGKIDAGLSAYSHMAETGYPSSS 387