BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005877
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155661.1| PREDICTED: pentatricopeptide repeat-containi...    80   1e-13
ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...    79   3e-13
emb|CBI41008.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_004134964.1| PREDICTED: uncharacterized protein LOC101207...    78   7e-13
ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...    78   7e-13

>ref|XP_004155661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Cucumis sativus]
          Length = 398

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 4/67 (5%)
 Frame = +3

Query: 6   KFDDITKQGFAMRLISLYGKPGMFDHALKLFDELP----ERTVKTYNALLNASVVSNKFD 173
           K++DI  +GFA RLI LYGK GMF HA KLFDELP    ERTVK++N+LL + V S +FD
Sbjct: 102 KYEDIKVEGFATRLIKLYGKAGMFSHARKLFDELPELNCERTVKSFNSLLASCVKSKEFD 161

Query: 174 ETHKLFR 194
           +  K+FR
Sbjct: 162 QVEKIFR 168


>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial [Vitis vinifera]
          Length = 383

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/66 (59%), Positives = 50/66 (75%), Gaps = 4/66 (6%)
 Frame = +3

Query: 6   KFDDITKQGFAMRLISLYGKPGMFDHALKLFDELP----ERTVKTYNALLNASVVSNKFD 173
           K+ DI+++GFA+RLISLYGK GMFDHA K+FDE+P    ER+V ++NALL A V S KFD
Sbjct: 87  KYKDISREGFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFD 146

Query: 174 ETHKLF 191
           +    F
Sbjct: 147 KVEGFF 152


>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/67 (58%), Positives = 51/67 (76%), Gaps = 4/67 (5%)
 Frame = +3

Query: 6   KFDDITKQGFAMRLISLYGKPGMFDHALKLFDELP----ERTVKTYNALLNASVVSNKFD 173
           K+ DI+++GFA+RLISLYGK GMFDHA K+FDE+P    ER+V ++NALL A V S KFD
Sbjct: 95  KYKDISREGFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFD 154

Query: 174 ETHKLFR 194
           +    F+
Sbjct: 155 KIDGFFQ 161


>ref|XP_004134964.1| PREDICTED: uncharacterized protein LOC101207147 [Cucumis sativus]
          Length = 2802

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 4/67 (5%)
 Frame = +3

Query: 6    KFDDITKQGFAMRLISLYGKPGMFDHALKLFDELP----ERTVKTYNALLNASVVSNKFD 173
            K++DI  +GFA RLI LYGK GMF HA KLFDELP    ERTVK++N+LL + V S + D
Sbjct: 1339 KYEDIKVEGFATRLIKLYGKAGMFSHARKLFDELPELNCERTVKSFNSLLASCVKSKELD 1398

Query: 174  ETHKLFR 194
            +  K+FR
Sbjct: 1399 QVEKIFR 1405



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 4/67 (5%)
 Frame = +3

Query: 6    KFDDITKQGFAMRLISLYGKPGMFDHALKLFDELP----ERTVKTYNALLNASVVSNKFD 173
            K+D+I ++GF +RLI LYGK GMF  A KLFDELP    ERTV+++NALL + V S +FD
Sbjct: 959  KYDEIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFD 1018

Query: 174  ETHKLFR 194
            +  K+FR
Sbjct: 1019 QVEKIFR 1025



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/67 (55%), Positives = 50/67 (74%), Gaps = 4/67 (5%)
 Frame = +3

Query: 6    KFDDITKQGFAMRLISLYGKPGMFDHALKLFDELP----ERTVKTYNALLNASVVSNKFD 173
            K+++I ++GFA+RLI LYGK GMF HA KLFDELP    ERTVK++NALL +   S +F+
Sbjct: 1738 KYEEIKEEGFAIRLIKLYGKAGMFSHARKLFDELPELNCERTVKSFNALLTSCANSKEFE 1797

Query: 174  ETHKLFR 194
            +   +FR
Sbjct: 1798 QLETMFR 1804


>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Vitis vinifera]
          Length = 382

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/66 (57%), Positives = 50/66 (75%), Gaps = 4/66 (6%)
 Frame = +3

Query: 6   KFDDITKQGFAMRLISLYGKPGMFDHALKLFDELP----ERTVKTYNALLNASVVSNKFD 173
           K+ DI+++GFA+RLI+LYGK GMFDHA K+FDE+P    ER+V ++NALL A V S KFD
Sbjct: 87  KYKDISREGFAVRLITLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVNSKKFD 146

Query: 174 ETHKLF 191
           +    F
Sbjct: 147 KVEGFF 152