BLASTX nr result

ID: Coptis25_contig00005875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005875
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140247.1| PREDICTED: probable LRR receptor-like serine...   303   2e-80
emb|CBI22045.3| unnamed protein product [Vitis vinifera]              299   4e-79
ref|XP_002278131.2| PREDICTED: probable LRR receptor-like serine...   291   6e-77
ref|XP_002306015.1| predicted protein [Populus trichocarpa] gi|2...   287   1e-75
ref|XP_003519558.1| PREDICTED: probable LRR receptor-like serine...   287   1e-75

>ref|XP_004140247.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g07650-like [Cucumis sativus]
           gi|449481221|ref|XP_004156118.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At1g07650-like [Cucumis sativus]
          Length = 1028

 Score =  303 bits (775), Expect = 2e-80
 Identities = 143/218 (65%), Positives = 172/218 (78%)
 Frame = -1

Query: 656 KLVITEVNALKAIATKLGKRGWDFTVDPCSNKGNWTPITIPKGFENLIECDCSFKKNSTC 477
           KL   EV ALK I  KLGK  WDF +DPCS +G W  +   KGFE+ + CDCSF  NSTC
Sbjct: 37  KLHREEVKALKEIEKKLGKNDWDFNIDPCSGEGKWHVVNGRKGFESSVTCDCSFNHNSTC 96

Query: 476 HVTKIWLKAQNLSGFLPPELNKLRFLKSLDLGRNILSGSMPSEWATMQLEELSVMGNRLS 297
           H+  I LK+QNLSG +PPE +KLRFLK LDL RN L+G +PS+WATM+L ELS MGN+LS
Sbjct: 97  HIVAIALKSQNLSGIVPPEFSKLRFLKQLDLSRNCLTGFVPSQWATMRLVELSFMGNKLS 156

Query: 296 GPFPKVLSSIITLKNLSIEGNHFSGILPAELGNLINLEKLVISSNQFTGQLPKRLANLIN 117
           GPFPKVL++I TL+NLSIEGN FSG +P E+G L+NLEKLV+SSN  TG+LPK LA L N
Sbjct: 157 GPFPKVLTNITTLRNLSIEGNQFSGRIPPEIGKLVNLEKLVLSSNGLTGELPKGLAKLSN 216

Query: 116 LTDLRVSDNNISGRVPDFIRNWTQMERLHIQGSSLEGP 3
           LTD+R+SDNN SG++P+FI NW Q+E+LHIQG SLEGP
Sbjct: 217 LTDMRISDNNFSGKIPEFISNWAQIEKLHIQGCSLEGP 254


>emb|CBI22045.3| unnamed protein product [Vitis vinifera]
          Length = 1011

 Score =  299 bits (765), Expect = 4e-79
 Identities = 141/218 (64%), Positives = 175/218 (80%)
 Frame = -1

Query: 656 KLVITEVNALKAIATKLGKRGWDFTVDPCSNKGNWTPITIPKGFENLIECDCSFKKNSTC 477
           KL   E+ ALK I T+LGKR WDF  DPCS +GNW+ +   KG E+ + CDC+F  N++C
Sbjct: 24  KLPADELKALKVIGTRLGKRDWDFGKDPCSGEGNWSSVNEKKGVESSVTCDCTFHHNASC 83

Query: 476 HVTKIWLKAQNLSGFLPPELNKLRFLKSLDLGRNILSGSMPSEWATMQLEELSVMGNRLS 297
           HV  I LKAQNLSG LPPEL+KL  LK LDL RN+ SGS+PS+WATM+L ELS+MGNRLS
Sbjct: 84  HVVTIALKAQNLSGSLPPELSKLYHLKHLDLSRNLFSGSIPSQWATMRLVELSLMGNRLS 143

Query: 296 GPFPKVLSSIITLKNLSIEGNHFSGILPAELGNLINLEKLVISSNQFTGQLPKRLANLIN 117
           GPFPKVL++I TL+NLSIEGN FSG +P E+G LI +EK+V+SSN FTG+LP  LA L N
Sbjct: 144 GPFPKVLTNITTLRNLSIEGNLFSGPIPPEIGKLIRIEKMVLSSNAFTGELPVALAKLTN 203

Query: 116 LTDLRVSDNNISGRVPDFIRNWTQMERLHIQGSSLEGP 3
           LTD+R++DN+ SGR+P+FI NWT +++LHIQGSSLEGP
Sbjct: 204 LTDMRINDNHFSGRIPEFIGNWTHVQKLHIQGSSLEGP 241


>ref|XP_002278131.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g07650 [Vitis vinifera]
          Length = 999

 Score =  291 bits (746), Expect = 6e-77
 Identities = 141/224 (62%), Positives = 177/224 (79%), Gaps = 6/224 (2%)
 Frame = -1

Query: 656 KLVITEVNALKAIATKLGKRGWDFTVDPCSNKGNWTPITIPKGFENLIECDCSFKKNSTC 477
           KL   E+ ALK I T+LGKR WDF  DPCS +GNW+ +   KG E+ + CDC+F  N++C
Sbjct: 24  KLPADELKALKVIGTRLGKRDWDFGKDPCSGEGNWSSVNEKKGVESSVTCDCTFHHNASC 83

Query: 476 HV-TKIW-----LKAQNLSGFLPPELNKLRFLKSLDLGRNILSGSMPSEWATMQLEELSV 315
           HV T ++     LKAQNLSG LPPEL+KL  LK LDL RN+ SGS+PS+WATM+L ELS+
Sbjct: 84  HVVTMVYVNCRALKAQNLSGSLPPELSKLYHLKHLDLSRNLFSGSIPSQWATMRLVELSL 143

Query: 314 MGNRLSGPFPKVLSSIITLKNLSIEGNHFSGILPAELGNLINLEKLVISSNQFTGQLPKR 135
           MGNRLSGPFPKVL++I TL+NLSIEGN FSG +P E+G LI +EK+V+SSN FTG+LP  
Sbjct: 144 MGNRLSGPFPKVLTNITTLRNLSIEGNLFSGPIPPEIGKLIRIEKMVLSSNAFTGELPVA 203

Query: 134 LANLINLTDLRVSDNNISGRVPDFIRNWTQMERLHIQGSSLEGP 3
           LA L NLTD+R++DN+ SGR+P+FI NWT +++LHIQGSSLEGP
Sbjct: 204 LAKLTNLTDMRINDNHFSGRIPEFIGNWTHVQKLHIQGSSLEGP 247


>ref|XP_002306015.1| predicted protein [Populus trichocarpa] gi|222848979|gb|EEE86526.1|
           predicted protein [Populus trichocarpa]
          Length = 977

 Score =  287 bits (735), Expect = 1e-75
 Identities = 128/212 (60%), Positives = 166/212 (78%)
 Frame = -1

Query: 638 VNALKAIATKLGKRGWDFTVDPCSNKGNWTPITIPKGFENLIECDCSFKKNSTCHVTKIW 459
           V  L+ I  KLGK+ WDF  DPCS +GNW+ +   KGFEN + CDCSF  NS+CH+  I 
Sbjct: 1   VRVLREIGKKLGKKDWDFNKDPCSGEGNWSILDERKGFENSVTCDCSFNNNSSCHLVSIA 60

Query: 458 LKAQNLSGFLPPELNKLRFLKSLDLGRNILSGSMPSEWATMQLEELSVMGNRLSGPFPKV 279
           LK+QNLSG +PPE +K R+LK LDL RN+ +G +P +W T++LEE SVMGNRLSGPFPKV
Sbjct: 61  LKSQNLSGIIPPEFSKFRYLKQLDLSRNLFTGVIPPQWGTLRLEEFSVMGNRLSGPFPKV 120

Query: 278 LSSIITLKNLSIEGNHFSGILPAELGNLINLEKLVISSNQFTGQLPKRLANLINLTDLRV 99
           L+++ TL+NLSIEGNHFSG +P E+G LINL+KLV SSN  TG LP  L  L+NLTD+R+
Sbjct: 121 LTNMTTLRNLSIEGNHFSGPIPPEIGRLINLQKLVFSSNALTGNLPAELGKLVNLTDVRI 180

Query: 98  SDNNISGRVPDFIRNWTQMERLHIQGSSLEGP 3
           +DNN SG++P FI  WT++++LH+QG+SL+GP
Sbjct: 181 NDNNFSGKLPTFISKWTKVQKLHLQGTSLKGP 212


>ref|XP_003519558.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g07650-like [Glycine max]
          Length = 1025

 Score =  287 bits (734), Expect = 1e-75
 Identities = 136/219 (62%), Positives = 166/219 (75%)
 Frame = -1

Query: 659 PKLVITEVNALKAIATKLGKRGWDFTVDPCSNKGNWTPITIPKGFENLIECDCSFKKNST 480
           PKL   EV ALK I +K+GK+ WDF VDPCS KGNW      KGFE+ + CDCSF  NS+
Sbjct: 34  PKLNTQEVKALKEIGSKIGKKDWDFGVDPCSGKGNWNVSDARKGFESSVICDCSFDHNSS 93

Query: 479 CHVTKIWLKAQNLSGFLPPELNKLRFLKSLDLGRNILSGSMPSEWATMQLEELSVMGNRL 300
           CHV  I LKAQNLSG L P+ +KL  L+ LDL RNI++G++P +W TM+L ELS MGN+L
Sbjct: 94  CHVVSISLKAQNLSGSLSPDFSKLHHLQELDLSRNIITGAIPPQWGTMRLVELSFMGNKL 153

Query: 299 SGPFPKVLSSIITLKNLSIEGNHFSGILPAELGNLINLEKLVISSNQFTGQLPKRLANLI 120
           SGPFPKVL++I TL+NLSIEGN FSG +P E+G L NLEKL++SSN FTG LP  L+ L 
Sbjct: 154 SGPFPKVLTNITTLRNLSIEGNQFSGHIPTEIGKLTNLEKLILSSNGFTGALPPTLSKLT 213

Query: 119 NLTDLRVSDNNISGRVPDFIRNWTQMERLHIQGSSLEGP 3
            L DLR+SDNN  G++PDFI NWT +E+LH+ G SLEGP
Sbjct: 214 KLIDLRISDNNFFGKIPDFISNWTLIEKLHMHGCSLEGP 252



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 6/163 (3%)
 Frame = -1

Query: 476 HVTKIWLKAQNLSGFLPPELNKLRFLKSLDLGRNILSGSMP---SEWATMQLEELSVMGN 306
           ++ K+ L +   +G LPP L+KL  L  L +  N   G +P   S W    +E+L + G 
Sbjct: 190 NLEKLILSSNGFTGALPPTLSKLTKLIDLRISDNNFFGKIPDFISNWTL--IEKLHMHGC 247

Query: 305 RLSGPFPKVLSSIITLKNLSI---EGNHFSGILPAELGNLINLEKLVISSNQFTGQLPKR 135
            L GP P  +S++  L +L I   +G+  S   P  L NL +++ LV+      G++P  
Sbjct: 248 SLEGPIPSSISALTRLSDLRIADLKGSKSSAFPP--LNNLKSMKTLVLRKCMIKGEIPAY 305

Query: 134 LANLINLTDLRVSDNNISGRVPDFIRNWTQMERLHIQGSSLEG 6
           +  +  L  L +S N +SG +P+      +++ +++ G+ L G
Sbjct: 306 IGRMEKLKILDLSYNGLSGEIPESFAQLDKVDFMYLTGNKLSG 348


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