BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005870
         (3602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...  1479   0.0  
ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cu...  1463   0.0  
ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|2...  1429   0.0  
ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Gl...  1386   0.0  
ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus ...  1384   0.0  

>ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like [Vitis
            vinifera]
          Length = 1316

 Score = 1479 bits (3828), Expect = 0.0
 Identities = 767/1176 (65%), Positives = 910/1176 (77%), Gaps = 1/1176 (0%)
 Frame = +2

Query: 74   MSTVDKMLIKGIRSYSPDNKHVVTFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNAR 253
            MSTVDKMLIKGIRS+ P+NKHV+ FFKPLTLIVG NGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENKHVIAFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 254  SGHSFVHDPKVKGDTETKGQIKLRFKTAAGKDVVCIRSFQLTQKATKMEFKAIESVLQTI 433
            SGHSF+HDPKV G+TETKGQIKLRFKTAAGKDVVCIRSFQLTQKA+KME+KAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 434  NPHSGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDDANWPLQDPSTLKKKFDDI 613
            NPH+GEKVCLSYRCADMDREIPALMGVSKA+LENVIFVHQDDANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDI 180

Query: 614  FSATRYTKALEIIKKLHKDQAQEIKTYKLKLENLQVLKDAACKLRENIDEDQEETKTLKS 793
            FSATRYTKALE+IKKLHKDQAQEIKTYKLKLENLQ+LKDAA KLRE+I++DQE+T++LK 
Sbjct: 181  FSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQILKDAAYKLRESIEQDQEKTESLKI 240

Query: 794  QIQELERNVQKVEAKIQQTETTLKDLQDLRDQISTKTTERRTLFQLQQTQYAAXXXXXXX 973
            Q+QELE N+Q V+AKIQ TE TLKDL+ L+DQISTKT ER TLF+ QQ QYAA       
Sbjct: 241  QMQELENNIQNVDAKIQHTEATLKDLRKLQDQISTKTAERSTLFKEQQKQYAALAEENED 300

Query: 974  XXXXXXXWQTTFEEKIARLESRISKVEREMKDIEIKSSSLRGAIIQYSRDIGKLQQEAEA 1153
                   W+T FEE+IA LES+ISK+EREM D E K S L+  I  Y  +I KLQ EAE 
Sbjct: 301  TDEELNEWKTKFEERIALLESKISKLEREMDDTETKGSFLKQTINDYIWEISKLQTEAEV 360

Query: 1154 HMASRRDCDSTIEKLFAKHNLGHLPSTPFSNDVAFNLINRISTRMNELETDLKDKKKSNE 1333
            H + + + DSTI+KLFA++NLG LPS PFSN++A N  NRI TR+ +LE DL+DKKKS E
Sbjct: 361  HSSLKNERDSTIQKLFARNNLGSLPSVPFSNEIALNFTNRIKTRLMDLEKDLQDKKKSIE 420

Query: 1334 VELSALWASYMKACERCSKLGGQKSAKADAKITILNSINDKEKERDDTEAELSGLDIVRI 1513
            +EL   W  YM A +    +  QK AK + K  IL  I +KE ERD  E ++S + +  I
Sbjct: 421  MELKVAWDRYMDANDHWKDIEAQKQAKVEIKSGILKRIEEKENERDSFELQISNVSLSHI 480

Query: 1514 DEKEKNLCKEVDRKTRQFEEKEFESNIHQKEIEIFSLEQKIRTLSGERDVMASDSEDRLR 1693
            DE+EKNL  EV+RKT Q  E+EFESNI QK+ E++S+EQKI+ L+ E+D+MA DSEDR++
Sbjct: 481  DEREKNLRIEVERKTNQLAEREFESNIRQKQSELYSIEQKIKALNREKDIMAVDSEDRVK 540

Query: 1694 LGIRRAGVEDAQKKHRKIIDENKDRIRGVXXXXXXXXXXXXXXXXQVFRSLEKECDDLNS 1873
            L +++  +E+ +KKH+KI+DE KDRIRGV                Q  R+L  E DD+NS
Sbjct: 541  LSLKKGELENHKKKHQKIMDEYKDRIRGVLKGRLPPDKDLKKEITQALRALGIEFDDMNS 600

Query: 1874 KSVEANQEVKVFQMKIRDVKENLSKFQRDMDARKRSIDSKAQFLVLQC-SIESFPEVLQK 2050
            KS EA +EV + QMKI +V  NLSK  +DMD+RKR I+SK Q L  Q  SIES+ +    
Sbjct: 601  KSREAEKEVNMLQMKIEEVNNNLSKLNKDMDSRKRFIESKLQSLDQQSFSIESYMKAFDL 660

Query: 2051 VMEKRDLQKSKYNMADGMRKMFEPFERVARANHFCPCCERSFSPEEEDIFVKKQRKKAAD 2230
              EKRD+QKSKYN+ADGM++MF+PFERVARA+H CPCCER FS EEED FVKKQR KAA 
Sbjct: 661  AKEKRDVQKSKYNIADGMKQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAAS 720

Query: 2231 SAEHMKFLAVDVSNADSQFQQLDNLRMIYEEYLKLGRDTIPQXXXXXXXXXXXXXXXXQA 2410
            SAEHMK LAV+ S+A+S F QLD LRM+YEEY+K G++TIP                 QA
Sbjct: 721  SAEHMKVLAVESSSAESLFLQLDKLRMVYEEYVKXGKETIPLAEKNLNELTEELDQKSQA 780

Query: 2411 LDDVVGVLAHVKSEKDLVEALLQPVETADRLLSEIQTLQGEVSDLESRLDAQGHGVKSME 2590
            LDDV+GVLA VK++KD VEAL+QPVETADRL  EIQT Q +V DLE +LD +G GV+SME
Sbjct: 781  LDDVLGVLAQVKTDKDSVEALMQPVETADRLFQEIQTWQKQVDDLEYKLDFRGQGVRSME 840

Query: 2591 EIQSQLTMLQNLRDNLNNELRKLWEEQHHMKSDLSNAQMRWHLAREEKSRASNILDRVKK 2770
            EIQ +L  LQN +DNL+N+L KL +EQ +M++DLSN Q+RWH  REEK +A+N L  VKK
Sbjct: 841  EIQLELNTLQNTKDNLHNDLEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK 900

Query: 2771 AEEDINSLAEQKDQLDLDEKHLSEALVPLTKEKEKFLDDHNNLKLKFVRETDEQDELQRS 2950
            AEE+++ L E+K Q+DL EKHL+EAL PL+KEKEK L D+N+LK K   E ++Q E +R+
Sbjct: 901  AEEELDRLVEEKSQVDLHEKHLAEALGPLSKEKEKLLSDYNDLKAKLDFEYEQQAEQKRN 960

Query: 2951 CRQEVKNLLAKAFDIKEYSNXXXXXXXXXXXXXXXXSDSHLQNCENRRKEISAELTNSID 3130
             +QEV+ LL     IKEY +                S+S LQ+C+ R++EI  EL  S D
Sbjct: 961  YQQEVEALLKVTSKIKEYYDSKKGERLKELKEKQSLSESQLQSCDARKQEILTELNKSKD 1020

Query: 3131 LRSRQDQFKRNIDDNLNYRKTKAKVDELTHEIESLEDRILKIGGVSTFEADHKKHLQEKV 3310
            L   QDQ KRNI+DNLNYRKTKA+VD+LT EIE LEDRILKIGGVS  E D  K  QE+ 
Sbjct: 1021 LMRNQDQLKRNIEDNLNYRKTKAEVDKLTIEIELLEDRILKIGGVSAVEVDLGKLSQERE 1080

Query: 3311 RLRSELDRCHGTLSVYQAKVSKLKIDLKQAQYNDIDNRYFNQLIQLKTTEMANKDLDRYY 3490
            RL SEL+RCHGT SVYQ+ +SK KIDLKQ QY DID RY +QLIQLKTTEMANKDLDRYY
Sbjct: 1081 RLLSELNRCHGTTSVYQSNISKHKIDLKQTQYKDIDKRYCDQLIQLKTTEMANKDLDRYY 1140

Query: 3491 HALDKALMRFHSMKMEEINKIIRELWQQTYRGQDID 3598
            +ALDKALMRFH+MKMEEINKIIRELWQQTYRGQDID
Sbjct: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDID 1176


>ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cucumis sativus]
          Length = 1316

 Score = 1463 bits (3787), Expect = 0.0
 Identities = 742/1177 (63%), Positives = 922/1177 (78%), Gaps = 1/1177 (0%)
 Frame = +2

Query: 74   MSTVDKMLIKGIRSYSPDNKHVVTFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNAR 253
            MSTVDKMLIKGIRS+ P+N++V+TFFKPLTLIVG NGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 254  SGHSFVHDPKVKGDTETKGQIKLRFKTAAGKDVVCIRSFQLTQKATKMEFKAIESVLQTI 433
            SGHSF+HDPKV G+TETKGQIKLRFKTAAGKDVVCIRSFQLTQKA+KME+KAIESV QTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVFQTI 120

Query: 434  NPHSGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDDANWPLQDPSTLKKKFDDI 613
            NPH+GEKVCLSYRCADMDREIPALMGVSKA+LENVIFVHQD+ANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 614  FSATRYTKALEIIKKLHKDQAQEIKTYKLKLENLQVLKDAACKLRENIDEDQEETKTLKS 793
            FSATRYTKALE+IKKLHKDQA EIKTYKLKLENLQ LKDAA KLRE+I +DQE+T+++K 
Sbjct: 181  FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDAAYKLRESISQDQEKTESVKG 240

Query: 794  QIQELERNVQKVEAKIQQTETTLKDLQDLRDQISTKTTERRTLFQLQQTQYAAXXXXXXX 973
            Q+QELE+N+Q V+AKI   ET LKD++ L+DQISTKT ER TL++ QQ QYAA       
Sbjct: 241  QMQELEKNIQDVDAKIHHAETLLKDVRKLQDQISTKTAERSTLYKEQQKQYAALSEENED 300

Query: 974  XXXXXXXWQTTFEEKIARLESRISKVEREMKDIEIKSSSLRGAIIQYSRDIGKLQQEAEA 1153
                   W+T FEE+IA LES++SK+EREM D+E KSS L+ AI +Y  +I KLQ EAE 
Sbjct: 301  TDEELKEWKTKFEERIAILESKVSKLEREMNDLETKSSFLKQAINEYIWEISKLQTEAEV 360

Query: 1154 HMASRRDCDSTIEKLFAKHNLGHLPSTPFSNDVAFNLINRISTRMNELETDLKDKKKSNE 1333
            HM+ + + DSTIE+LFA+HNLG +P+TPFS++VA NL NRI  R+ +L+ D++DK+ SN+
Sbjct: 361  HMSLKNERDSTIEELFARHNLGSVPNTPFSDEVASNLTNRIKLRLVDLDKDMQDKRLSND 420

Query: 1334 VELSALWASYMKACERCSKLGGQKSAKADAKITILNSINDKEKERDDTEAELSGLDIVRI 1513
            VEL   W  YM A +R   +  QK AKAD K  I+  I +KE ERD  E ++S +D+  I
Sbjct: 421  VELKTAWDCYMDANDRWKNIDAQKHAKADIKRGIMKRIEEKESERDSFELQISHVDLSHI 480

Query: 1514 DEKEKNLCKEVDRKTRQFEEKEFESNIHQKEIEIFSLEQKIRTLSGERDVMASDSEDRLR 1693
            DE+EKN+  EV+RKT Q  E+EFES I QK+ +++ +EQKI+ ++ E+D+MA DSEDR++
Sbjct: 481  DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK 540

Query: 1694 LGIRRAGVEDAQKKHRKIIDENKDRIRGVXXXXXXXXXXXXXXXXQVFRSLEKECDDLNS 1873
            L +++A +++ +KKHRKIIDE KD+IRGV                Q  R++  E DDLNS
Sbjct: 541  LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEYDDLNS 600

Query: 1874 KSVEANQEVKVFQMKIRDVKENLSKFQRDMDARKRSIDSKAQFL-VLQCSIESFPEVLQK 2050
            KS EA ++V + QMKI++V  NLS++Q++M++RKR ++SK Q L  L  S++ + + L+ 
Sbjct: 601  KSREAEKDVNMLQMKIQEVNHNLSRYQKEMESRKRFVESKLQSLDPLSFSVDLYLKALEG 660

Query: 2051 VMEKRDLQKSKYNMADGMRKMFEPFERVARANHFCPCCERSFSPEEEDIFVKKQRKKAAD 2230
              EK+D+QKSKYN+ADGMR+MF+PFERVARA+H CPCCER F+ EEED FVKKQR KAA 
Sbjct: 661  AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS 720

Query: 2231 SAEHMKFLAVDVSNADSQFQQLDNLRMIYEEYLKLGRDTIPQXXXXXXXXXXXXXXXXQA 2410
            SAEHMK LAV+ S++DS FQQLD LRM++EEY+KL  +TIP                 QA
Sbjct: 721  SAEHMKVLAVESSSSDSHFQQLDKLRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQA 780

Query: 2411 LDDVVGVLAHVKSEKDLVEALLQPVETADRLLSEIQTLQGEVSDLESRLDAQGHGVKSME 2590
            LDDVVGVLA VK+++D VE L+QP++TADRL  EIQTLQ +V DL  +LD +G GVK++E
Sbjct: 781  LDDVVGVLAQVKADRDSVENLVQPIDTADRLYQEIQTLQKQVDDLVYKLDFRGKGVKTLE 840

Query: 2591 EIQSQLTMLQNLRDNLNNELRKLWEEQHHMKSDLSNAQMRWHLAREEKSRASNILDRVKK 2770
            EIQS+L  LQN +D L+NEL KL +EQ +M++DL+N Q+RWH  REEK +A+N L  V+K
Sbjct: 841  EIQSELNTLQNTKDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRDVRK 900

Query: 2771 AEEDINSLAEQKDQLDLDEKHLSEALVPLTKEKEKFLDDHNNLKLKFVRETDEQDELQRS 2950
            AEE+++ L E+K Q+DLDEKHL+EAL+PL+KEK+K L+D+N LK K  RE +E  + +R 
Sbjct: 901  AEEELDRLTEEKGQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNREYEELGDKKRK 960

Query: 2951 CRQEVKNLLAKAFDIKEYSNXXXXXXXXXXXXXXXXSDSHLQNCENRRKEISAELTNSID 3130
             +QEV+ LL     IKEY +                ++S LQ C++R++EI AEL  S D
Sbjct: 961  FQQEVETLLRTTSKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKD 1020

Query: 3131 LRSRQDQFKRNIDDNLNYRKTKAKVDELTHEIESLEDRILKIGGVSTFEADHKKHLQEKV 3310
            L   QDQ +RNI+DNLNYRKTKA+VDEL  +IESLE++ILKIGGVST EA+  K  QE+ 
Sbjct: 1021 LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTVEAEIGKLSQERE 1080

Query: 3311 RLRSELDRCHGTLSVYQAKVSKLKIDLKQAQYNDIDNRYFNQLIQLKTTEMANKDLDRYY 3490
            RL SEL+R HGT+SVYQ+ +SK KIDLK  QY DID RYF+QLIQLKTTEMANKDLDRYY
Sbjct: 1081 RLLSELNRFHGTMSVYQSNISKNKIDLKHVQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140

Query: 3491 HALDKALMRFHSMKMEEINKIIRELWQQTYRGQDIDY 3601
            +ALDKALMRFH+MKMEEINKIIRELWQQTYRGQDIDY
Sbjct: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDY 1177


>ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|222847406|gb|EEE84953.1|
            predicted protein [Populus trichocarpa]
          Length = 1316

 Score = 1429 bits (3698), Expect = 0.0
 Identities = 735/1177 (62%), Positives = 905/1177 (76%), Gaps = 1/1177 (0%)
 Frame = +2

Query: 74   MSTVDKMLIKGIRSYSPDNKHVVTFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNAR 253
            MSTVDKMLIKGIRS+ P+NKHV+TF +PLTLIVG NGAGKTTIIECLK++CTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENKHVITFLRPLTLIVGPNGAGKTTIIECLKVACTGELPPNAR 60

Query: 254  SGHSFVHDPKVKGDTETKGQIKLRFKTAAGKDVVCIRSFQLTQKATKMEFKAIESVLQTI 433
            SGHSF+HDPKV G+TETKGQIKLRFKTAA KDVVCIRSFQLTQKA+KME+KAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAAKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 434  NPHSGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDDANWPLQDPSTLKKKFDDI 613
            NPH+GEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQD+ANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 614  FSATRYTKALEIIKKLHKDQAQEIKTYKLKLENLQVLKDAACKLRENIDEDQEETKTLKS 793
            FSATRYTKALE+IKKLHKDQAQEIKTYKLKLENLQ LKDAA KLRE+I +DQE+T+ LK 
Sbjct: 181  FSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIGQDQEKTEILKV 240

Query: 794  QIQELERNVQKVEAKIQQTETTLKDLQDLRDQISTKTTERRTLFQLQQTQYAAXXXXXXX 973
            Q QELE N+Q ++AKI  TE TLKD++ L+DQI+ KT ER TLF+ QQ QYAA       
Sbjct: 241  QSQELESNLQNLDAKIHHTEVTLKDMRKLQDQITIKTAERSTLFREQQRQYAALAEENED 300

Query: 974  XXXXXXXWQTTFEEKIARLESRISKVEREMKDIEIKSSSLRGAIIQYSRDIGKLQQEAEA 1153
                   W+T F+EKIA LES I K+EREM D+E K S L+  I +Y R+I +LQ EAEA
Sbjct: 301  TDEELQEWKTKFDEKIASLESNICKLEREMNDMETKGSFLKQNINEYIREISRLQTEAEA 360

Query: 1154 HMASRRDCDSTIEKLFAKHNLGHLPSTPFSNDVAFNLINRISTRMNELETDLKDKKKSNE 1333
            H + + + DS I+K++ +HNLG LP+ PFS+DVA NL NR+ +R+ +L+ DL+DKK SN+
Sbjct: 361  HASLKNERDSNIQKMYTRHNLGPLPNAPFSDDVALNLTNRLKSRLVDLDKDLQDKKTSND 420

Query: 1334 VELSALWASYMKACERCSKLGGQKSAKADAKITILNSINDKEKERDDTEAELSGLDIVRI 1513
             E+      Y  A ER      QK AK + K +ILN I +KE+E    E ++S +++  I
Sbjct: 421  TEVKRAENCYWDANERWKNTEAQKQAKVEIKNSILNRITEKEREHSSFEEQISHVNLSHI 480

Query: 1514 DEKEKNLCKEVDRKTRQFEEKEFESNIHQKEIEIFSLEQKIRTLSGERDVMASDSEDRLR 1693
            DEKEKN+  EV+RKT Q  E+EFES+I QK+ E++ +EQ+I+ L+ E+D++A DSEDR++
Sbjct: 481  DEKEKNMRIEVERKTNQLAEREFESHIRQKQSELYGIEQQIKVLNREKDILAGDSEDRVK 540

Query: 1694 LGIRRAGVEDAQKKHRKIIDENKDRIRGVXXXXXXXXXXXXXXXXQVFRSLEKECDDLNS 1873
            L +++  +E+ +KKHRKIIDE KD+IRGV                Q  R+L  E DDLN 
Sbjct: 541  LSLKKVELENHKKKHRKIIDECKDKIRGVLKGRLPPDKDLKKEITQTLRALGLEFDDLNM 600

Query: 1874 KSVEANQEVKVFQMKIRDVKENLSKFQRDMDARKRSIDSKAQFL-VLQCSIESFPEVLQK 2050
            KS EA +EV V QMKI++V  NLSK ++DMD+RKR I+SK Q L  L  S++ + + L+ 
Sbjct: 601  KSREAEKEVNVLQMKIQEVNNNLSKQRKDMDSRKRFIESKLQSLDQLSFSVDLYLKALES 660

Query: 2051 VMEKRDLQKSKYNMADGMRKMFEPFERVARANHFCPCCERSFSPEEEDIFVKKQRKKAAD 2230
              EKRD+QKSKYN+ADGMR+MF+PFERVARA+H CPCCER FS EEED FVKKQR KAA 
Sbjct: 661  SKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAAS 720

Query: 2231 SAEHMKFLAVDVSNADSQFQQLDNLRMIYEEYLKLGRDTIPQXXXXXXXXXXXXXXXXQA 2410
            SAEHMK L+++ SNAD+ FQQLD LRM+YEEY K+G++TIP                 QA
Sbjct: 721  SAEHMKVLSMESSNADTLFQQLDKLRMVYEEYTKIGKETIPLAEKNLSELTEELEQKSQA 780

Query: 2411 LDDVVGVLAHVKSEKDLVEALLQPVETADRLLSEIQTLQGEVSDLESRLDAQGHGVKSME 2590
            LDDV+GVLA  K+EKD VEAL+QPVETADRL  EIQT Q +V DLE +LD +G GV++ME
Sbjct: 781  LDDVLGVLAQTKAEKDSVEALVQPVETADRLFQEIQTWQKQVDDLEYKLDFRGQGVRTME 840

Query: 2591 EIQSQLTMLQNLRDNLNNELRKLWEEQHHMKSDLSNAQMRWHLAREEKSRASNILDRVKK 2770
            E+QS+L+ LQ  +DNL+NE+ KL +EQ +M++DLS+ Q+RWH  REEK  A+NIL  VKK
Sbjct: 841  EVQSELSSLQGTKDNLHNEVEKLRDEQRYMENDLSHIQIRWHALREEKVTAANILRDVKK 900

Query: 2771 AEEDINSLAEQKDQLDLDEKHLSEALVPLTKEKEKFLDDHNNLKLKFVRETDEQDELQRS 2950
            +EE++  L E+K Q++L+EKHL+EA+ PL++EKEK   +HN LK++  RE +EQ +   +
Sbjct: 901  SEEELERLVEEKHQVELEEKHLAEAVGPLSREKEKLQGEHNELKVQLEREYEEQKKQLDN 960

Query: 2951 CRQEVKNLLAKAFDIKEYSNXXXXXXXXXXXXXXXXSDSHLQNCENRRKEISAELTNSID 3130
             +QEV  L+  A  I+EY N                S+S LQ C+ R++EI AEL +S +
Sbjct: 961  FKQEVDTLVRIASKIREYYNLKKGERLKEMQEKLSLSESQLQGCDARKQEILAELNDSKN 1020

Query: 3131 LRSRQDQFKRNIDDNLNYRKTKAKVDELTHEIESLEDRILKIGGVSTFEADHKKHLQEKV 3310
                QD  +R+I+DNLNYRK KA+V+ELT EIESLE+RILKIGG S+FEA+  K LQE+ 
Sbjct: 1021 AVRSQDNLRRSIEDNLNYRKIKAEVEELTREIESLEERILKIGGFSSFEAELAKLLQERE 1080

Query: 3311 RLRSELDRCHGTLSVYQAKVSKLKIDLKQAQYNDIDNRYFNQLIQLKTTEMANKDLDRYY 3490
            RL SEL+R  GT+SVYQ  +SK KIDLKQ QY DID RYF+QLIQLKTTEMANKDLDRYY
Sbjct: 1081 RLLSELNRFRGTMSVYQNNISKNKIDLKQVQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140

Query: 3491 HALDKALMRFHSMKMEEINKIIRELWQQTYRGQDIDY 3601
            +ALDKALMRFH+MKMEEINKIIRELWQQTYRGQDIDY
Sbjct: 1141 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDY 1177


>ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Glycine max]
          Length = 1316

 Score = 1386 bits (3588), Expect = 0.0
 Identities = 710/1177 (60%), Positives = 891/1177 (75%), Gaps = 1/1177 (0%)
 Frame = +2

Query: 74   MSTVDKMLIKGIRSYSPDNKHVVTFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNAR 253
            MSTVDKMLIKGIRS+ P+NK+V+TFFKPLTLIVG NGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 254  SGHSFVHDPKVKGDTETKGQIKLRFKTAAGKDVVCIRSFQLTQKATKMEFKAIESVLQTI 433
            SGHSF+HDPKV G+TETKGQIKLRFKTAAGKDVVC+RSFQLTQKA+KME+KAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCVRSFQLTQKASKMEYKAIESVLQTI 120

Query: 434  NPHSGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDDANWPLQDPSTLKKKFDDI 613
            NPH+GEKVCLSYRCADMD+EIPALMGVSKAILENVIFVHQD+ANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDKEIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 614  FSATRYTKALEIIKKLHKDQAQEIKTYKLKLENLQVLKDAACKLRENIDEDQEETKTLKS 793
            FSATRYTKALE+IKKLHK+QAQEIKTYKLKLENLQ LKDAA KLRE+I +DQE+T++ + 
Sbjct: 181  FSATRYTKALEVIKKLHKEQAQEIKTYKLKLENLQTLKDAAYKLRESIAQDQEKTESAEC 240

Query: 794  QIQELERNVQKVEAKIQQTETTLKDLQDLRDQISTKTTERRTLFQLQQTQYAAXXXXXXX 973
            Q+Q+L+ ++Q+++ KI  TE TLK L+ L++QISTKT +R  LF+ QQ QY A       
Sbjct: 241  QLQQLDGSIQELDHKIHHTEETLKYLRKLQEQISTKTAQRSILFKEQQKQYLALTEEIED 300

Query: 974  XXXXXXXWQTTFEEKIARLESRISKVEREMKDIEIKSSSLRGAIIQYSRDIGKLQQEAEA 1153
                   W+T FEE+IA LE++IS++ERE +DI+  SS+L+  I +    I KLQ EAEA
Sbjct: 301  TDEELMEWKTKFEERIASLETKISRLERETEDIDCTSSTLKETIAESIEVIAKLQAEAEA 360

Query: 1154 HMASRRDCDSTIEKLFAKHNLGHLPSTPFSNDVAFNLINRISTRMNELETDLKDKKKSNE 1333
            HM+ + + DS+I  LF  +NLG LP +PFS +VA NL NR+ +R+ +LE DL DKKK+N+
Sbjct: 361  HMSFKNERDSSIHNLFTTYNLGSLPKSPFSAEVALNLTNRVKSRLEDLEKDLDDKKKAND 420

Query: 1334 VELSALWASYMKACERCSKLGGQKSAKADAKITILNSINDKEKERDDTEAELSGLDIVRI 1513
             E+   +  YM A +R      +  A   +K  I   I +K+ E D  E ++S  +  ++
Sbjct: 421  NEIKMAFDCYMNANDRLKHTEAKIKAMTGSKSGISKRIEEKKNELDSLELQISDENFSQL 480

Query: 1514 DEKEKNLCKEVDRKTRQFEEKEFESNIHQKEIEIFSLEQKIRTLSGERDVMASDSEDRLR 1693
            DE+E+NL  EV RK  Q +E++FE N  + E EI+S++QKI+ +S E+D+M SDS+DR++
Sbjct: 481  DERERNLENEVKRKASQLDERQFEPNKCEVEKEIYSVDQKIKAVSREKDIMVSDSQDRVK 540

Query: 1694 LGIRRAGVEDAQKKHRKIIDENKDRIRGVXXXXXXXXXXXXXXXXQVFRSLEKECDDLNS 1873
            L  ++  +E  +KKH+KIIDE KD+IR V                Q  R++  E DDLN+
Sbjct: 541  LSYKKGELESQKKKHKKIIDEQKDKIRKVLKGRVPLDKDVKKEIMQALRAVGAEFDDLNA 600

Query: 1874 KSVEANQEVKVFQMKIRDVKENLSKFQRDMDARKRSIDSKAQFLVLQCS-IESFPEVLQK 2050
            K  EA +EV V Q+KI++V  NLSK  +D+++RKR I+SK Q L  QCS I+S+ +VL+ 
Sbjct: 601  KYREAEKEVNVLQVKIQEVNSNLSKHHKDLESRKRYIESKLQSLDQQCSGIDSYLKVLES 660

Query: 2051 VMEKRDLQKSKYNMADGMRKMFEPFERVARANHFCPCCERSFSPEEEDIFVKKQRKKAAD 2230
              EKRD+Q+SKYN+ADGMR+MF+PFERVARANH CPCCER FSPEEED FVKKQR KA  
Sbjct: 661  AKEKRDVQRSKYNIADGMRQMFDPFERVARANHVCPCCERPFSPEEEDSFVKKQRVKATS 720

Query: 2231 SAEHMKFLAVDVSNADSQFQQLDNLRMIYEEYLKLGRDTIPQXXXXXXXXXXXXXXXXQA 2410
            SA HMK LAV+ SNA+S FQQLD LRM+YEEY+KLG++TIP                 QA
Sbjct: 721  SAGHMKVLAVESSNAESHFQQLDKLRMLYEEYVKLGKETIPNSEKELQQLKEEMDDKSQA 780

Query: 2411 LDDVVGVLAHVKSEKDLVEALLQPVETADRLLSEIQTLQGEVSDLESRLDAQGHGVKSME 2590
            LDDV+GVLA VKS+KDLVE L+QPVE ADR+  EIQ LQ +V DLE + + +  GV+++E
Sbjct: 781  LDDVLGVLAQVKSDKDLVETLVQPVENADRIFQEIQALQKQVEDLEDKHNFRAQGVRTLE 840

Query: 2591 EIQSQLTMLQNLRDNLNNELRKLWEEQHHMKSDLSNAQMRWHLAREEKSRASNILDRVKK 2770
            EIQ +L  LQ+ ++NL +EL +L +EQ +M+ DLS+ QMRWH  REEK++A+NIL  VK+
Sbjct: 841  EIQLELNTLQSTKENLQSELDRLKDEQRYMEKDLSSIQMRWHTVREEKTKATNILQGVKR 900

Query: 2771 AEEDINSLAEQKDQLDLDEKHLSEALVPLTKEKEKFLDDHNNLKLKFVRETDEQDELQRS 2950
             EE++  L E+K Q+DLDEKHL++AL PL+KE +K L +HN LK++  RE ++  E +RS
Sbjct: 901  LEEELERLTEEKTQVDLDEKHLADALGPLSKETDKLLANHNELKIRLEREYEDLAEQKRS 960

Query: 2951 CRQEVKNLLAKAFDIKEYSNXXXXXXXXXXXXXXXXSDSHLQNCENRRKEISAELTNSID 3130
             +QE + L      IK YS+                S+S LQ+ + R++EI AEL  S D
Sbjct: 961  YQQEAQALFKMNSKIKTYSDLKKGDRLKELQEKKSSSESQLQSFDTRKQEILAELNKSKD 1020

Query: 3131 LRSRQDQFKRNIDDNLNYRKTKAKVDELTHEIESLEDRILKIGGVSTFEADHKKHLQEKV 3310
            L   QDQ KRNI+DNLNYRKTKA+VDEL HEIE++E+ ILK G +ST E + +K  QE+ 
Sbjct: 1021 LMRGQDQLKRNIEDNLNYRKTKAEVDELAHEIETMEENILKAGRISTVETELQKLSQERE 1080

Query: 3311 RLRSELDRCHGTLSVYQAKVSKLKIDLKQAQYNDIDNRYFNQLIQLKTTEMANKDLDRYY 3490
            RL SEL+RC GT+SVYQ+ +SK K+DLKQAQY DID RYF+QLIQLKTTEMANKDLDRYY
Sbjct: 1081 RLLSELNRCRGTMSVYQSNISKNKVDLKQAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1140

Query: 3491 HALDKALMRFHSMKMEEINKIIRELWQQTYRGQDIDY 3601
             ALDKALMRFH+MKMEEINKIIRELWQQTYRGQDIDY
Sbjct: 1141 SALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDY 1177


>ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus communis]
            gi|223538045|gb|EEF39658.1| DNA repair protein RAD50,
            putative [Ricinus communis]
          Length = 1256

 Score = 1384 bits (3581), Expect = 0.0
 Identities = 717/1177 (60%), Positives = 888/1177 (75%), Gaps = 1/1177 (0%)
 Frame = +2

Query: 74   MSTVDKMLIKGIRSYSPDNKHVVTFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNAR 253
            MSTVDKMLIKGIRS+ P+NKHV+TFFKPLTLIVG NGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1    MSTVDKMLIKGIRSFDPENKHVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 254  SGHSFVHDPKVKGDTETKGQIKLRFKTAAGKDVVCIRSFQLTQKATKMEFKAIESVLQTI 433
            SGHSF+HDPKV G+TETKGQIKLRFKTAAGKDVVCIRSFQLTQKA+KME+KAIESVLQTI
Sbjct: 61   SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 434  NPHSGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDDANWPLQDPSTLKKKFDDI 613
            NPH+GEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQD+ANWPLQDPSTLKKKFDDI
Sbjct: 121  NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 614  FSATRYTKALEIIKKLHKDQAQEIKTYKLKLENLQVLKDAACKLRENIDEDQEETKTLKS 793
            FSATRYTKALE+IKKLHKDQAQEIKTYKLKLENLQ LKD+A KLRE+I +D+E T++ K 
Sbjct: 181  FSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDSAYKLRESITQDEERTESSKV 240

Query: 794  QIQELERNVQKVEAKIQQTETTLKDLQDLRDQISTKTTERRTLFQLQQTQYAAXXXXXXX 973
            QIQ LE  VQ V+ KI Q +TTLKDL++L+++I TKT ERRTLF+ QQ QY A       
Sbjct: 241  QIQALENKVQNVDVKIHQIQTTLKDLRNLQEKIMTKTVERRTLFKEQQRQYEALEEENED 300

Query: 974  XXXXXXXWQTTFEEKIARLESRISKVEREMKDIEIKSSSLRGAIIQYSRDIGKLQQEAEA 1153
                   W+T F+EK+A++ES ISK++RE  D EIK+S L+  I +Y R+I +LQ EAEA
Sbjct: 301  PDEDLMEWKTKFDEKVAQMESSISKLKREKNDTEIKTSFLKENITEYIREISRLQTEAEA 360

Query: 1154 HMASRRDCDSTIEKLFAKHNLGHLPSTPFSNDVAFNLINRISTRMNELETDLKDKKKSNE 1333
            H + + + DSTI+KL A+HNLG LP  P S+D+A NL NR+ +R+ +L  DL+DKK SN+
Sbjct: 361  HNSLKNERDSTIQKLCARHNLGSLPQAPLSDDIALNLTNRLKSRLTDLRKDLQDKKTSND 420

Query: 1334 VELSALWASYMKACERCSKLGGQKSAKADAKITILNSINDKEKERDDTEAELSGLDIVRI 1513
             E+      Y+   +R   +  QK AK + K  IL+ I  KE +R   E E+S +++  I
Sbjct: 421  TEVKTAEDCYLDVNDRWKHIDAQKQAKREIKNGILDRITKKEHDRASFEEEISHVNLSHI 480

Query: 1514 DEKEKNLCKEVDRKTRQFEEKEFESNIHQKEIEIFSLEQKIRTLSGERDVMASDSEDRLR 1693
            DE+EKN+  EV+RKT Q  E+ FESNI QK+ E++ +EQ+I+ L GE+D++A  SEDR++
Sbjct: 481  DEREKNMRIEVERKTNQLAERAFESNIRQKQTELYGIEQEIKALDGEKDILAIYSEDRVK 540

Query: 1694 LGIRRAGVEDAQKKHRKIIDENKDRIRGVXXXXXXXXXXXXXXXXQVFRSLEKECDDLNS 1873
            L +++A +E+ +KKH+KIIDE+KDRIRGV                Q  R+L  E DDLNS
Sbjct: 541  LSLKKADLENHKKKHKKIIDEHKDRIRGVLKGRVPSDKDMKKEITQALRALAVEFDDLNS 600

Query: 1874 KSVEANQEVKVFQMKIRDVKENLSKFQRDMDARKRSIDSKAQFLVLQ-CSIESFPEVLQK 2050
            KS EA +EV V QMKI++V  NLSK ++DMD+RKR I+SK   L  Q  +++ + +VL  
Sbjct: 601  KSHEAEKEVNVLQMKIQEVNNNLSKLRKDMDSRKRFIESKLHSLDQQSLTVDCYLKVLGS 660

Query: 2051 VMEKRDLQKSKYNMADGMRKMFEPFERVARANHFCPCCERSFSPEEEDIFVKKQRKKAAD 2230
              +KRD+QKSKYN+ADGMR+MF+PFERVARA+H CPCCER FS EEED FVKKQR KAA 
Sbjct: 661  AKDKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAAS 720

Query: 2231 SAEHMKFLAVDVSNADSQFQQLDNLRMIYEEYLKLGRDTIPQXXXXXXXXXXXXXXXXQA 2410
            SAEHMK LA + SNADS FQQLD LRM+YEE++K+ ++TIP                 QA
Sbjct: 721  SAEHMKVLAAESSNADSNFQQLDKLRMLYEEFVKIEKETIPLAEKNLHDLTEELDQKSQA 780

Query: 2411 LDDVVGVLAHVKSEKDLVEALLQPVETADRLLSEIQTLQGEVSDLESRLDAQGHGVKSME 2590
            LDDV+GVLA +K++KD VEAL+QPVETADRL  EIQT Q +V DLE +LD Q  G +SME
Sbjct: 781  LDDVLGVLAQIKADKDSVEALVQPVETADRLYQEIQTWQKQVDDLEYKLDIQRQGGRSME 840

Query: 2591 EIQSQLTMLQNLRDNLNNELRKLWEEQHHMKSDLSNAQMRWHLAREEKSRASNILDRVKK 2770
            EI S+L+ LQ+ ++ L+NEL KL +E+ +M++DLS+                N L  VKK
Sbjct: 841  EIHSELSSLQDTKEALHNELEKLRDERRYMENDLSHI-------------XXNTLLNVKK 887

Query: 2771 AEEDINSLAEQKDQLDLDEKHLSEALVPLTKEKEKFLDDHNNLKLKFVRETDEQDELQRS 2950
            AEE++  L E+K+Q++LDEKHL+EALVPL+KE+EK    ++ LK+K  +E +EQ +   S
Sbjct: 888  AEEELEHLIEEKNQVELDEKHLAEALVPLSKEREKLRSYNSELKVKLEQELEEQKKELDS 947

Query: 2951 CRQEVKNLLAKAFDIKEYSNXXXXXXXXXXXXXXXXSDSHLQNCENRRKEISAELTNSID 3130
             + +V  LL     IKEY++                 +S LQ+C++R+KEI  EL    +
Sbjct: 948  YQWDVDTLLKINSKIKEYNDLKKRERLKEMQEKLSLLESQLQSCDDRKKEILDELNKCEN 1007

Query: 3131 LRSRQDQFKRNIDDNLNYRKTKAKVDELTHEIESLEDRILKIGGVSTFEADHKKHLQEKV 3310
                Q+   R I DNLNYRKTKA+VD+LT EIESLE+ +LKIGGVSTFE +  +HLQE+ 
Sbjct: 1008 ANQNQESLYRKIQDNLNYRKTKAEVDKLTQEIESLEEEMLKIGGVSTFEGELARHLQERE 1067

Query: 3311 RLRSELDRCHGTLSVYQAKVSKLKIDLKQAQYNDIDNRYFNQLIQLKTTEMANKDLDRYY 3490
             L SEL++C GT+SVYQ+ +SK K+DLKQAQY DID RYF+QLIQLKTTEMANKDLDRYY
Sbjct: 1068 SLLSELNKCRGTMSVYQSNISKNKVDLKQAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY 1127

Query: 3491 HALDKALMRFHSMKMEEINKIIRELWQQTYRGQDIDY 3601
            +ALDKALMRFH+MKMEEINKIIRELWQQTYRGQDIDY
Sbjct: 1128 NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDY 1164