BLASTX nr result

ID: Coptis25_contig00005860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005860
         (1285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534094.1| Beta-expansin 1a precursor, putative [Ricinu...   321   3e-85
gb|AFK41484.1| unknown [Medicago truncatula]                          320   7e-85
gb|ACJ84296.1| unknown [Medicago truncatula]                          320   7e-85
ref|XP_003540432.1| PREDICTED: expansin-like A1-like [Glycine max]    318   2e-84
gb|AFK37951.1| unknown [Lotus japonicus] gi|388506008|gb|AFK4107...   317   6e-84

>ref|XP_002534094.1| Beta-expansin 1a precursor, putative [Ricinus communis]
           gi|223525857|gb|EEF28288.1| Beta-expansin 1a precursor,
           putative [Ricinus communis]
          Length = 259

 Score =  321 bits (822), Expect = 3e-85
 Identities = 156/261 (59%), Positives = 188/261 (72%)
 Frame = -1

Query: 967 DRCVHQTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPSLFREGVGCGACFQIRCK 788
           DRC HQ+K                               GVP+LF+ G GCGACFQIRC+
Sbjct: 19  DRCPHQSKAAYFSKASQLSSGACGYGSSAIGFNSGHLAAGVPTLFKGGAGCGACFQIRCR 78

Query: 787 NKNICSSGGTKVMVTDLNKSNGTDFVLTNKAFMSMAQKGMGQNMLKLGVVDVEYKRIPCD 608
           NK +CSS GT V++TDLN +N TDFVL+++AFM+MA KGMGQ++L+LG+VD+EYKR+PC 
Sbjct: 79  NKTMCSSKGTTVILTDLNHNNQTDFVLSSRAFMAMANKGMGQDILRLGIVDIEYKRVPCV 138

Query: 607 YKNKNLSVRVEESSQTPHYLAIKFLYQGGQTDIVGVDVAQVXXXXXXXXXXXXXXXXXXQ 428
           YKN+NL+VRVEESSQ P+YLAIK LYQGGQT+IV +DVA                    Q
Sbjct: 139 YKNQNLAVRVEESSQKPNYLAIKVLYQGGQTEIVAMDVA--------------------Q 178

Query: 427 VGSSSWSYLSRNHGAVWDTSRVPQGPLQFRLVVTGGFDGKWVWAPKVLPANWKAGVIYDT 248
           VGSS+WSY+SRN+GAVWDTSRVP G LQFR VVT G+DGKW+WA  VLPA+WK GV+YD+
Sbjct: 179 VGSSNWSYMSRNYGAVWDTSRVPGGALQFRFVVTAGYDGKWIWAKSVLPADWKPGVVYDS 238

Query: 247 GVQITDIAQEGCSPCDDGHWK 185
           GVQI+DIAQEGCSPCDD  WK
Sbjct: 239 GVQISDIAQEGCSPCDDEIWK 259


>gb|AFK41484.1| unknown [Medicago truncatula]
          Length = 260

 Score =  320 bits (819), Expect = 7e-85
 Identities = 156/260 (60%), Positives = 187/260 (71%)
 Frame = -1

Query: 967 DRCVHQTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPSLFREGVGCGACFQIRCK 788
           DRC+HQ+K                               GV SLF  G GCGACFQ+RCK
Sbjct: 20  DRCLHQSKASYFSKASALSSGACGYGSLALDFSGGHLAAGVSSLFYNGAGCGACFQVRCK 79

Query: 787 NKNICSSGGTKVMVTDLNKSNGTDFVLTNKAFMSMAQKGMGQNMLKLGVVDVEYKRIPCD 608
           N+ IC+  GTKV++TDLN +N TDFVL+++AF +MAQKGM Q +LKLG+VD+EYKR+PC+
Sbjct: 80  NQAICTKEGTKVVLTDLNHNNQTDFVLSSRAFTAMAQKGMSQQILKLGIVDIEYKRVPCE 139

Query: 607 YKNKNLSVRVEESSQTPHYLAIKFLYQGGQTDIVGVDVAQVXXXXXXXXXXXXXXXXXXQ 428
           YK +NL+VRVEESS+ P YLAIKFLYQGGQT+IVGVDVA                    Q
Sbjct: 140 YKKQNLAVRVEESSKKPDYLAIKFLYQGGQTEIVGVDVA--------------------Q 179

Query: 427 VGSSSWSYLSRNHGAVWDTSRVPQGPLQFRLVVTGGFDGKWVWAPKVLPANWKAGVIYDT 248
           VGSS+WS+LSRNHGAVWDTSRVPQG LQFR+VVT G+DGKW+WA KVLPA+WK GVIYD+
Sbjct: 180 VGSSNWSFLSRNHGAVWDTSRVPQGALQFRIVVTSGYDGKWLWAKKVLPADWKNGVIYDS 239

Query: 247 GVQITDIAQEGCSPCDDGHW 188
            +QIT+IAQEGCSPC+D  W
Sbjct: 240 DIQITEIAQEGCSPCNDETW 259


>gb|ACJ84296.1| unknown [Medicago truncatula]
          Length = 260

 Score =  320 bits (819), Expect = 7e-85
 Identities = 156/260 (60%), Positives = 187/260 (71%)
 Frame = -1

Query: 967 DRCVHQTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPSLFREGVGCGACFQIRCK 788
           DRC+HQ+K                               GV SLF  G GCGACFQ+RCK
Sbjct: 20  DRCLHQSKASYFSKASALSSGACGYGSLALDFSGGHLAAGVSSLFYNGAGCGACFQVRCK 79

Query: 787 NKNICSSGGTKVMVTDLNKSNGTDFVLTNKAFMSMAQKGMGQNMLKLGVVDVEYKRIPCD 608
           N+ IC+  GTKV++TDLN +N TDFVL+++AF +MAQKGM Q +LKLG+VD+EYKR+PC+
Sbjct: 80  NQAICTKEGTKVVLTDLNHNNQTDFVLSSRAFTAMAQKGMSQQILKLGIVDIEYKRVPCE 139

Query: 607 YKNKNLSVRVEESSQTPHYLAIKFLYQGGQTDIVGVDVAQVXXXXXXXXXXXXXXXXXXQ 428
           YK +NL+VRVEESS+ P YLAIKFLYQGGQT+IVGVDVA                    Q
Sbjct: 140 YKKQNLAVRVEESSKKPDYLAIKFLYQGGQTEIVGVDVA--------------------Q 179

Query: 427 VGSSSWSYLSRNHGAVWDTSRVPQGPLQFRLVVTGGFDGKWVWAPKVLPANWKAGVIYDT 248
           VGSS+WS+LSRNHGAVWDTSRVPQG LQFR+VVT G+DGKW+WA KVLPA+WK GVIYD+
Sbjct: 180 VGSSNWSFLSRNHGAVWDTSRVPQGALQFRIVVTSGYDGKWLWAKKVLPADWKNGVIYDS 239

Query: 247 GVQITDIAQEGCSPCDDGHW 188
            +QIT+IAQEGCSPC+D  W
Sbjct: 240 DIQITEIAQEGCSPCNDETW 259


>ref|XP_003540432.1| PREDICTED: expansin-like A1-like [Glycine max]
          Length = 261

 Score =  318 bits (814), Expect = 2e-84
 Identities = 154/260 (59%), Positives = 186/260 (71%)
 Frame = -1

Query: 967 DRCVHQTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPSLFREGVGCGACFQIRCK 788
           DRC+HQ+K                               GV SLF++G  CGACFQIRCK
Sbjct: 21  DRCLHQSKASYFSKASALSSGACGYGSLALDISGGHLAAGVASLFKDGAVCGACFQIRCK 80

Query: 787 NKNICSSGGTKVMVTDLNKSNGTDFVLTNKAFMSMAQKGMGQNMLKLGVVDVEYKRIPCD 608
           N  +CS  GT+V++TDLN +N TDFVL+++AF  MAQKGMG+ +LKLG+ D+EYKR+PC+
Sbjct: 81  NPTLCSKEGTRVVLTDLNHNNQTDFVLSSRAFAGMAQKGMGKQILKLGIADIEYKRVPCE 140

Query: 607 YKNKNLSVRVEESSQTPHYLAIKFLYQGGQTDIVGVDVAQVXXXXXXXXXXXXXXXXXXQ 428
           YK +NL+VRVEESS+ P YLAIKFLYQGGQT+IV VDVA                    Q
Sbjct: 141 YKKQNLAVRVEESSKKPEYLAIKFLYQGGQTEIVAVDVA--------------------Q 180

Query: 427 VGSSSWSYLSRNHGAVWDTSRVPQGPLQFRLVVTGGFDGKWVWAPKVLPANWKAGVIYDT 248
           VGSS+WS++SR+ GAVWDTSRVPQG LQFRLVVT G+DGKW+WA KVLPA+WK G+IYD+
Sbjct: 181 VGSSNWSFMSRSDGAVWDTSRVPQGALQFRLVVTAGYDGKWIWAKKVLPADWKNGLIYDS 240

Query: 247 GVQITDIAQEGCSPCDDGHW 188
           G+QITDIAQEGCSPCDDG W
Sbjct: 241 GLQITDIAQEGCSPCDDGTW 260


>gb|AFK37951.1| unknown [Lotus japonicus] gi|388506008|gb|AFK41070.1| unknown
           [Lotus japonicus]
          Length = 260

 Score =  317 bits (811), Expect = 6e-84
 Identities = 152/260 (58%), Positives = 185/260 (71%)
 Frame = -1

Query: 967 DRCVHQTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPSLFREGVGCGACFQIRCK 788
           DRC HQ+K                               GVPSLF+ G GCGAC+Q+RCK
Sbjct: 21  DRCSHQSKAAYFSKASALSSGACGYDSLALGLSGGHLAAGVPSLFKSGAGCGACYQLRCK 80

Query: 787 NKNICSSGGTKVMVTDLNKSNGTDFVLTNKAFMSMAQKGMGQNMLKLGVVDVEYKRIPCD 608
           N  +C   G +V++TDLN +N T+FVL+++AF++MAQ G GQ +LKLG+VD+EYKR+ C+
Sbjct: 81  NPTLCKKEGARVVLTDLNPNNQTEFVLSSRAFVAMAQDGKGQQILKLGIVDIEYKRVACE 140

Query: 607 YKNKNLSVRVEESSQTPHYLAIKFLYQGGQTDIVGVDVAQVXXXXXXXXXXXXXXXXXXQ 428
           +KN+NL+VRVEESS+ P YLAIKFLYQGGQT+IVGVDVA                    Q
Sbjct: 141 FKNQNLAVRVEESSKKPDYLAIKFLYQGGQTEIVGVDVA--------------------Q 180

Query: 427 VGSSSWSYLSRNHGAVWDTSRVPQGPLQFRLVVTGGFDGKWVWAPKVLPANWKAGVIYDT 248
           VGSS+W ++SRNHGAVWDTSRVPQGPLQFRLVVT G+DGKWVWA KVLP +WK GVIYD+
Sbjct: 181 VGSSNWRFMSRNHGAVWDTSRVPQGPLQFRLVVTAGYDGKWVWAQKVLPLDWKNGVIYDS 240

Query: 247 GVQITDIAQEGCSPCDDGHW 188
           GV+IT+IAQEGC PCDDG W
Sbjct: 241 GVKITEIAQEGCFPCDDGTW 260


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