BLASTX nr result

ID: Coptis25_contig00005837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005837
         (1249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152892.1| PREDICTED: superkiller viralicidic activity ...   342   9e-92
ref|XP_002266524.2| PREDICTED: superkiller viralicidic activity ...   338   1e-90
emb|CBI24057.3| unnamed protein product [Vitis vinifera]              338   1e-90
ref|XP_002308126.1| predicted protein [Populus trichocarpa] gi|2...   337   5e-90
ref|XP_002883745.1| HUA enhancer 2 [Arabidopsis lyrata subsp. ly...   335   2e-89

>ref|XP_004152892.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Cucumis
            sativus]
          Length = 1014

 Score =  342 bits (878), Expect = 9e-92
 Identities = 200/349 (57%), Positives = 238/349 (68%), Gaps = 1/349 (0%)
 Frame = +2

Query: 2    VPVQLPLICALSNCRVSVPSDLRPVEAWQSILLAVQ*LVSGFPNGFQSLIQ*RIWALRIQ 181
            VPVQLPLI ALS  R+S+PSDLRPVEA +SILLA++ L + FP GF  L   +   +   
Sbjct: 701  VPVQLPLISALSKLRISIPSDLRPVEARESILLALEELGTRFPQGFPKLNPVKDMNIEDP 760

Query: 182  SLLSWLIKLRNLRRNCLLIHYIRPL-KTRK*YGTDQMFPKKSRGES*NSTAQIKDA*FSX 358
             ++  + ++  L R      Y  PL K+R+    DQM   + + E  +    +K+     
Sbjct: 761  EIVELVKQIEELERKL----YAHPLHKSRE---VDQMKCFQRKAEVNHEIQILKNK---- 809

Query: 359  XXXXXXXXXXXXXXXXLQKFRDELKNRSRVLKKLGHIDADGIVQLKGRAACLIDTGDELL 538
                            LQKFRDELKNRSRVLKKLGH+DADG+VQLKGRAACLIDTGDELL
Sbjct: 810  -----------MRDSQLQKFRDELKNRSRVLKKLGHVDADGVVQLKGRAACLIDTGDELL 858

Query: 539  VMELMFNGMFNDLDPDQVVALASCFIPGDRSNEQIHLRA*IAKPLQQLQDCARRIAEIQ* 718
            V ELMFNG FNDLD  Q+ ALASCFIPGD+SNEQI LR  +A+PLQQLQD ARRIAEIQ 
Sbjct: 859  VTELMFNGTFNDLDHHQIAALASCFIPGDKSNEQIQLRTELARPLQQLQDSARRIAEIQH 918

Query: 719  ECKLEVNVDKYVESTVRPYLMDAIVGQXXXXXXXXXXXXXXXXXXXXXEILEMTDIFEGS 898
            ECKL++NV++YVESTVRP+LMD I                        E+++MTDIFEGS
Sbjct: 919  ECKLDINVEEYVESTVRPHLMDVI--------------YCWSKGASFSEVIQMTDIFEGS 964

Query: 899  FIRLARRFDEFLNQLRSAAHAVGELVLESKFAAGSESLRRGIMFANSLY 1045
             IR ARR DEFLNQLR+AA+AVGE+ LESKF+A SESLRRGIMFANSLY
Sbjct: 965  IIRSARRLDEFLNQLRAAANAVGEVNLESKFSAASESLRRGIMFANSLY 1013


>ref|XP_002266524.2| PREDICTED: superkiller viralicidic activity 2-like 2-like [Vitis
            vinifera]
          Length = 995

 Score =  338 bits (868), Expect = 1e-90
 Identities = 201/348 (57%), Positives = 228/348 (65%)
 Frame = +2

Query: 2    VPVQLPLICALSNCRVSVPSDLRPVEAWQSILLAVQ*LVSGFPNGFQSLIQ*RIWALRIQ 181
            VPVQL LI ALS  R+S+P DLRP+EA QSILLAVQ L + FP G   L   +   +   
Sbjct: 682  VPVQLSLISALSKLRISIPPDLRPLEARQSILLAVQELGTRFPQGLPKLNPVKDMGIEDP 741

Query: 182  SLLSWLIKLRNLRRNCLLIHYIRPLKTRK*YGTDQMFPKKSRGES*NSTAQIKDA*FSXX 361
              +    ++  L +      +  PL   +     + F +K+  E  +   Q+K       
Sbjct: 742  EFVELANQIEELEQKL----FAHPLHKSQDENQIRSFQRKA--EVNHEIQQLKTK----- 790

Query: 362  XXXXXXXXXXXXXXXLQKFRDELKNRSRVLKKLGHIDADGIVQLKGRAACLIDTGDELLV 541
                           LQKFRDELKNRSRVLKKLGHIDADG+VQLKGRAACLIDTGDELLV
Sbjct: 791  ----------MRDSQLQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLV 840

Query: 542  MELMFNGMFNDLDPDQVVALASCFIPGDRSNEQIHLRA*IAKPLQQLQDCARRIAEIQ*E 721
             ELMFNG FNDLD  QV ALASCFIPGD+S EQIHLR  +AKPLQQLQD ARRIAEIQ E
Sbjct: 841  TELMFNGTFNDLDHHQVAALASCFIPGDKSTEQIHLRTELAKPLQQLQDSARRIAEIQHE 900

Query: 722  CKLEVNVDKYVESTVRPYLMDAIVGQXXXXXXXXXXXXXXXXXXXXXEILEMTDIFEGSF 901
            CKLEVNVD+YVEST RPYLMD I                        E+++MTDIFEGS 
Sbjct: 901  CKLEVNVDEYVESTARPYLMDVI--------------YCWSKGATFAEVIQMTDIFEGSI 946

Query: 902  IRLARRFDEFLNQLRSAAHAVGELVLESKFAAGSESLRRGIMFANSLY 1045
            IR ARR DEFLNQLR+AA+AVGE  LE+KFAA SESLRRGIMFANSLY
Sbjct: 947  IRSARRLDEFLNQLRAAANAVGEANLENKFAAASESLRRGIMFANSLY 994


>emb|CBI24057.3| unnamed protein product [Vitis vinifera]
          Length = 938

 Score =  338 bits (868), Expect = 1e-90
 Identities = 201/348 (57%), Positives = 228/348 (65%)
 Frame = +2

Query: 2    VPVQLPLICALSNCRVSVPSDLRPVEAWQSILLAVQ*LVSGFPNGFQSLIQ*RIWALRIQ 181
            VPVQL LI ALS  R+S+P DLRP+EA QSILLAVQ L + FP G   L   +   +   
Sbjct: 625  VPVQLSLISALSKLRISIPPDLRPLEARQSILLAVQELGTRFPQGLPKLNPVKDMGIEDP 684

Query: 182  SLLSWLIKLRNLRRNCLLIHYIRPLKTRK*YGTDQMFPKKSRGES*NSTAQIKDA*FSXX 361
              +    ++  L +      +  PL   +     + F +K+  E  +   Q+K       
Sbjct: 685  EFVELANQIEELEQKL----FAHPLHKSQDENQIRSFQRKA--EVNHEIQQLKTK----- 733

Query: 362  XXXXXXXXXXXXXXXLQKFRDELKNRSRVLKKLGHIDADGIVQLKGRAACLIDTGDELLV 541
                           LQKFRDELKNRSRVLKKLGHIDADG+VQLKGRAACLIDTGDELLV
Sbjct: 734  ----------MRDSQLQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLV 783

Query: 542  MELMFNGMFNDLDPDQVVALASCFIPGDRSNEQIHLRA*IAKPLQQLQDCARRIAEIQ*E 721
             ELMFNG FNDLD  QV ALASCFIPGD+S EQIHLR  +AKPLQQLQD ARRIAEIQ E
Sbjct: 784  TELMFNGTFNDLDHHQVAALASCFIPGDKSTEQIHLRTELAKPLQQLQDSARRIAEIQHE 843

Query: 722  CKLEVNVDKYVESTVRPYLMDAIVGQXXXXXXXXXXXXXXXXXXXXXEILEMTDIFEGSF 901
            CKLEVNVD+YVEST RPYLMD I                        E+++MTDIFEGS 
Sbjct: 844  CKLEVNVDEYVESTARPYLMDVI--------------YCWSKGATFAEVIQMTDIFEGSI 889

Query: 902  IRLARRFDEFLNQLRSAAHAVGELVLESKFAAGSESLRRGIMFANSLY 1045
            IR ARR DEFLNQLR+AA+AVGE  LE+KFAA SESLRRGIMFANSLY
Sbjct: 890  IRSARRLDEFLNQLRAAANAVGEANLENKFAAASESLRRGIMFANSLY 937


>ref|XP_002308126.1| predicted protein [Populus trichocarpa] gi|222854102|gb|EEE91649.1|
            predicted protein [Populus trichocarpa]
          Length = 985

 Score =  337 bits (863), Expect = 5e-90
 Identities = 194/348 (55%), Positives = 234/348 (67%)
 Frame = +2

Query: 2    VPVQLPLICALSNCRVSVPSDLRPVEAWQSILLAVQ*LVSGFPNGFQSLIQ*RIWALRIQ 181
            VPVQLPLICALS  R+S+P+DLRP+EA QSILLAVQ L + FP G   L   +   +   
Sbjct: 672  VPVQLPLICALSKVRISIPADLRPLEARQSILLAVQELGNRFPEGLPKLNPVKDMKIEDP 731

Query: 182  SLLSWLIKLRNLRRNCLLIHYIRPLKTRK*YGTDQMFPKKSRGES*NSTAQIKDA*FSXX 361
             ++  + ++  L +      +  PL   +     + F +K+  E  +   Q+K       
Sbjct: 732  EIVELVNQIEELEQKL----HAHPLNKSQDINQMKSFHRKA--EVNHEIQQLKSK----- 780

Query: 362  XXXXXXXXXXXXXXXLQKFRDELKNRSRVLKKLGHIDADGIVQLKGRAACLIDTGDELLV 541
                           LQKFR+ELKNRSRVLK+LGHIDADG+VQ+KGRAACLIDTGDELLV
Sbjct: 781  ----------MRDSQLQKFREELKNRSRVLKRLGHIDADGVVQVKGRAACLIDTGDELLV 830

Query: 542  MELMFNGMFNDLDPDQVVALASCFIPGDRSNEQIHLRA*IAKPLQQLQDCARRIAEIQ*E 721
             ELMFNG FNDLD  QV ALASCFIP D+S+EQIHLR  +AKPLQQLQ+ AR+IAEIQ E
Sbjct: 831  TELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIHLRTELAKPLQQLQESARKIAEIQYE 890

Query: 722  CKLEVNVDKYVESTVRPYLMDAIVGQXXXXXXXXXXXXXXXXXXXXXEILEMTDIFEGSF 901
            CKL++NVD+YVESTVRP+L+D +                        E+++MTDIFEGS 
Sbjct: 891  CKLDINVDEYVESTVRPFLVDVV--------------YCWSKGASFSEVIQMTDIFEGSI 936

Query: 902  IRLARRFDEFLNQLRSAAHAVGELVLESKFAAGSESLRRGIMFANSLY 1045
            IR ARR DEFLNQLR+AA AVGE+ LESKFAA SESLRRGIMFANSLY
Sbjct: 937  IRSARRLDEFLNQLRAAAQAVGEVSLESKFAAASESLRRGIMFANSLY 984


>ref|XP_002883745.1| HUA enhancer 2 [Arabidopsis lyrata subsp. lyrata]
            gi|297329585|gb|EFH60004.1| HUA enhancer 2 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 984

 Score =  335 bits (858), Expect = 2e-89
 Identities = 201/348 (57%), Positives = 231/348 (66%)
 Frame = +2

Query: 2    VPVQLPLICALSNCRVSVPSDLRPVEAWQSILLAVQ*LVSGFPNGFQSLIQ*RIWALRIQ 181
            VPVQLPLI ALS  R+SVPSDLRPVEA QSILLAVQ L S FP GF  L   +   ++  
Sbjct: 671  VPVQLPLISALSRLRISVPSDLRPVEARQSILLAVQELSSRFPLGFPKLHPVKDMNIQDT 730

Query: 182  SLLSWLIKLRNLRRNCLLIHYIRPLKTRK*YGTDQMFPKKSRGES*NSTAQIKDA*FSXX 361
             ++  +  +  + +  LL H +      K     Q+   + + E      Q+K       
Sbjct: 731  EIVDLVSHIEEVEQK-LLAHPMH-----KSQDDQQIKSFQRKAEVNYEIQQLKSK----- 779

Query: 362  XXXXXXXXXXXXXXXLQKFRDELKNRSRVLKKLGHIDADGIVQLKGRAACLIDTGDELLV 541
                           LQKFRDELKNRSRVLKKLGHIDADG+VQLKGRAACLIDTGDELLV
Sbjct: 780  ----------MRDSQLQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLV 829

Query: 542  MELMFNGMFNDLDPDQVVALASCFIPGDRSNEQIHLRA*IAKPLQQLQDCARRIAEIQ*E 721
             ELMFNG FNDLD  QV ALASCFIP D+SNEQ++LR  + KPLQQLQD AR+IAEIQ E
Sbjct: 830  TELMFNGTFNDLDHHQVAALASCFIPVDKSNEQVNLRNELTKPLQQLQDSARKIAEIQHE 889

Query: 722  CKLEVNVDKYVESTVRPYLMDAIVGQXXXXXXXXXXXXXXXXXXXXXEILEMTDIFEGSF 901
            CKLE++V++YVEST+RP+LMD I                        EI++MTDIFEGS 
Sbjct: 890  CKLEIDVEEYVESTIRPFLMDVIYS--------------WSKGASFAEIIQMTDIFEGSI 935

Query: 902  IRLARRFDEFLNQLRSAAHAVGELVLESKFAAGSESLRRGIMFANSLY 1045
            IR ARR DEFLNQLR+AA AVGE  LESKFAA SESLRRGIMFANSLY
Sbjct: 936  IRSARRLDEFLNQLRAAADAVGESSLESKFAATSESLRRGIMFANSLY 983


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