BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005836
         (1085 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275301.2| PREDICTED: uncharacterized tRNA-binding prot...   351   2e-94
emb|CAN60565.1| hypothetical protein VITISV_013997 [Vitis vinifera]   343   6e-92
ref|XP_002879883.1| tRNA-binding region domain-containing protei...   339   6e-91
ref|XP_002325488.1| predicted protein [Populus trichocarpa] gi|2...   338   2e-90
ref|XP_002520877.1| methionyl-tRNA synthetase, putative [Ricinus...   337   2e-90

>ref|XP_002275301.2| PREDICTED: uncharacterized tRNA-binding protein C30C2.04-like [Vitis
            vinifera] gi|297736480|emb|CBI25351.3| unnamed protein
            product [Vitis vinifera]
          Length = 392

 Score =  351 bits (900), Expect = 2e-94
 Identities = 192/353 (54%), Positives = 243/353 (68%)
 Frame = -2

Query: 1060 KQKQAILSSLCKHLSLDPKSLSDQSVEGSDVKSLFVNILNSSGKDGHLENNEVLNWITFA 881
            ++KQ+I+SSLCKHLSLDPK   D  VE +D+KSL  NIL SSG+     ++EV  WI+FA
Sbjct: 13   RRKQSIVSSLCKHLSLDPKIFLDSIVE-NDIKSLCANILKSSGR-APKNSDEVSKWISFA 70

Query: 880  DSFVKNSDGCNELLKKLNEDLIVKSVLLGDGFNPSAADVVVFSAVHLFVIGLSATERKKY 701
            +S+  +S  C   L  +NE+L  KSVL+GDG  PS ADV+VFS +H FVIGL  TER+K 
Sbjct: 71   ESYPVDSKACFGALHVINEELAEKSVLMGDGLKPSEADVIVFSLLHPFVIGLPNTERQKL 130

Query: 700  VNVLRWMDYIQNKEDLLEIFEIVPVEKTCFDPPVLKDGSKVEAXXXXXXSVQGPKTDEKS 521
             +++RWM+YIQ+KE+  E+F  + +E    + P  K   K+EA      +VQ  K  + +
Sbjct: 131  PHLVRWMEYIQSKENFGELFPKILLENDVIELPKPKIVVKLEADPNAKKTVQSTKNADNT 190

Query: 520  KVDSNSKKTDELEAISNAEMNDKLETDTXXXXXXXXXXXXXXXKVTEEKKKAPEKESTAK 341
            + + NSKK+D ++ ++                              E+KKK PEKE+  K
Sbjct: 191  EANPNSKKSDVVKKVTGNNA------------------------AAEQKKKLPEKEAVEK 226

Query: 340  DVEVSVSLLNIQVGLIRKAWKHPSADSLLVEEIDLGDGGIRQVVSGLAKHCSPDALLNRR 161
            D EVS+SLLNIQVGLIRKAWKHPSADSLLVEEID+GD  +RQVVSGLAK+CSP+ L NRR
Sbjct: 227  DKEVSISLLNIQVGLIRKAWKHPSADSLLVEEIDVGDAKLRQVVSGLAKYCSPEELTNRR 286

Query: 160  VALITNVKPGKLRDVASSGLVLCASNSEQTVVEPLLPPEGAKIGERVTFSGHD 2
            V LITNVKPGKLRDV S GLVLCASN + T VEPLLPPEGAKIGERV+FSG++
Sbjct: 287  VVLITNVKPGKLRDVMSEGLVLCASNEDHTGVEPLLPPEGAKIGERVSFSGNE 339


>emb|CAN60565.1| hypothetical protein VITISV_013997 [Vitis vinifera]
          Length = 523

 Score =  343 bits (879), Expect = 6e-92
 Identities = 197/379 (51%), Positives = 247/379 (65%), Gaps = 26/379 (6%)
 Frame = -2

Query: 1060 KQKQAILSSLCKHLSLDPKSLSDQSVEGSDVKSLFVNILNSSGKDGHLENNEVLNWITFA 881
            ++KQ+I+SSLCKHLSLDPK   D  VE +D+KSL  NIL SSG+     ++EV  WI+FA
Sbjct: 100  RRKQSIVSSLCKHLSLDPKIFLDSIVE-NDIKSLCANILKSSGR-APKNSDEVSKWISFA 157

Query: 880  DSFVKNSDGCNELLKKLNEDLIVKSVLLGDGFNPSAADVVVFSAVHLFVIGLSATERKKY 701
            +S+  +S  C   L  +NE+L  KSVL GDG  PS ADV+VFS +H FVIGL  TER+K 
Sbjct: 158  ESYPVDSXACFGALHVINEELAEKSVLXGDGLKPSEADVIVFSLLHPFVIGLPNTERQKL 217

Query: 700  VNVLRWMDYIQNKEDLLEIFEIVPVEKTCFDPPVLKDGS--------------------- 584
             +++RWM+YIQ+KE+  E+F  + +E    + PV +DGS                     
Sbjct: 218  PHLVRWMEYIQSKENFGELFPKILLENDVIELPV-EDGSNRKEEFVFTSVDVILYWLNTD 276

Query: 583  -----KVEAXXXXXXSVQGPKTDEKSKVDSNSKKTDELEAISNAEMNDKLETDTXXXXXX 419
                 K +       +++ PK   K + D N+KKT  +++  NA   D  E +       
Sbjct: 277  SARMFKCKVAEAFFIAIKKPKIVVKLEADPNAKKT--VQSTKNA---DNTEANPNSKKSD 331

Query: 418  XXXXXXXXXKVTEEKKKAPEKESTAKDVEVSVSLLNIQVGLIRKAWKHPSADSLLVEEID 239
                        E+KKK PEKE+  KD EVS+SLLNIQVGLIRKAWKHPSADSLLVEEID
Sbjct: 332  VVKKVTGNNAAAEQKKKLPEKEAVEKDKEVSISLLNIQVGLIRKAWKHPSADSLLVEEID 391

Query: 238  LGDGGIRQVVSGLAKHCSPDALLNRRVALITNVKPGKLRDVASSGLVLCASNSEQTVVEP 59
            +GD  +RQVVSGLAK+CSP+ L NRRV LITNVKPGKLRDV S GLVLCASN + T VEP
Sbjct: 392  VGDAKLRQVVSGLAKYCSPEELTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTGVEP 451

Query: 58   LLPPEGAKIGERVTFSGHD 2
            LLPPEGAKIGERV+FSG++
Sbjct: 452  LLPPEGAKIGERVSFSGNE 470


>ref|XP_002879883.1| tRNA-binding region domain-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297325722|gb|EFH56142.1| tRNA-binding
            region domain-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 389

 Score =  339 bits (870), Expect = 6e-91
 Identities = 190/356 (53%), Positives = 238/356 (66%), Gaps = 2/356 (0%)
 Frame = -2

Query: 1069 MESKQKQAILSSLCKHLSLDPKSLSDQSVEGSDVKSLFVNILNSSGKDGHLENNEVLNWI 890
            M+SK KQ ILS+LCKH SLDP+     + + SDV++L+ N+L +SGK+   +N+EVL W+
Sbjct: 1    MDSKTKQMILSALCKHFSLDPEPFLGGAGD-SDVRTLYSNVLKASGKEVSAQNDEVLKWL 59

Query: 889  TFADSFVKNSDGCNELLKKLNEDLIVKSVLLGDGFNPSAADVVVFSAVHLFVIGLSATER 710
             FA+ F  NS  C   L+KLN +L  KSVLLG+G  PSAADV VFSA+H  V+GLS + +
Sbjct: 60   DFAEGFSANSKDCYAALEKLNLELATKSVLLGNGLTPSAADVAVFSALHSSVLGLSDSNK 119

Query: 709  KKYVNVLRWMDYIQNKEDLLEIFEIVPVEKTCFDPPVLKDGSKVEAXXXXXXSVQGPKTD 530
            +K  +V+RW++YIQNKE+L  +F  +PV+   FD  V K   KVEA      + +G K  
Sbjct: 120  EKVPHVIRWVNYIQNKEELSTLFAPIPVKLPEFDFEVSKPAIKVEANSNTKKAAEGVKPV 179

Query: 529  EKSKVDSN--SKKTDELEAISNAEMNDKLETDTXXXXXXXXXXXXXXXKVTEEKKKAPEK 356
            +KS       +KKT+  E   NA      +                     +EKKK  E 
Sbjct: 180  DKSDAQPQPITKKTEPEEPKKNATKEKDAK---------------------KEKKKPAES 218

Query: 355  ESTAKDVEVSVSLLNIQVGLIRKAWKHPSADSLLVEEIDLGDGGIRQVVSGLAKHCSPDA 176
            E   K+ E+SVSLLNIQVGLIRKAWKHPSADSLLVEEID+G+  +RQVVSGLAK C+PD 
Sbjct: 219  EPAKKEAELSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEDKVRQVVSGLAKFCNPDD 278

Query: 175  LLNRRVALITNVKPGKLRDVASSGLVLCASNSEQTVVEPLLPPEGAKIGERVTFSG 8
            L NR VALITNVKPGKLRDV S GLVLCAS+ + +VVEPLLPP GAK GERV+FSG
Sbjct: 279  LTNRLVALITNVKPGKLRDVMSQGLVLCASSEDHSVVEPLLPPAGAKPGERVSFSG 334


>ref|XP_002325488.1| predicted protein [Populus trichocarpa] gi|222862363|gb|EEE99869.1|
            predicted protein [Populus trichocarpa]
          Length = 425

 Score =  338 bits (866), Expect = 2e-90
 Identities = 194/357 (54%), Positives = 238/357 (66%), Gaps = 1/357 (0%)
 Frame = -2

Query: 1069 MESKQKQAILSSLCKHLSLDPKSLSDQSVEGSDVKSLFVNILNSSGKDG-HLENNEVLNW 893
            M  ++KQ I S+L KHLSL P++ S    E  D+KSL++NIL SSGK     E+ EV+ W
Sbjct: 43   MGLQRKQIISSALSKHLSLSPEAPSGDLGE-YDIKSLYLNILKSSGKRSPSKESEEVMKW 101

Query: 892  ITFADSFVKNSDGCNELLKKLNEDLIVKSVLLGDGFNPSAADVVVFSAVHLFVIGLSATE 713
            I+FA+ F  +S  C + L  LN+DL + SVLLG+G  PS AD++VFS +H  VIGLS  E
Sbjct: 102  ISFAEIFPIDSPTCFDALSGLNKDLALNSVLLGNGLTPSEADIIVFSVIHSSVIGLSHLE 161

Query: 712  RKKYVNVLRWMDYIQNKEDLLEIFEIVPVEKTCFDPPVLKDGSKVEAXXXXXXSVQGPKT 533
            R+K V+V+RWMDYIQNK D  ++FE V +EK  F+                   +QG K 
Sbjct: 162  REKLVHVMRWMDYIQNKVDFGKLFEKVLLEKGAFE-------------------LQGIKG 202

Query: 532  DEKSKVDSNSKKTDELEAISNAEMNDKLETDTXXXXXXXXXXXXXXXKVTEEKKKAPEKE 353
            D KS++D+N+KKT     + N +  +K E D                   +EKKK  E E
Sbjct: 203  DAKSEIDTNAKKT-----VENTKNKEKSEADLSMKKSDNKSTGKKES--AQEKKKPSETE 255

Query: 352  STAKDVEVSVSLLNIQVGLIRKAWKHPSADSLLVEEIDLGDGGIRQVVSGLAKHCSPDAL 173
            +  KD E+SVSLLNIQVGLIRKAWKHPSADSLLVEEID+GD  +RQVVSGLAK  SPD L
Sbjct: 256  AGEKDKELSVSLLNIQVGLIRKAWKHPSADSLLVEEIDIGDAKLRQVVSGLAKFYSPDDL 315

Query: 172  LNRRVALITNVKPGKLRDVASSGLVLCASNSEQTVVEPLLPPEGAKIGERVTFSGHD 2
             NRRV LITNVKPGKLRDV S GLVLCASN + T+VEPLLPPEGAK+GERV+F G D
Sbjct: 316  TNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTIVEPLLPPEGAKVGERVSFLGID 372


>ref|XP_002520877.1| methionyl-tRNA synthetase, putative [Ricinus communis]
            gi|223540008|gb|EEF41586.1| methionyl-tRNA synthetase,
            putative [Ricinus communis]
          Length = 391

 Score =  337 bits (865), Expect = 2e-90
 Identities = 190/355 (53%), Positives = 235/355 (66%), Gaps = 2/355 (0%)
 Frame = -2

Query: 1060 KQKQAILSSLCKHLSLDP-KSLSDQSVEGSDVKSLFVNILNSSGK-DGHLENNEVLNWIT 887
            K+ Q I S+L KHLSL    SLS+    G D+KSL+VNIL SSGK     EN+EV+ WI 
Sbjct: 11   KRNQLIASALSKHLSLHSGTSLSE--CRGDDIKSLYVNILKSSGKWSQQKENDEVMKWID 68

Query: 886  FADSFVKNSDGCNELLKKLNEDLIVKSVLLGDGFNPSAADVVVFSAVHLFVIGLSATERK 707
            FA+SF  ++  C   L  LN+ L +KSVLLG+G  PS ADV+VFS +H  VIGLS +E++
Sbjct: 69   FAESFPVDTSACFNALNGLNQHLALKSVLLGNGVTPSEADVIVFSVIHSSVIGLSHSEKE 128

Query: 706  KYVNVLRWMDYIQNKEDLLEIFEIVPVEKTCFDPPVLKDGSKVEAXXXXXXSVQGPKTDE 527
            K   V+RWMDYIQ+KE  ++  E + +EK  F+P   K  +K+E       S+Q  K  E
Sbjct: 129  KLTQVMRWMDYIQHKETFVDPAERILLEKPAFEPLSTKAVAKIEVDSNVKKSMQSTKNTE 188

Query: 526  KSKVDSNSKKTDELEAISNAEMNDKLETDTXXXXXXXXXXXXXXXKVTEEKKKAPEKEST 347
            K   + + KK+D  + ++  E                           +EKKK  + E  
Sbjct: 189  KPDAEHSRKKSDAGKKVTEKES-------------------------VQEKKKPAQTEPA 223

Query: 346  AKDVEVSVSLLNIQVGLIRKAWKHPSADSLLVEEIDLGDGGIRQVVSGLAKHCSPDALLN 167
             K+ EVSVSLLNIQVGLIRKAWKHPSADSLLVEEID+G+  +RQVVSGLAK C+PD L+N
Sbjct: 224  EKEKEVSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKLRQVVSGLAKFCTPDELMN 283

Query: 166  RRVALITNVKPGKLRDVASSGLVLCASNSEQTVVEPLLPPEGAKIGERVTFSGHD 2
            R V LITNVKPGKLRDVAS GLVLCASN + +VVEPLLPPEGAKIGERV+FSG D
Sbjct: 284  RHVVLITNVKPGKLRDVASEGLVLCASNGDHSVVEPLLPPEGAKIGERVSFSGFD 338