BLASTX nr result

ID: Coptis25_contig00005835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005835
         (1160 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283248.1| PREDICTED: octanoyltransferase [Vitis vinifera]   363   3e-98
ref|XP_002297668.1| predicted protein [Populus trichocarpa] gi|2...   360   3e-97
ref|XP_002889518.1| hypothetical protein ARALYDRAFT_311551 [Arab...   353   3e-95
gb|AAB80636.1| Contains similarity to Mycobacterium LIPB gene (g...   351   2e-94
ref|NP_171958.1| lipoyl(octanoyl) transferase [Arabidopsis thali...   349   7e-94

>ref|XP_002283248.1| PREDICTED: octanoyltransferase [Vitis vinifera]
          Length = 235

 Score =  363 bits (933), Expect = 3e-98
 Identities = 179/215 (83%), Positives = 195/215 (90%)
 Frame = -2

Query: 1027 MRIPRNLNVWKMGMVNYLDALKLQEKLVSDRKLGKIPDTILSLQHPPTYTLGKRRTDHNL 848
            MR+PR+L VWKMG VNYLDALKLQ+KL+S RK  KI DT+LSLQHPPTYTLGKRRTDHNL
Sbjct: 1    MRVPRSLEVWKMGTVNYLDALKLQDKLISRRKTHKISDTVLSLQHPPTYTLGKRRTDHNL 60

Query: 847  LVPEADLRTMGAELHYTQRGGDITYHGPHQAILYPIISLKDKGLGARKYVENLESIMIEL 668
            LVPE+DL+T+GAELHYTQRGGDIT+HGPHQAILYPIISL+D GLGAR YVE LE  MIEL
Sbjct: 61   LVPESDLKTIGAELHYTQRGGDITFHGPHQAILYPIISLRDIGLGARNYVEKLELTMIEL 120

Query: 667  ASLYGVSALAGMNKCETGVWVGDRKIGAIGVRISSGITSHGMAFNIDPDLNYFKHIVPCG 488
            ASLYGV A AG    ETGVWVG+RKIGAIGVRISSGITSHG+AFNIDPDLNYFKHIVPCG
Sbjct: 121  ASLYGVKARAG-GVGETGVWVGERKIGAIGVRISSGITSHGLAFNIDPDLNYFKHIVPCG 179

Query: 487  IADKEVTSLKRETNMVLPAEEVIQEQLVSCFARSF 383
            IADKEVTSL+RET++VLP EEVI EQL+SCFAR F
Sbjct: 180  IADKEVTSLRRETDLVLPTEEVIHEQLISCFARLF 214


>ref|XP_002297668.1| predicted protein [Populus trichocarpa] gi|222844926|gb|EEE82473.1|
            predicted protein [Populus trichocarpa]
          Length = 239

 Score =  360 bits (925), Expect = 3e-97
 Identities = 176/216 (81%), Positives = 192/216 (88%)
 Frame = -2

Query: 1027 MRIPRNLNVWKMGMVNYLDALKLQEKLVSDRKLGKIPDTILSLQHPPTYTLGKRRTDHNL 848
            M  PR+L VWK+G VNYL+ALKLQEKLV DRK  KIPDT+LSLQHPPTYTLGKRRTDHNL
Sbjct: 1    MIFPRSLEVWKLGKVNYLEALKLQEKLVCDRKAYKIPDTLLSLQHPPTYTLGKRRTDHNL 60

Query: 847  LVPEADLRTMGAELHYTQRGGDITYHGPHQAILYPIISLKDKGLGARKYVENLESIMIEL 668
            L+P  +L  +GAELHYTQRGGDITYHGPHQAILYPIISL+D GLGARKYVE LE  MI++
Sbjct: 61   LIPVPELEKIGAELHYTQRGGDITYHGPHQAILYPIISLRDIGLGARKYVEKLELTMIDM 120

Query: 667  ASLYGVSALAGMNKCETGVWVGDRKIGAIGVRISSGITSHGMAFNIDPDLNYFKHIVPCG 488
            AS YGV A AG  KCETGVWVGDRKIGAIGVRISSGITSHG+AFN+DPDL+YFKHIVPCG
Sbjct: 121  ASQYGVKACAG-KKCETGVWVGDRKIGAIGVRISSGITSHGLAFNVDPDLDYFKHIVPCG 179

Query: 487  IADKEVTSLKRETNMVLPAEEVIQEQLVSCFARSFG 380
            IADKEVTSL+RET  VLP+EEVI EQL+SCFAR FG
Sbjct: 180  IADKEVTSLRRETGTVLPSEEVIHEQLISCFARIFG 215


>ref|XP_002889518.1| hypothetical protein ARALYDRAFT_311551 [Arabidopsis lyrata subsp.
            lyrata] gi|297335360|gb|EFH65777.1| hypothetical protein
            ARALYDRAFT_311551 [Arabidopsis lyrata subsp. lyrata]
          Length = 333

 Score =  353 bits (907), Expect = 3e-95
 Identities = 172/216 (79%), Positives = 191/216 (88%)
 Frame = -2

Query: 1030 EMRIPRNLNVWKMGMVNYLDALKLQEKLVSDRKLGKIPDTILSLQHPPTYTLGKRRTDHN 851
            EMR PR L VWK+G VNYL +LKLQEKLVS+RK   IPDT+LSLQHPPTYTLGKRRTDHN
Sbjct: 98   EMRSPRTLEVWKLGTVNYLKSLKLQEKLVSERKAHHIPDTLLSLQHPPTYTLGKRRTDHN 157

Query: 850  LLVPEADLRTMGAELHYTQRGGDITYHGPHQAILYPIISLKDKGLGARKYVENLESIMIE 671
            LL+PE++L  +GAELHYTQRGGDIT+HGPHQAILYPIISL+  G GAR YVE LE  MIE
Sbjct: 158  LLIPESELTKIGAELHYTQRGGDITFHGPHQAILYPIISLRSIGFGARNYVETLERSMIE 217

Query: 670  LASLYGVSALAGMNKCETGVWVGDRKIGAIGVRISSGITSHGMAFNIDPDLNYFKHIVPC 491
             AS+YGV A AG NKCETGVWVGDRKIGAIGVRISSGITSHG+AFNIDPDL YF+HIVPC
Sbjct: 218  FASIYGVKARAG-NKCETGVWVGDRKIGAIGVRISSGITSHGLAFNIDPDLKYFEHIVPC 276

Query: 490  GIADKEVTSLKRETNMVLPAEEVIQEQLVSCFARSF 383
            GIADKEVTSL+RET+ +LP+EEVI EQLVSC A++F
Sbjct: 277  GIADKEVTSLRRETDTLLPSEEVIHEQLVSCLAKAF 312


>gb|AAB80636.1| Contains similarity to Mycobacterium LIPB gene (gb|Q104041)
            [Arabidopsis thaliana]
          Length = 333

 Score =  351 bits (901), Expect = 2e-94
 Identities = 170/216 (78%), Positives = 191/216 (88%)
 Frame = -2

Query: 1030 EMRIPRNLNVWKMGMVNYLDALKLQEKLVSDRKLGKIPDTILSLQHPPTYTLGKRRTDHN 851
            EMR PR L VWK+G VNYL +LKLQEKLVS+RK  +IPDT+LSLQHPPTYTLGKRRTDHN
Sbjct: 98   EMRSPRTLEVWKLGTVNYLKSLKLQEKLVSERKAHQIPDTLLSLQHPPTYTLGKRRTDHN 157

Query: 850  LLVPEADLRTMGAELHYTQRGGDITYHGPHQAILYPIISLKDKGLGARKYVENLESIMIE 671
            LL+PE++L  +GAELHYTQRGGDIT+HGPHQAILYPIISL+  G GAR YVE LE  MIE
Sbjct: 158  LLIPESELTKIGAELHYTQRGGDITFHGPHQAILYPIISLRSIGFGARNYVETLERSMIE 217

Query: 670  LASLYGVSALAGMNKCETGVWVGDRKIGAIGVRISSGITSHGMAFNIDPDLNYFKHIVPC 491
             AS+YGV A AG NKCETGVWVGDRKIGAIGVRISSGITSHG+A NIDPD+ YF+HIVPC
Sbjct: 218  FASIYGVKARAG-NKCETGVWVGDRKIGAIGVRISSGITSHGLALNIDPDMKYFEHIVPC 276

Query: 490  GIADKEVTSLKRETNMVLPAEEVIQEQLVSCFARSF 383
            GIADKEVTSL+RET+ +LP+EEVI EQLVSC A++F
Sbjct: 277  GIADKEVTSLRRETDTLLPSEEVIHEQLVSCLAKAF 312


>ref|NP_171958.1| lipoyl(octanoyl) transferase [Arabidopsis thaliana]
            gi|79316647|ref|NP_001030961.1| lipoyl(octanoyl)
            transferase [Arabidopsis thaliana]
            gi|75213274|sp|Q9SXP7.1|LIPB_ARATH RecName:
            Full=Octanoyltransferase; AltName: Full=Lipoate
            biosynthesis protein; AltName: Full=Lipoate-protein
            ligase; AltName: Full=Lipoyl ligase; AltName:
            Full=Lipoyl/octanoyl transferase; AltName:
            Full=Octanoyl-[acyl-carrier-protein]-protein
            N-octanoyltransferase
            gi|16226271|gb|AAL16120.1|AF428288_1 At1g04640/T1G11_10
            [Arabidopsis thaliana] gi|4996286|dbj|BAA78386.1|
            lipoyltransferase [Arabidopsis thaliana]
            gi|22137226|gb|AAM91458.1| At1g04640/T1G11_10
            [Arabidopsis thaliana] gi|332189605|gb|AEE27726.1|
            lipoyl(octanoyl) transferase [Arabidopsis thaliana]
            gi|332189606|gb|AEE27727.1| lipoyl(octanoyl) transferase
            [Arabidopsis thaliana]
          Length = 235

 Score =  349 bits (896), Expect = 7e-94
 Identities = 169/215 (78%), Positives = 190/215 (88%)
 Frame = -2

Query: 1027 MRIPRNLNVWKMGMVNYLDALKLQEKLVSDRKLGKIPDTILSLQHPPTYTLGKRRTDHNL 848
            MR PR L VWK+G VNYL +LKLQEKLVS+RK  +IPDT+LSLQHPPTYTLGKRRTDHNL
Sbjct: 1    MRSPRTLEVWKLGTVNYLKSLKLQEKLVSERKAHQIPDTLLSLQHPPTYTLGKRRTDHNL 60

Query: 847  LVPEADLRTMGAELHYTQRGGDITYHGPHQAILYPIISLKDKGLGARKYVENLESIMIEL 668
            L+PE++L  +GAELHYTQRGGDIT+HGPHQAILYPIISL+  G GAR YVE LE  MIE 
Sbjct: 61   LIPESELTKIGAELHYTQRGGDITFHGPHQAILYPIISLRSIGFGARNYVETLERSMIEF 120

Query: 667  ASLYGVSALAGMNKCETGVWVGDRKIGAIGVRISSGITSHGMAFNIDPDLNYFKHIVPCG 488
            AS+YGV A AG NKCETGVWVGDRKIGAIGVRISSGITSHG+A NIDPD+ YF+HIVPCG
Sbjct: 121  ASIYGVKARAG-NKCETGVWVGDRKIGAIGVRISSGITSHGLALNIDPDMKYFEHIVPCG 179

Query: 487  IADKEVTSLKRETNMVLPAEEVIQEQLVSCFARSF 383
            IADKEVTSL+RET+ +LP+EEVI EQLVSC A++F
Sbjct: 180  IADKEVTSLRRETDTLLPSEEVIHEQLVSCLAKAF 214


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