BLASTX nr result

ID: Coptis25_contig00005816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005816
         (910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABM05488.1| Impa2 [Nicotiana benthamiana]                          195   3e-64
ref|XP_002519178.1| importin alpha, putative [Ricinus communis] ...   197   4e-64
ref|XP_003546338.1| PREDICTED: importin subunit alpha-1-like [Gl...   196   1e-63
ref|XP_003533220.1| PREDICTED: importin subunit alpha-1-like [Gl...   196   1e-63
ref|XP_003550530.1| PREDICTED: importin subunit alpha-1-like [Gl...   195   3e-63

>gb|ABM05488.1| Impa2 [Nicotiana benthamiana]
          Length = 529

 Score =  195 bits (495), Expect(2) = 3e-64
 Identities = 105/130 (80%), Positives = 110/130 (84%), Gaps = 1/130 (0%)
 Frame = -3

Query: 566 MVEIRKNKREESLQKKRREGMTPNQQYHSSLGGGIQTS-VEKKLESLPVMVAGVWQEDRA 390
           MVEIRK+KREESL KKRREG+ P QQ        + TS VEKKLESLP MVAGVW  D  
Sbjct: 33  MVEIRKSKREESLLKKRREGLQPQQQ---PFPANLHTSTVEKKLESLPSMVAGVWSNDNN 89

Query: 389 LQLESTTQFRKLLSIERSPPIEEVIQSGVVPRFVEFLGRADFPQLQFEAAWALTNIASGT 210
           LQLE+TTQFRKLLSIERSPPIEEVIQSGVVPRFVEFL R DFPQLQFEAAWALTNIASGT
Sbjct: 90  LQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVEFLMREDFPQLQFEAAWALTNIASGT 149

Query: 209 SENTRVVIDH 180
           S+NTRVVIDH
Sbjct: 150 SDNTRVVIDH 159



 Score = 77.4 bits (189), Expect(2) = 3e-64
 Identities = 37/39 (94%), Positives = 38/39 (97%)
 Frame = -1

Query: 118 RVVIDHGAVPIFVQLLGSQSDDVREQAVWALGNVAGDSP 2
           RVVIDHGAVPIFV+LLGS SDDVREQAVWALGNVAGDSP
Sbjct: 154 RVVIDHGAVPIFVKLLGSPSDDVREQAVWALGNVAGDSP 192


>ref|XP_002519178.1| importin alpha, putative [Ricinus communis]
           gi|223541493|gb|EEF43042.1| importin alpha, putative
           [Ricinus communis]
          Length = 488

 Score =  197 bits (500), Expect(2) = 4e-64
 Identities = 103/129 (79%), Positives = 116/129 (89%)
 Frame = -3

Query: 566 MVEIRKNKREESLQKKRREGMTPNQQYHSSLGGGIQTSVEKKLESLPVMVAGVWQEDRAL 387
           MVEIRKNKREE+LQKKRREG+   QQ+ +++     +++EKKLESLP MVAGVW +D++L
Sbjct: 33  MVEIRKNKREENLQKKRREGLQA-QQFPAAVNL-TSSNMEKKLESLPAMVAGVWSDDKSL 90

Query: 386 QLESTTQFRKLLSIERSPPIEEVIQSGVVPRFVEFLGRADFPQLQFEAAWALTNIASGTS 207
           QLE+TTQFRKLLSIERSPPIEEVIQSGVVPRFVEFL R DFPQLQFEAAWALTNIASGTS
Sbjct: 91  QLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVEFLVREDFPQLQFEAAWALTNIASGTS 150

Query: 206 ENTRVVIDH 180
           ENTRVVIDH
Sbjct: 151 ENTRVVIDH 159



 Score = 75.1 bits (183), Expect(2) = 4e-64
 Identities = 36/39 (92%), Positives = 37/39 (94%)
 Frame = -1

Query: 118 RVVIDHGAVPIFVQLLGSQSDDVREQAVWALGNVAGDSP 2
           RVVIDHGAVPIFV+LL S SDDVREQAVWALGNVAGDSP
Sbjct: 154 RVVIDHGAVPIFVKLLASPSDDVREQAVWALGNVAGDSP 192


>ref|XP_003546338.1| PREDICTED: importin subunit alpha-1-like [Glycine max]
          Length = 531

 Score =  196 bits (499), Expect(2) = 1e-63
 Identities = 102/129 (79%), Positives = 112/129 (86%)
 Frame = -3

Query: 566 MVEIRKNKREESLQKKRREGMTPNQQYHSSLGGGIQTSVEKKLESLPVMVAGVWQEDRAL 387
           MVEIRK+KREESLQKKRREG+   QQ+ + L     + VEKKLESLP MVAGVW +D + 
Sbjct: 33  MVEIRKSKREESLQKKRREGLQAQQQFPTPLQAS--SIVEKKLESLPAMVAGVWSDDNSQ 90

Query: 386 QLESTTQFRKLLSIERSPPIEEVIQSGVVPRFVEFLGRADFPQLQFEAAWALTNIASGTS 207
           QLE+TTQFRKLLSIERSPPIEEVIQ+GVVPRFVEFL R DFPQLQFEAAWALTNIASGTS
Sbjct: 91  QLEATTQFRKLLSIERSPPIEEVIQAGVVPRFVEFLVREDFPQLQFEAAWALTNIASGTS 150

Query: 206 ENTRVVIDH 180
           ENT+VVIDH
Sbjct: 151 ENTKVVIDH 159



 Score = 73.9 bits (180), Expect(2) = 1e-63
 Identities = 35/39 (89%), Positives = 37/39 (94%)
 Frame = -1

Query: 118 RVVIDHGAVPIFVQLLGSQSDDVREQAVWALGNVAGDSP 2
           +VVIDHGAVPIFV+LL S SDDVREQAVWALGNVAGDSP
Sbjct: 154 KVVIDHGAVPIFVKLLSSPSDDVREQAVWALGNVAGDSP 192


>ref|XP_003533220.1| PREDICTED: importin subunit alpha-1-like [Glycine max]
          Length = 531

 Score =  196 bits (499), Expect(2) = 1e-63
 Identities = 102/129 (79%), Positives = 112/129 (86%)
 Frame = -3

Query: 566 MVEIRKNKREESLQKKRREGMTPNQQYHSSLGGGIQTSVEKKLESLPVMVAGVWQEDRAL 387
           MVEIRK+KREESLQKKRREG+   QQ+ + L     + VEKKLESLP MVAGVW +D + 
Sbjct: 33  MVEIRKSKREESLQKKRREGLQAQQQFPTPLQAA--SIVEKKLESLPAMVAGVWSDDNSQ 90

Query: 386 QLESTTQFRKLLSIERSPPIEEVIQSGVVPRFVEFLGRADFPQLQFEAAWALTNIASGTS 207
           QLE+TTQFRKLLSIERSPPIEEVIQ+GVVPRFVEFL R DFPQLQFEAAWALTNIASGTS
Sbjct: 91  QLEATTQFRKLLSIERSPPIEEVIQAGVVPRFVEFLVREDFPQLQFEAAWALTNIASGTS 150

Query: 206 ENTRVVIDH 180
           ENT+VVIDH
Sbjct: 151 ENTKVVIDH 159



 Score = 73.9 bits (180), Expect(2) = 1e-63
 Identities = 35/39 (89%), Positives = 37/39 (94%)
 Frame = -1

Query: 118 RVVIDHGAVPIFVQLLGSQSDDVREQAVWALGNVAGDSP 2
           +VVIDHGAVPIFV+LL S SDDVREQAVWALGNVAGDSP
Sbjct: 154 KVVIDHGAVPIFVKLLSSPSDDVREQAVWALGNVAGDSP 192


>ref|XP_003550530.1| PREDICTED: importin subunit alpha-1-like [Glycine max]
          Length = 530

 Score =  195 bits (495), Expect(2) = 3e-63
 Identities = 100/129 (77%), Positives = 113/129 (87%)
 Frame = -3

Query: 566 MVEIRKNKREESLQKKRREGMTPNQQYHSSLGGGIQTSVEKKLESLPVMVAGVWQEDRAL 387
           MVEIRK+KREESL KKRREG+   QQ+ + L     ++V+KKLESLP MVAGVW +D ++
Sbjct: 33  MVEIRKSKREESLLKKRREGLQAQQQFPAPLQN---STVDKKLESLPAMVAGVWSDDNSI 89

Query: 386 QLESTTQFRKLLSIERSPPIEEVIQSGVVPRFVEFLGRADFPQLQFEAAWALTNIASGTS 207
           QLE+TTQFRKLLSIERSPPIEEVIQ+GVVPRFVEFL R DFPQLQFEAAWALTNIASGTS
Sbjct: 90  QLEATTQFRKLLSIERSPPIEEVIQAGVVPRFVEFLVREDFPQLQFEAAWALTNIASGTS 149

Query: 206 ENTRVVIDH 180
           ENT+VVIDH
Sbjct: 150 ENTKVVIDH 158



 Score = 73.9 bits (180), Expect(2) = 3e-63
 Identities = 35/39 (89%), Positives = 37/39 (94%)
 Frame = -1

Query: 118 RVVIDHGAVPIFVQLLGSQSDDVREQAVWALGNVAGDSP 2
           +VVIDHGAVPIFV+LL S SDDVREQAVWALGNVAGDSP
Sbjct: 153 KVVIDHGAVPIFVKLLSSPSDDVREQAVWALGNVAGDSP 191


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