BLASTX nr result

ID: Coptis25_contig00005811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005811
         (1172 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330773.1| predicted protein [Populus trichocarpa] gi|2...   418   e-114
ref|XP_002529629.1| tRNA (guanine-n(7)-)-methyltransferase, puta...   414   e-113
ref|XP_003523726.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransf...   411   e-112
gb|AFK39576.1| unknown [Lotus japonicus]                              407   e-111
ref|XP_002332118.1| predicted protein [Populus trichocarpa] gi|2...   407   e-111

>ref|XP_002330773.1| predicted protein [Populus trichocarpa] gi|222872575|gb|EEF09706.1|
            predicted protein [Populus trichocarpa]
          Length = 252

 Score =  418 bits (1074), Expect = e-114
 Identities = 200/257 (77%), Positives = 228/257 (88%)
 Frame = -3

Query: 1026 NKSTGLPRKRFYRARAHSNPLSDSHFPVPLTPSHVDYALHYPQYFQTDHTIADNGDVNNN 847
            +KSTGLPRKRFYRARAHSNPLSDSHFPVP++PSHVDY+LHYPQ+F +      +G+V + 
Sbjct: 11   SKSTGLPRKRFYRARAHSNPLSDSHFPVPISPSHVDYSLHYPQFFSS------SGEVGS- 63

Query: 846  STASLHKTQSKKIQFADIGCGFGGLIVSLSTLFPETLMIGMEIRDKVTEYVKERILALRE 667
                      KK+QFAD+GCGFGGL++SLSTLFPETLMIGME+RDKVTEYVKERILALR 
Sbjct: 64   ---------IKKVQFADVGCGFGGLLISLSTLFPETLMIGMELRDKVTEYVKERILALRT 114

Query: 666  TNPGQYQNISVVRTNSMKYIPNFFEKGQLSKMFFLFPDPHFKEKNHRRRVISPHLLDEYA 487
            TNPGQYQN+SVVRTNSMKYIPN+FEKGQL+KMFFLFPDPHFKEKNHRRRVISPHLLDEYA
Sbjct: 115  TNPGQYQNVSVVRTNSMKYIPNYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYA 174

Query: 486  YTLESGGIIYTITDVEELGEWMKACLEDHPLFEAISEEEFAADPVVKLLTSATEEGQKVA 307
            Y LE GGIIY+ITDVEELG+WMK CLE+HP+FEA++EEE  ADP VKLL +ATEEGQKVA
Sbjct: 175  YVLEVGGIIYSITDVEELGDWMKTCLENHPMFEALTEEELEADPAVKLLRTATEEGQKVA 234

Query: 306  RNNGETFTAMFRRISPS 256
            RN G+TF A++RRI+PS
Sbjct: 235  RNGGQTFQAVYRRIAPS 251


>ref|XP_002529629.1| tRNA (guanine-n(7)-)-methyltransferase, putative [Ricinus communis]
            gi|223530914|gb|EEF32774.1| tRNA
            (guanine-n(7)-)-methyltransferase, putative [Ricinus
            communis]
          Length = 252

 Score =  414 bits (1065), Expect = e-113
 Identities = 201/257 (78%), Positives = 220/257 (85%)
 Frame = -3

Query: 1026 NKSTGLPRKRFYRARAHSNPLSDSHFPVPLTPSHVDYALHYPQYFQTDHTIADNGDVNNN 847
            NKSTGLPRKRFYRARAHSNPLSDSHFPVP +P  VDY+LHYPQ F     ++        
Sbjct: 11   NKSTGLPRKRFYRARAHSNPLSDSHFPVPFSPCQVDYSLHYPQIFPMSDQVSS------- 63

Query: 846  STASLHKTQSKKIQFADIGCGFGGLIVSLSTLFPETLMIGMEIRDKVTEYVKERILALRE 667
                     SKKIQFAD+GCGFGGL++SLSTLFPETLMIGME+RDKVTEYVKER+LALR 
Sbjct: 64   ---------SKKIQFADVGCGFGGLLISLSTLFPETLMIGMELRDKVTEYVKERVLALRV 114

Query: 666  TNPGQYQNISVVRTNSMKYIPNFFEKGQLSKMFFLFPDPHFKEKNHRRRVISPHLLDEYA 487
             NPGQYQNISVVRTNSMKYIPN+F KGQLSKMFFLFPDPHFKEKNHRRRVISPHLLDEYA
Sbjct: 115  ANPGQYQNISVVRTNSMKYIPNYFGKGQLSKMFFLFPDPHFKEKNHRRRVISPHLLDEYA 174

Query: 486  YTLESGGIIYTITDVEELGEWMKACLEDHPLFEAISEEEFAADPVVKLLTSATEEGQKVA 307
            Y LE GGIIYTITDVEELG+WMK CLE HP+FEA++EEE  ADPVVKLL+SATEEGQKVA
Sbjct: 175  YVLEVGGIIYTITDVEELGDWMKGCLEGHPMFEALTEEELGADPVVKLLSSATEEGQKVA 234

Query: 306  RNNGETFTAMFRRISPS 256
            RN G+TF A++RRI+PS
Sbjct: 235  RNGGQTFQAIYRRIAPS 251


>ref|XP_003523726.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransferase-like [Glycine max]
          Length = 255

 Score =  411 bits (1057), Expect = e-112
 Identities = 205/272 (75%), Positives = 228/272 (83%)
 Frame = -3

Query: 1059 MSENKKVKNKPNKSTGLPRKRFYRARAHSNPLSDSHFPVPLTPSHVDYALHYPQYFQTDH 880
            MSE + V    +KSTGLPRKRFYRARAHSNPLSDSHFPVP++PSHVDY+LHYPQ F    
Sbjct: 1    MSETE-VNPTISKSTGLPRKRFYRARAHSNPLSDSHFPVPISPSHVDYSLHYPQLFPL-- 57

Query: 879  TIADNGDVNNNSTASLHKTQSKKIQFADIGCGFGGLIVSLSTLFPETLMIGMEIRDKVTE 700
                          S     SKKIQFAD+GCGFGGL++SLSTLFPETLMIGME+RDKVTE
Sbjct: 58   --------------SGQADSSKKIQFADVGCGFGGLLISLSTLFPETLMIGMELRDKVTE 103

Query: 699  YVKERILALRETNPGQYQNISVVRTNSMKYIPNFFEKGQLSKMFFLFPDPHFKEKNHRRR 520
            YVKERI +LR  NPGQYQN+SVVRTNSMKYIPN+FEKG LSKMFFLFPDPHFKEKNHRRR
Sbjct: 104  YVKERISSLRVANPGQYQNVSVVRTNSMKYIPNYFEKGTLSKMFFLFPDPHFKEKNHRRR 163

Query: 519  VISPHLLDEYAYTLESGGIIYTITDVEELGEWMKACLEDHPLFEAISEEEFAADPVVKLL 340
            VISP LLDEYAY LE GGIIYTI+DVEELG+WMK+CLE+HP+FEA++E+E  ADPVVKLL
Sbjct: 164  VISPFLLDEYAYVLEVGGIIYTISDVEELGDWMKSCLENHPMFEALTEKELEADPVVKLL 223

Query: 339  TSATEEGQKVARNNGETFTAMFRRISPSDTES 244
            +SATEEGQKVARN G+TF A+FRRI PSD  S
Sbjct: 224  SSATEEGQKVARNEGQTFQAVFRRIVPSDQAS 255


>gb|AFK39576.1| unknown [Lotus japonicus]
          Length = 255

 Score =  407 bits (1045), Expect = e-111
 Identities = 198/261 (75%), Positives = 225/261 (86%)
 Frame = -3

Query: 1026 NKSTGLPRKRFYRARAHSNPLSDSHFPVPLTPSHVDYALHYPQYFQTDHTIADNGDVNNN 847
            ++STGLPRKRFYRARAHSNPLSDSHFPVP++P HVDY+LHYPQ F +    +D  D    
Sbjct: 11   SESTGLPRKRFYRARAHSNPLSDSHFPVPISPRHVDYSLHYPQLFPS----SDRAD---- 62

Query: 846  STASLHKTQSKKIQFADIGCGFGGLIVSLSTLFPETLMIGMEIRDKVTEYVKERILALRE 667
                     S+K+QFADIGCGFGGL++SL+TLFPETLMIGME+RDKV+EYVKERIL+LR 
Sbjct: 63   --------SSRKVQFADIGCGFGGLLISLATLFPETLMIGMELRDKVSEYVKERILSLRV 114

Query: 666  TNPGQYQNISVVRTNSMKYIPNFFEKGQLSKMFFLFPDPHFKEKNHRRRVISPHLLDEYA 487
             NPGQYQN+SVVRTNSMKYIPN+FEKGQLSKMFFLFPDPHFKEKNHRRRVISP LLDEYA
Sbjct: 115  ANPGQYQNVSVVRTNSMKYIPNYFEKGQLSKMFFLFPDPHFKEKNHRRRVISPFLLDEYA 174

Query: 486  YTLESGGIIYTITDVEELGEWMKACLEDHPLFEAISEEEFAADPVVKLLTSATEEGQKVA 307
            YTLE GGII TITDVEELG+WMK+CLE+HP+FE ++E+E  ADPVV LL+SATEEGQKVA
Sbjct: 175  YTLEVGGIICTITDVEELGDWMKSCLENHPMFEPLTEKELEADPVVMLLSSATEEGQKVA 234

Query: 306  RNNGETFTAMFRRISPSDTES 244
            RN G+TF A+FRRI PSD  S
Sbjct: 235  RNGGQTFQAVFRRIVPSDQSS 255


>ref|XP_002332118.1| predicted protein [Populus trichocarpa] gi|222874938|gb|EEF12069.1|
            predicted protein [Populus trichocarpa]
          Length = 252

 Score =  407 bits (1045), Expect = e-111
 Identities = 197/257 (76%), Positives = 221/257 (85%)
 Frame = -3

Query: 1026 NKSTGLPRKRFYRARAHSNPLSDSHFPVPLTPSHVDYALHYPQYFQTDHTIADNGDVNNN 847
            +KSTGLPRKRFYRARAHSNPLSDSHFPVP++PSHVD++LHYPQ+F               
Sbjct: 11   SKSTGLPRKRFYRARAHSNPLSDSHFPVPISPSHVDFSLHYPQFF--------------- 55

Query: 846  STASLHKTQSKKIQFADIGCGFGGLIVSLSTLFPETLMIGMEIRDKVTEYVKERILALRE 667
             + S      K +QFADIGCGFGGL+VSLSTLFPETLMIGME+RDKV EYVKERILALR 
Sbjct: 56   -SLSCEVGCIKMVQFADIGCGFGGLLVSLSTLFPETLMIGMELRDKVAEYVKERILALRT 114

Query: 666  TNPGQYQNISVVRTNSMKYIPNFFEKGQLSKMFFLFPDPHFKEKNHRRRVISPHLLDEYA 487
            TNPGQYQN+SVVRTNSMKY+PN+FEKGQL+KMFFLFPDPHFKEKNHRRRVISPHLLDEYA
Sbjct: 115  TNPGQYQNVSVVRTNSMKYLPNYFEKGQLTKMFFLFPDPHFKEKNHRRRVISPHLLDEYA 174

Query: 486  YTLESGGIIYTITDVEELGEWMKACLEDHPLFEAISEEEFAADPVVKLLTSATEEGQKVA 307
            Y LE GGIIYTITDVEELGEWMK CL++HP+FEA++EEE  ADP VKLL +ATEEGQKVA
Sbjct: 175  YVLEVGGIIYTITDVEELGEWMKTCLDNHPMFEALTEEELQADPAVKLLCTATEEGQKVA 234

Query: 306  RNNGETFTAMFRRISPS 256
            RN G+TF A++RRI+ S
Sbjct: 235  RNGGQTFQAVYRRIALS 251


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