BLASTX nr result

ID: Coptis25_contig00005802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005802
         (1471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315662.1| predicted protein [Populus trichocarpa] gi|2...   275   3e-71
gb|ABG37640.1| ATP-binding protein [Populus trichocarpa]              271   4e-70
ref|XP_003524253.1| PREDICTED: uncharacterized protein LOC100792...   270   5e-70
ref|XP_002282396.1| PREDICTED: uncharacterized protein LOC100249...   264   5e-68
gb|AAG28912.1|AC008113_28 F12A21.3 [Arabidopsis thaliana]             262   1e-67

>ref|XP_002315662.1| predicted protein [Populus trichocarpa] gi|222864702|gb|EEF01833.1|
            predicted protein [Populus trichocarpa]
          Length = 473

 Score =  275 bits (702), Expect = 3e-71
 Identities = 150/255 (58%), Positives = 178/255 (69%)
 Frame = -2

Query: 1128 ENLRYRLQPPREFYSFKKANILRYNEETLRKTNYSTYGHPGTRRSQLFDNIIDGSYADKT 949
            +++R  LQ  ++     KANI+RYNEETL K + S Y HP + RSQL ++ ++ S +DK 
Sbjct: 207  DSVRDALQELQDAVYLTKANIVRYNEETLMKIHNSAYAHPESMRSQLPEDFLNDS-SDKL 265

Query: 948  KDLRQALPLCSKANDXXXXXXXXXXXXLRQHTIRLCGVSXXXXXXXXXAGPLAQKLDRTI 769
            +   +   L   + D            L+QH IR C VS         A PLA K  R +
Sbjct: 266  QTPGKPRFLNPASKDMEMPMPPLALSPLQQHGIRPCNVSEVLSDLVEAAIPLANKQQRIL 325

Query: 768  ELSEISLSLEVAVEESALRQALSNLIEGALLRTHVGGKVDIISTEAPAGGVLVVIDDDGP 589
            EL E+S SL+VA+EE ALRQALSNLIEGALLRTHVGGKV+I+ST APAGG LVVIDDDGP
Sbjct: 326  ELGELSQSLQVAIEEPALRQALSNLIEGALLRTHVGGKVEIVSTGAPAGGALVVIDDDGP 385

Query: 588  DMHYMTQMHSLTPFGADLLSDGKVEDNMTWNFVSGLTVAREILESYGCIVRVISPRTQDA 409
            DMHYMTQM SL PFGA+L S+  VEDNMTWNFV+GLTVAREILE+YGC+VRVISPR  DA
Sbjct: 386  DMHYMTQMRSLIPFGAELFSENMVEDNMTWNFVAGLTVAREILENYGCVVRVISPRVSDA 445

Query: 408  VFGAVGTRIELWFPS 364
              G  GTRIELW PS
Sbjct: 446  ALGTGGTRIELWLPS 460


>gb|ABG37640.1| ATP-binding protein [Populus trichocarpa]
          Length = 771

 Score =  271 bits (692), Expect = 4e-70
 Identities = 146/239 (61%), Positives = 171/239 (71%)
 Frame = -2

Query: 1080 KKANILRYNEETLRKTNYSTYGHPGTRRSQLFDNIIDGSYADKTKDLRQALPLCSKANDX 901
            ++ANI+RYNEETL K + S Y HP + RSQL ++ ++ S +DK +   +   L   + D 
Sbjct: 521  EQANIVRYNEETLMKIHNSAYAHPESMRSQLPEDFLNDS-SDKLQTPGKPRFLNPASKDM 579

Query: 900  XXXXXXXXXXXLRQHTIRLCGVSXXXXXXXXXAGPLAQKLDRTIELSEISLSLEVAVEES 721
                       L+QH IR C VS         A PLA K  R +EL E+S SL+VA+EE 
Sbjct: 580  EMPMPPLALSPLQQHGIRPCNVSEVLSDLVEAAIPLANKQQRILELGELSQSLQVAIEEP 639

Query: 720  ALRQALSNLIEGALLRTHVGGKVDIISTEAPAGGVLVVIDDDGPDMHYMTQMHSLTPFGA 541
            ALRQALSNLIEGALLRTHVGGKV+I+ST APAGG LVVIDDDGPDMHYMTQM SL PFGA
Sbjct: 640  ALRQALSNLIEGALLRTHVGGKVEIVSTGAPAGGALVVIDDDGPDMHYMTQMRSLIPFGA 699

Query: 540  DLLSDGKVEDNMTWNFVSGLTVAREILESYGCIVRVISPRTQDAVFGAVGTRIELWFPS 364
            +L S+  VEDNMTWNFV+GLTVAREILE+YGC+VRVISPR  DA  G  GTRIELW PS
Sbjct: 700  ELFSENMVEDNMTWNFVAGLTVAREILENYGCVVRVISPRVSDAALGTGGTRIELWLPS 758


>ref|XP_003524253.1| PREDICTED: uncharacterized protein LOC100792515 [Glycine max]
          Length = 612

 Score =  270 bits (691), Expect = 5e-70
 Identities = 151/270 (55%), Positives = 180/270 (66%), Gaps = 1/270 (0%)
 Frame = -2

Query: 1128 ENLRYRLQPPREFYSFKKANILRYNEETLRKTNYSTYGHPGTRRSQLFDNIIDGSYADKT 949
            + LR  LQ  ++     K NI+RYNEE ++K N ST+    + RSQL D+      A+K 
Sbjct: 344  DRLRDVLQQLQDAVYLTKTNIVRYNEEAIKKMNGSTHILAESSRSQLLDSSPGDVSANKM 403

Query: 948  KDLRQALPLCSKANDXXXXXXXXXXXXLRQHTIRLCGVSXXXXXXXXXAGPLAQKLDRTI 769
            K   ++L L +   D            L QH IR C VS           PLAQ   R +
Sbjct: 404  KKSSESLSLSAAVQDIEMPLPPLALAPL-QHGIRSCNVSEVLADLVDSVRPLAQGQKRVV 462

Query: 768  ELSEISLS-LEVAVEESALRQALSNLIEGALLRTHVGGKVDIISTEAPAGGVLVVIDDDG 592
            ELSE+S S L  AVEE ALRQA SNLIEGALLRTHVGGKV+I+ST APAGG LV+IDDDG
Sbjct: 463  ELSELSSSPLLAAVEEPALRQAFSNLIEGALLRTHVGGKVEIVSTAAPAGGTLVLIDDDG 522

Query: 591  PDMHYMTQMHSLTPFGADLLSDGKVEDNMTWNFVSGLTVAREILESYGCIVRVISPRTQD 412
            PDMHYMTQMHSLTP+G +LLSD  +EDNMTWNFV+GLTVAREILESYGC+VR++SPR +D
Sbjct: 523  PDMHYMTQMHSLTPYGQELLSDNMIEDNMTWNFVAGLTVAREILESYGCVVRIVSPRIKD 582

Query: 411  AVFGAVGTRIELWFPSHSLTSDPSGRTEVV 322
            A  GA GTR+ELW PS  + SD S   + V
Sbjct: 583  APLGAGGTRVELWLPSSIVQSDLSSHAQEV 612


>ref|XP_002282396.1| PREDICTED: uncharacterized protein LOC100249068 [Vitis vinifera]
            gi|296081359|emb|CBI16792.3| unnamed protein product
            [Vitis vinifera]
          Length = 627

 Score =  264 bits (674), Expect = 5e-68
 Identities = 146/261 (55%), Positives = 172/261 (65%)
 Frame = -2

Query: 1128 ENLRYRLQPPREFYSFKKANILRYNEETLRKTNYSTYGHPGTRRSQLFDNIIDGSYADKT 949
            + +R  LQ  ++     KANI+RYNEETL+K   STY H  +  +QL DN    + + K 
Sbjct: 364  DRMRDALQQLQDAVHLTKANIVRYNEETLKKMYKSTYAHADSV-NQLSDNFWRETSSSKA 422

Query: 948  KDLRQALPLCSKANDXXXXXXXXXXXXLRQHTIRLCGVSXXXXXXXXXAGPLAQKLDRTI 769
            ++  + L L S AND            + QH IR C V            PLA K  R +
Sbjct: 423  EESGEPLSLTSAANDLDMPTPPLALARVSQHGIRPCNVYDILADLVGAVKPLAHKQQREV 482

Query: 768  ELSEISLSLEVAVEESALRQALSNLIEGALLRTHVGGKVDIISTEAPAGGVLVVIDDDGP 589
            EL   S +L+VAVEE ALRQALSNLIEGALLRT VGGKV+I+ST  PAGG  VVIDDDGP
Sbjct: 483  ELIGRSQTLQVAVEEPALRQALSNLIEGALLRTRVGGKVEILSTGTPAGGAFVVIDDDGP 542

Query: 588  DMHYMTQMHSLTPFGADLLSDGKVEDNMTWNFVSGLTVAREILESYGCIVRVISPRTQDA 409
            DMHYMTQMHSLTPFGADL SD  +EDNMTWNFV+GLTVA EILESYGC+V VISPR+ DA
Sbjct: 543  DMHYMTQMHSLTPFGADLFSDNMLEDNMTWNFVAGLTVACEILESYGCVVHVISPRSTDA 602

Query: 408  VFGAVGTRIELWFPSHSLTSD 346
              GA GTR+++  PS    SD
Sbjct: 603  ALGAGGTRVKILLPSLDAASD 623


>gb|AAG28912.1|AC008113_28 F12A21.3 [Arabidopsis thaliana]
          Length = 610

 Score =  262 bits (670), Expect = 1e-67
 Identities = 146/256 (57%), Positives = 175/256 (68%), Gaps = 1/256 (0%)
 Frame = -2

Query: 1128 ENLRYRLQPPREFYSFKKANILRYNEETLRKTNYSTYGHPGTRRSQL-FDNIIDGSYADK 952
            + ++  L+  ++     KANI+R+NEE L+K N +   H  TRRS+    + IDGS    
Sbjct: 352  DQIKDTLEELQDAVHLTKANIVRHNEEALKKINKT---HNETRRSKYEHKDPIDGSQISS 408

Query: 951  TKDLRQALPLCSKANDXXXXXXXXXXXXLRQHTIRLCGVSXXXXXXXXXAGPLAQKLDRT 772
            T+     L L S  +D            L+ H+IR C +S           PLA    R 
Sbjct: 409  TR-----LSLGSGLDDSEMPMPPLALAPLQMHSIRPCDISNVLLDMVETVRPLALTQQRV 463

Query: 771  IELSEISLSLEVAVEESALRQALSNLIEGALLRTHVGGKVDIISTEAPAGGVLVVIDDDG 592
            +EL E S SL+VAVEE ALRQALSNLIEGALLRTHVGGKV+I+ST APAGG LVVIDDDG
Sbjct: 464  VELGENSASLQVAVEEPALRQALSNLIEGALLRTHVGGKVEILSTRAPAGGSLVVIDDDG 523

Query: 591  PDMHYMTQMHSLTPFGADLLSDGKVEDNMTWNFVSGLTVAREILESYGCIVRVISPRTQD 412
            PDM YMTQMHSLTPFGA+LLS+  VEDNMTWNFV+GLTVAREILESYGC++RVISPR+ D
Sbjct: 524  PDMRYMTQMHSLTPFGAELLSENMVEDNMTWNFVAGLTVAREILESYGCVIRVISPRSSD 583

Query: 411  AVFGAVGTRIELWFPS 364
            A  GA GTR+ELW P+
Sbjct: 584  AALGAGGTRVELWLPA 599


Top