BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005801
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glyc...   163   2e-38
ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic su...   163   2e-38
ref|XP_002307042.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38
ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic su...   155   2e-36
ref|NP_001067405.1| Os11g0186400 [Oryza sativa Japonica Group] g...   155   2e-36

>ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glycine max]
           gi|3913525|sp|O48901.1|DPOD1_SOYBN RecName: Full=DNA
           polymerase delta catalytic subunit
           gi|2895198|gb|AAC18443.1| DNA polymerase delta [Glycine
           max]
          Length = 1088

 Score =  163 bits (412), Expect = 2e-38
 Identities = 76/86 (88%), Positives = 80/86 (93%)
 Frame = -1

Query: 260 EFDCLYSELISHAPEGEFSKMAPFRILSFDIECTGRKGHFAEPTHDPVIQVANLVTLQGE 81
           EFDCLYSELISHAPEGE+SKMAPFRILSFDIEC GRKGHF EPTHDPVIQ+ANLVTLQGE
Sbjct: 248 EFDCLYSELISHAPEGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTLQGE 307

Query: 80  SQPFVRNIMTLKSYSPIVGADVMSFE 3
            QPF+RN+MTLKS SPIVG DVM FE
Sbjct: 308 DQPFIRNVMTLKSCSPIVGVDVMPFE 333


>ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
           gi|296088521|emb|CBI37512.3| unnamed protein product
           [Vitis vinifera]
          Length = 1089

 Score =  163 bits (412), Expect = 2e-38
 Identities = 78/86 (90%), Positives = 79/86 (91%)
 Frame = -1

Query: 260 EFDCLYSELISHAPEGEFSKMAPFRILSFDIECTGRKGHFAEPTHDPVIQVANLVTLQGE 81
           EFDCLYSEL SH PEGEFSKMAPFRILSFDIEC GRKGHF EPTHDPVIQVANLVTLQGE
Sbjct: 275 EFDCLYSELTSHIPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGE 334

Query: 80  SQPFVRNIMTLKSYSPIVGADVMSFE 3
            QPFVRN+MTLKS SPIVG DVMSFE
Sbjct: 335 DQPFVRNVMTLKSCSPIVGVDVMSFE 360


>ref|XP_002307042.1| predicted protein [Populus trichocarpa] gi|222856491|gb|EEE94038.1|
           predicted protein [Populus trichocarpa]
          Length = 1081

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/86 (90%), Positives = 79/86 (91%)
 Frame = -1

Query: 260 EFDCLYSELISHAPEGEFSKMAPFRILSFDIECTGRKGHFAEPTHDPVIQVANLVTLQGE 81
           EFDCLYSELISHA EGEFSKMAPFRILSFDIEC GRKGHF EPTHDPVIQVANLVTLQGE
Sbjct: 267 EFDCLYSELISHAAEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGE 326

Query: 80  SQPFVRNIMTLKSYSPIVGADVMSFE 3
            QPFVRNIMTL S SPIVG DVMSF+
Sbjct: 327 DQPFVRNIMTLNSCSPIVGVDVMSFD 352


>ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cucumis
           sativus]
          Length = 1086

 Score =  155 bits (393), Expect = 2e-36
 Identities = 73/86 (84%), Positives = 78/86 (90%)
 Frame = -1

Query: 260 EFDCLYSELISHAPEGEFSKMAPFRILSFDIECTGRKGHFAEPTHDPVIQVANLVTLQGE 81
           EFDCLYS+LISHAPEGEFSKMAPFRILSFDIEC GRKGHF EPT DPVIQVANLVTLQGE
Sbjct: 272 EFDCLYSDLISHAPEGEFSKMAPFRILSFDIECAGRKGHFPEPTQDPVIQVANLVTLQGE 331

Query: 80  SQPFVRNIMTLKSYSPIVGADVMSFE 3
            QPFVRN+MTL + SPI G DV+SF+
Sbjct: 332 DQPFVRNVMTLNTCSPIAGVDVLSFD 357


>ref|NP_001067405.1| Os11g0186400 [Oryza sativa Japonica Group]
           gi|13124219|sp|Q9LRE6.1|DPOD1_ORYSJ RecName: Full=DNA
           polymerase delta catalytic subunit
           gi|9188570|dbj|BAA99573.1| OsPol delta large subunit
           [Oryza sativa Japonica Group] gi|62734232|gb|AAX96341.1|
           dna polymerase delta catalytic subunit (ec 2.7.7.7)
           [Oryza sativa Japonica Group] gi|77549018|gb|ABA91815.1|
           DNA polymerase delta catalytic subunit, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113644627|dbj|BAF27768.1| Os11g0186400 [Oryza sativa
           Japonica Group]
          Length = 1105

 Score =  155 bits (393), Expect = 2e-36
 Identities = 73/86 (84%), Positives = 78/86 (90%)
 Frame = -1

Query: 260 EFDCLYSELISHAPEGEFSKMAPFRILSFDIECTGRKGHFAEPTHDPVIQVANLVTLQGE 81
           E DCLYS+L+SHA EGE SKMAPFRILSFDIEC GRKGHF EPTHDPVIQ+ANLVTLQGE
Sbjct: 291 ELDCLYSDLVSHAAEGEHSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTLQGE 350

Query: 80  SQPFVRNIMTLKSYSPIVGADVMSFE 3
            QPFVRN+MTLKS SPIVG DVMSF+
Sbjct: 351 GQPFVRNVMTLKSCSPIVGVDVMSFD 376