BLASTX nr result
ID: Coptis25_contig00005798
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00005798 (4180 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263312.1| PREDICTED: uncharacterized protein LOC100261... 464 e-128 ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-... 281 e-122 ref|XP_001771487.1| predicted protein [Physcomitrella patens sub... 427 e-116 ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|2... 274 e-111 ref|XP_002283115.1| PREDICTED: uncharacterized protein LOC100267... 410 e-111 >ref|XP_002263312.1| PREDICTED: uncharacterized protein LOC100261746 [Vitis vinifera] Length = 751 Score = 464 bits (1194), Expect = e-128 Identities = 294/709 (41%), Positives = 379/709 (53%), Gaps = 63/709 (8%) Frame = +3 Query: 489 EDEEVQVEPSPILQSSREAEGKPSEGPF------HASRLPFDADSNDTESQLKSVPNDSD 650 E EE +++ L + + +P E P S+ D+D ++ E++L+++ Sbjct: 47 ESEEWELDEFVSLSHYNDEKEQPIEDPDMDSLGKSVSKSSSDSDPDEAEARLEAISRSLI 106 Query: 651 EKKRLLN------AKDGDHRLTKKLK------LESDGGSA-----------------GNA 743 E K L+ A D + KK K LE+D GS + Sbjct: 107 ENKGSLDVIANEPAPLQDFQTLKKCKQDESSNLEADVGSVVADLHDKSGVPMAPVTDEST 166 Query: 744 SEQQEHTGSSGKRRRSRWDPQPDCNVEGGDGDRTSKRRKSRWAADDANLRILGPIQLPDF 923 SE+QEH GSSGKRR SR D +P+ + E +G+RT KRRK+RW DD+ L+ILGPIQLP F Sbjct: 167 SEKQEHAGSSGKRRLSRRDQKPEVDGETDEGNRTRKRRKTRWTGDDSQLKILGPIQLPSF 226 Query: 924 VKKLVEADLDPEIQELWKELSGINKILQRAEVNDDXXXXXXXXXXXXVYDDSRIRINSRD 1103 VK V +DLDPEIQEL EL IN LQR E++DD VYD R N+R+ Sbjct: 227 VKDFVTSDLDPEIQELKVELFEINSKLQRPELHDDRPKEDRSPSPEPVYDYLGNRKNTRE 286 Query: 1104 ARFREKLVRDRQTIIAKLIEKNPTFXXXXXXXXXXXXXXXXXXVKEYPGYNFVGLIIGPR 1283 R REKL++ RQ II++LIEKN TF KEYP YNFVGLIIGPR Sbjct: 287 VRLREKLIKKRQCIISRLIEKNSTFKPAADYKPPKLIKKLYIPEKEYPDYNFVGLIIGPR 346 Query: 1284 GLTQKRMQNETGASIKLRGKGSILEGKAKQKYDPSDNDELHVLVEADDQKSLDDAIRMVE 1463 G TQKRM+ ETGA I LRGKG L K ++ SDN++LHV +EAD+Q S D A+RMVE Sbjct: 347 GNTQKRMEKETGAKILLRGKGYSL--KTPRRTKASDNEDLHVRIEADNQNSFDAAVRMVE 404 Query: 1464 KLLIPVAEGMNEHKRAQLRELAQL----SENQCKTCGVEGHMSYACPNWSSVVNSALTCD 1631 KLLIP+ G+N H++AQL EL +L ++N C+ C EGH YACP+ S S+L+CD Sbjct: 405 KLLIPIDRGINAHQQAQLVELGKLNGERNKNMCRCCYDEGHPHYACPHLQSTFQSSLSCD 464 Query: 1632 TCGSSSHSTANCPLTMSTPGSNFADQHQTFLADLGGSGGFTFSTPNHSSCIPWQGGNSEF 1811 CGS++H+T +CPL S+ GSN L GS G Sbjct: 465 ICGSNNHATPSCPLIASSQGSN----------SLWGSSGLEI------------------ 496 Query: 1812 GISPSCSSNSHSGRGLTPTTDNKSSKEVDDANLFVGYLPYNVDDDRLRELFSPFGRLIEA 1991 G TP T +K +KE DA+L+VGYLP +D++ L ELF+PFG++ + Sbjct: 497 --------------GSTPDTQSKPNKETSDADLYVGYLPQTMDENCLAELFAPFGKIAKT 542 Query: 1992 KVIKDRSTGSSKGYGFVKYDNPTNAAMAVGRMNGYKIDRKTLAVRVRGEPPSAVRSSTNL 2171 KVIKDR+TG SKGYGFVK++NP +AA+A+ M+GYKID KTLAVR S + Sbjct: 543 KVIKDRATGISKGYGFVKFENPAHAALALSHMHGYKIDGKTLAVREGTRQWVTGSSVLSP 602 Query: 2172 LPKYPGPAMLSQDNPSLASWPGPPGSMLPDPQ--FSST--------------------KS 2285 P +PG SQD +P PPGS+LP Q F T KS Sbjct: 603 DPNHPGSIAASQDAVRQTGFPVPPGSLLPQHQTMFPETKRMALPPPATYHLGPFDFFPKS 662 Query: 2286 NSLGLP--YXXXXXXXXXXXXXXXXXRHIPFPSPNSLTQFPGYPGPPGS 2426 LG P +PF SP+SL QFPG P PGS Sbjct: 663 KGLGFPPVSSILNSQGRSGFEYGYIATQVPFSSPSSLLQFPGDPSYPGS 711 >ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera] Length = 1137 Score = 281 bits (718), Expect(3) = e-122 Identities = 155/280 (55%), Positives = 194/280 (69%), Gaps = 14/280 (5%) Frame = +3 Query: 2763 AIKSHGNNKVKAF-----GIV*ESYFRSGRRYGWLWW*TRCGGFSNYLICVVEKGVGIMI 2927 AIK+HG+NK+ F + ++ + G CG ++NYL+CVVEKG+ + Sbjct: 198 AIKAHGSNKLGPFCRGLSALYTKATLEAAEEVGG--GEEECGSYNNYLVCVVEKGISVEN 255 Query: 2928 KN---VVWKVDLM*GL---GLSTGDVVYGEFNDNVMRMALEGVVLSLCPPEVLLGEPLSK 3089 V D+ G+ +STGDVV+GEFNDN MR LE V+LS+ P E+LLG PLSK Sbjct: 256 SKDCGVGGGFDVRIGIVAVEVSTGDVVHGEFNDNFMRAGLEAVILSMSPAELLLGYPLSK 315 Query: 3090 QTEKMLLSYAGPTSSVRVEHASRGCSKDSDALAEVLLLYETMGGDSSINAQEHDIDNTV- 3266 QTEK+LL+YAGP S+VRVE SR C D ALAEV+ LYE + +S +H +DNT Sbjct: 316 QTEKLLLAYAGPASNVRVERTSRDCFSDGGALAEVMSLYENLSENSRA---DHQVDNTEV 372 Query: 3267 --QDKHLLGVEGIMTMPGLAVQALALIMRHLKQFGFERIMCLCSTLCPFYSNIEMTLSAN 3440 Q+ H L +EGIM+MP LAVQALAL +RHLKQFG ERI+C+ ++ PF SN+EMTLSAN Sbjct: 373 MEQENHCLAIEGIMSMPDLAVQALALTIRHLKQFGLERILCMGASFRPFSSNMEMTLSAN 432 Query: 3441 TLQQLEVSRNNSDGSETGSLLHAMNHTLTIFGSRLLKHWV 3560 LQQLEV N+SDGSE+GSLLH MNHTLTIFGSRLL+HWV Sbjct: 433 ALQQLEVLNNHSDGSESGSLLHTMNHTLTIFGSRLLRHWV 472 Score = 114 bits (284), Expect(3) = e-122 Identities = 64/112 (57%), Positives = 80/112 (71%), Gaps = 1/112 (0%) Frame = +2 Query: 3584 ISARLDAVSEIEESMAP-STKQDGGSIDNEDECVAHVKPLINDVLSSVLTTLGISTDIQR 3760 ISARLDAVSEI SM Q+ G ID D V +V+P +N +LSSVLTTLG S DIQR Sbjct: 482 ISARLDAVSEIVMSMGSCKASQNFGGIDEGDSDVTYVQPEVNYLLSSVLTTLGRSPDIQR 541 Query: 3761 GITRIFHRTATTFEFIAVVHTILYARKQLQQLQVEHKDSNEELQKKTAFSLI 3916 G+TRIFHRTAT EFI+V IL+A KQLQ+L +E KD +E+ Q ++ S++ Sbjct: 542 GLTRIFHRTATASEFISVTQAILFAGKQLQRLHIEEKDVDEKGQSRSVRSVL 593 Score = 97.1 bits (240), Expect(3) = e-122 Identities = 48/82 (58%), Positives = 63/82 (76%) Frame = +3 Query: 3933 TASSPTVVNHVAKLLSLHNKDAADQKDLQNLFIASDGQFPEVARSQTTVEVANHKLDSLI 4112 TASS ++ + AKLLS NK+AAD+ DL NLFI S GQFPEVA++++ V+ A KLD LI Sbjct: 600 TASSSGIIGNAAKLLSTLNKEAADKGDLPNLFIISSGQFPEVAKARSLVQSAKEKLDLLI 659 Query: 4113 SMYRKQLGVRNLDFIGVSGSTH 4178 +YRKQL + NL+F+ VSG+TH Sbjct: 660 GLYRKQLRMNNLEFMSVSGTTH 681 >ref|XP_001771487.1| predicted protein [Physcomitrella patens subsp. patens] gi|162677214|gb|EDQ63687.1| predicted protein [Physcomitrella patens subsp. patens] Length = 774 Score = 427 bits (1097), Expect = e-116 Identities = 261/565 (46%), Positives = 332/565 (58%), Gaps = 29/565 (5%) Frame = +3 Query: 669 NAKDGDHRLTKKLKLE--SDGGSAGNASEQQEHTGSSGKRRRSRWDPQPDCNVEGGDGDR 842 NA +G++ + + E SDG S NAS + GSSGK+RRSRW PQ + EG D + Sbjct: 42 NAVEGENGGARGVNGEGGSDGNSDQNASAGVD--GSSGKKRRSRWGPQ-EGEGEGNDAEG 98 Query: 843 TS-KRRKSRWAADDANLRILGPIQLPDFVKKLVEA-DLDPEIQELWKELSGINKILQRAE 1016 + K+RKSRWAA++ NL +LG IQLPDFVK+L DLDPE+Q L +L IN+ LQ Sbjct: 99 SGGKKRKSRWAAEEPNLPLLGQIQLPDFVKELTGGVDLDPELQALNIKLLDINRKLQTGM 158 Query: 1017 VNDDXXXXXXXXXXXXVYDDSRIRINSRDARFREKLVRDRQTIIAKLIEKNPTFXXXXXX 1196 V D +YD+ IRIN+R+ R REKL R+RQ +IA LI+KNP F Sbjct: 159 VLDPVGDGNRSPSPEPIYDNMGIRINTREYRAREKLTRERQEVIAMLIKKNPAFKPPADY 218 Query: 1197 XXXXXXXXXXXXVKEYPGYNFVGLIIGPRGLTQKRMQNETGASIKLRGKGSILEGKAKQK 1376 VKEYPGYNF+GL+IGPRG TQKRM+ ETGA I +RGKGS+ EG++ QK Sbjct: 219 KPLKHYKKLYIPVKEYPGYNFIGLVIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRSAQK 278 Query: 1377 YD----PSDNDELHVLVEADDQKSLDDAIRMVEKLLIPVAEGMNEHKRAQLRELAQLS-- 1538 D PS+N++LHVLVEAD + +L+ A MVEKLL+PV EG NEHKRAQLRELA L+ Sbjct: 279 RDLKPDPSENEDLHVLVEADTEDALEKAAGMVEKLLVPVEEGRNEHKRAQLRELAALNGT 338 Query: 1539 ---ENQCKTCGVEGHMSYACPNWSSVVNSALTCDTCGSSSHSTANCPLTMSTPGSNFADQ 1709 + C+ CG GH YACP S S ++C CG H T +CPL S G+ D+ Sbjct: 339 IRDDEYCRLCGEPGHRQYACPARHSTFKSDVSCRICGDGGHPTIDCPLKGSAQGNKMDDE 398 Query: 1710 HQTFLADLGGS-------GGFTFSTPNH--SSCIPWQGGNSEFGISPSCSSNSHSGRGLT 1862 ++ FLA+LGG G T + P S +PW GG + G + S SG G Sbjct: 399 YKNFLAELGGGEVGSARQSGPTLALPGPQGSPSLPWAGGTT--GGAAMGSGGGRSGPG-- 454 Query: 1863 PTTDNKSSKEVDDANLFVGYLPYNVDDDRLRELFSPFGRLIEAKVIKDRSTGSSKGYGFV 2042 DDANL+VGYLP +VDD+ L LF+PFG + AKVI+DR TG+SKGYGFV Sbjct: 455 ----GPGLGADDDANLYVGYLPSSVDDEGLARLFAPFGAVEHAKVIRDRLTGASKGYGFV 510 Query: 2043 KYDNPTNAAMAVGRMNGYKIDRKTLAVRVRG--EPPSAVRSSTNLLPKYPGPAMLSQDNP 2216 K+ +P++A AV NGY+++ + LAVRV G PP V P+ P P Sbjct: 511 KFSDPSSATAAVTHRNGYRLEGRVLAVRVAGPAPPPRGVGGGNGGPPQNGDPMGGGGYAP 570 Query: 2217 SLASW---PGPPGS--MLPDPQFSS 2276 L S GPPG M P P +S Sbjct: 571 QLPSGGPPRGPPGGGHMTPPPWATS 595 >ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|222869461|gb|EEF06592.1| predicted protein [Populus trichocarpa] Length = 1092 Score = 274 bits (700), Expect(3) = e-111 Identities = 150/272 (55%), Positives = 190/272 (69%), Gaps = 6/272 (2%) Frame = +3 Query: 2763 AIKSHGNNKVKAF-----GIV*ESYFRSGRRYGWLWW*TRCGGFSNYLICVVEKGVGIMI 2927 AIK+HG NK F + ++ + G CGG SNYL CVVEKG+ + Sbjct: 178 AIKAHGENKSGPFCRGLSALYTKATLEAAENVGGEE--EECGGESNYLCCVVEKGLDCGV 235 Query: 2928 KNVVWKVDL-M*GLGLSTGDVVYGEFNDNVMRMALEGVVLSLCPPEVLLGEPLSKQTEKM 3104 + V+ V + + + +STGDVVYGEFND MR LE VLSL P E+LLG+PLSKQTEK+ Sbjct: 236 EGGVFDVRVGVVAVEISTGDVVYGEFNDGFMRSGLEAFVLSLAPAELLLGDPLSKQTEKL 295 Query: 3105 LLSYAGPTSSVRVEHASRGCSKDSDALAEVLLLYETMGGDSSINAQEHDIDNTVQDKHLL 3284 LL+Y+GP+S+VRVE SR C D ALA+V+ LYE M D+ + ++ D Q L Sbjct: 296 LLAYSGPSSNVRVERVSRDCFSDGGALADVMSLYENMIEDNLGDNEKQMTDAKEQGSCHL 355 Query: 3285 GVEGIMTMPGLAVQALALIMRHLKQFGFERIMCLCSTLCPFYSNIEMTLSANTLQQLEVS 3464 +EG++ MP LAV+ALAL +RHLKQFGF+R++CL ++ PF SN+EM LSANTLQQLEV Sbjct: 356 AIEGVIKMPDLAVEALALTVRHLKQFGFDRMLCLGASFRPFSSNMEMNLSANTLQQLEVL 415 Query: 3465 RNNSDGSETGSLLHAMNHTLTIFGSRLLKHWV 3560 RNNSDGSE+GSLLH MNHTLTI+GSRLL+HWV Sbjct: 416 RNNSDGSESGSLLHIMNHTLTIYGSRLLRHWV 447 Score = 99.8 bits (247), Expect(3) = e-111 Identities = 51/81 (62%), Positives = 63/81 (77%) Frame = +3 Query: 3936 ASSPTVVNHVAKLLSLHNKDAADQKDLQNLFIASDGQFPEVARSQTTVEVANHKLDSLIS 4115 ASS +VV + AKLLS NK+AA+Q DL NL I SD QFPEVAR++ V+ A KLDSLI Sbjct: 603 ASSSSVVGNAAKLLSTLNKEAAEQGDLTNLIIISDDQFPEVARAREAVQFAKEKLDSLIG 662 Query: 4116 MYRKQLGVRNLDFIGVSGSTH 4178 +YRKQL +RNL+F+ VSG+TH Sbjct: 663 LYRKQLQMRNLEFMSVSGTTH 683 Score = 80.9 bits (198), Expect(3) = e-111 Identities = 59/141 (41%), Positives = 76/141 (53%), Gaps = 28/141 (19%) Frame = +2 Query: 3584 ISARLDAVSEIEESMAPST-KQDGGSIDNEDECVAHVKPLINDVLSSVLTTLGISTDIQR 3760 ISARLDAVSEI E M S Q +D +D VA V+P + +LS+VLT LG S DI+R Sbjct: 457 ISARLDAVSEIAECMGFSKDSQRVSELDEDDSEVAIVQPDLYYLLSAVLTALGRSPDIER 516 Query: 3761 GITRIFHRTATTFE---------------------------FIAVVHTILYARKQLQQLQ 3859 GITRIFHRTAT E FIAV IL A KQL++L Sbjct: 517 GITRIFHRTATASEFLLMFLIMYLTYLSSFSSPIAVLVWLWFIAVFQAILAAGKQLKRLC 576 Query: 3860 VEHKDSNEELQKKTAFSLIEK 3922 ++ + + + + KT S++ K Sbjct: 577 IQEEHNYDGVGSKTVKSVLLK 597 >ref|XP_002283115.1| PREDICTED: uncharacterized protein LOC100267539 [Vitis vinifera] Length = 794 Score = 410 bits (1053), Expect = e-111 Identities = 288/795 (36%), Positives = 401/795 (50%), Gaps = 37/795 (4%) Frame = +3 Query: 513 PSPILQSSREAEGKPSEGPFHASRLPFDADSNDTESQLKSVPNDSDEKKRLLNAKDGDHR 692 PSP QS + PS+ AS P N L S N+ +G Sbjct: 29 PSPPSQSLDSSFQNPSKTL--ASDHPDSISPNSDSQNLASFSNNGQTHF------EGPKF 80 Query: 693 LTKKLKLESDGGSAGNASEQQEHTG-----SSGKRRRSRWDPQPDC-NVEGGDGDRTS-- 848 +K + +G + + ++++G +S +RRRSRWDP D N G+ + Sbjct: 81 DLQKPLVSENGVTNTQSGTDKDYSGGEEETTSRRRRRSRWDPPSDSGNQTAGEAAEGTGA 140 Query: 849 KRRKSRWAADDANLRILGPIQLPDFVKKLVEA-DLDPEIQELWKELSGINKILQRAEVND 1025 ++RKSRWA D+ I QLPDF+K + DPEIQ L L I+++LQ D Sbjct: 141 RKRKSRWADDEPKPLI----QLPDFMKDFTGGIEFDPEIQALNSRLLEISRMLQSGLPLD 196 Query: 1026 DXXXXXXXXXXXXVYDDSRIRINSRDARFREKLVRDRQTIIAKLIEKNPTFXXXXXXXXX 1205 D +YD+ IRIN+R+ R RE+L R+RQ II++++++NP F Sbjct: 197 DRPEGARSPSPEPIYDNMGIRINTREYRARERLNRERQEIISQILKRNPAFKPPADYRPP 256 Query: 1206 XXXXXXXXXVKEYPGYNFVGLIIGPRGLTQKRMQNETGASIKLRGKGSILEGKAKQKYD- 1382 +KEYPGYNF+GLIIGPRG TQKRM+ ETGA I +RGKGS+ EG+ +QK D Sbjct: 257 KLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEGRLQQKRDL 316 Query: 1383 ---PSDNDELHVLVEADDQKSLDDAIRMVEKLLIPVAEGMNEHKRAQLRELAQLS----- 1538 PS+N++LHVLVEAD Q++LD A MVEKLL PV E +NEHKR QLRELA L+ Sbjct: 317 KPDPSENEDLHVLVEADTQEALDAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRD 376 Query: 1539 ENQCKTCGVEGHMSYACPNWSSVVNSALTCDTCGSSSHSTANCPLTMSTPGSNFADQHQT 1718 E C+ CG GH YACP+ +S S + C CG H T +CP+ T G D++Q Sbjct: 377 EEYCRLCGEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPVK-GTTGKKMDDEYQN 435 Query: 1719 FLADLGGSGGFTFSTPNHSSCIPWQGGNSEFGISPSCSSNS----HSGRGLTPTTDNKSS 1886 FLA+LGG+ + PN++ I G+S G +P S+N+ +G G K Sbjct: 436 FLAELGGTVPDSLIKPNNALPIT---GSSGSGSNPPWSNNAGGTAQAGLGANGA---KPI 489 Query: 1887 KEVDDANLFVGYLPYNVDDDRLRELFSPFGRLIEAKVIKDRSTGSSKGYGFVKYDNPTNA 2066 KE DD NL++GYLP ++DD L LFSPFG ++ AKVIKDR TG SKGYGFVKY + A Sbjct: 490 KEYDDTNLYIGYLPPTLEDDALIRLFSPFGDIVMAKVIKDRVTGLSKGYGFVKYSDVQQA 549 Query: 2067 AMAVGRMNGYKIDRKTLAVRVRGEPPSAVRSSTNLLPKYPGPAMLSQDNPSLASWPGPPG 2246 A+ MNGY+++ +T+AVRV G+PP +P P P P++ ++P Sbjct: 550 NSAIASMNGYRLEGRTIAVRVAGKPPQPA------VPPGPPP-------PAMPTYPSSNQ 596 Query: 2247 SMLPDPQFSSTKSNSLGLPYXXXXXXXXXXXXXXXXXRHIPFPSP----NSLTQFPGYPG 2414 ++ P T LG + P+P P + T PG P Sbjct: 597 AVGAYPSQQFTAGGPLGNTPPPSYAPGAPVPWGPVPPPYAPYPPPPPGSSLYTPVPGQPV 656 Query: 2415 PPGSVQPDPLFSSTKSDSLGLPHSSVFLGXXXXXXXXXXXXXXVPFLSPNTLTQLHGNAS 2594 PP VQ P T+S S G P +V V S +++ + + Sbjct: 657 PPYGVQYPPPPPPTQSVSAGAPAQTV-----VSSEAQQNFPPGVQSESGSSVQSVPTSVY 711 Query: 2595 PTSLTKFPGDPN---YTNSHNIFYF--TPPSNMSAQLHLTESPSSNNLSRFPWT------ 2741 +SL+ P +P T+S+ Y+ PP + + + S N+ PW+ Sbjct: 712 GSSLSAIPPNPQPAYSTSSYGYSYYGVAPPPPLPVPYPMAD--QSQNMGNAPWSSAPPVP 769 Query: 2742 PMHPPARAIKSHGNN 2786 P PPA K+HG + Sbjct: 770 PPVPPAEK-KTHGTD 783