BLASTX nr result

ID: Coptis25_contig00005794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005794
         (1306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFI41205.1| oxygenase protein, partial [Arabidopsis thaliana]      393   e-107
ref|NP_567941.1| oxidoreductase, 2OG-Fe(II) oxygenase family pro...   393   e-107
ref|XP_004141886.1| PREDICTED: prolyl 4-hydroxylase subunit alph...   392   e-107
dbj|BAD07294.1| prolyl 4-hydroxylase [Nicotiana tabacum]              392   e-106
ref|XP_002867145.1| oxidoreductase [Arabidopsis lyrata subsp. ly...   392   e-106

>gb|AFI41205.1| oxygenase protein, partial [Arabidopsis thaliana]
          Length = 288

 Score =  393 bits (1010), Expect = e-107
 Identities = 197/285 (69%), Positives = 226/285 (79%), Gaps = 6/285 (2%)
 Frame = -1

Query: 1012 MKS--KSYRSSFRGKLSLPIVFILCLAFFLAGFYGSMFLPYHQ---SPRSRLLESLAY-D 851
            MKS  KSYR   R KL L  V + C   FL GFYGS  L  +     PR R+LE +   +
Sbjct: 1    MKSRLKSYR---RKKLGLATVIVFCSLCFLFGFYGSTLLSQNVPRVKPRLRMLEMVENGE 57

Query: 850  TELESVPHGKKGDPFTSSIPFQVLSWKPRTVLYPGFATPEQCEIVIKRAKANLKPSTLAL 671
             E  S+PHG  G+    SIPFQVLSW+PR + +P FAT EQC+ +I+RAK NLKPS LAL
Sbjct: 58   EEAGSMPHGVTGEESIGSIPFQVLSWRPRAIYFPNFATAEQCQAIIERAKVNLKPSALAL 117

Query: 670  RKGETAENTQGIRTSSGTFLSASEDKTGVLDLIEQKIARATMIPQSHGEVFNILRYEIGQ 491
            RKGETAENT+G RTSSGTF+SASE+ TG LD +E+KIARATMIP+SHGE FNILRYE+GQ
Sbjct: 118  RKGETAENTKGTRTSSGTFISASEESTGALDFVERKIARATMIPRSHGESFNILRYELGQ 177

Query: 490  RYLAHFDAFNPAEYGPQKSQRIASFLLYLSDVEEGGETKFPYENGSNMDINYDFQECIGL 311
            +Y +H+D FNP EYGPQ SQRIASFLLYLSDVEEGGET FP+ENGSNM I YD+++CIGL
Sbjct: 178  KYDSHYDVFNPTEYGPQSSQRIASFLLYLSDVEEGGETMFPFENGSNMGIGYDYKQCIGL 237

Query: 310  KVKPRQGDGLLFYSLFPNGTIDQTSLHGSCPVITGEKWVATKWIR 176
            KVKPR+GDGLLFYS+FPNGTIDQTSLHGSCPV  GEKWVATKWIR
Sbjct: 238  KVKPRKGDGLLFYSVFPNGTIDQTSLHGSCPVTKGEKWVATKWIR 282


>ref|NP_567941.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
            thaliana] gi|17381226|gb|AAL36425.1| unknown protein
            [Arabidopsis thaliana] gi|20465827|gb|AAM20018.1| unknown
            protein [Arabidopsis thaliana] gi|21592377|gb|AAM64328.1|
            putative dioxygenase [Arabidopsis thaliana]
            gi|332660892|gb|AEE86292.1| oxidoreductase, 2OG-Fe(II)
            oxygenase family protein [Arabidopsis thaliana]
          Length = 288

 Score =  393 bits (1009), Expect = e-107
 Identities = 196/285 (68%), Positives = 226/285 (79%), Gaps = 6/285 (2%)
 Frame = -1

Query: 1012 MKS--KSYRSSFRGKLSLPIVFILCLAFFLAGFYGSMFLPYHQ---SPRSRLLESLAY-D 851
            MKS  KSYR   R KL L  V + C   FL GFYGS  L  +     PR R+L+ +   +
Sbjct: 1    MKSRLKSYR---RKKLGLATVIVFCSLCFLFGFYGSTLLSQNVPRVKPRLRMLDMVENGE 57

Query: 850  TELESVPHGKKGDPFTSSIPFQVLSWKPRTVLYPGFATPEQCEIVIKRAKANLKPSTLAL 671
             E  S+PHG  G+    SIPFQVLSW+PR + +P FAT EQC+ +I+RAK NLKPS LAL
Sbjct: 58   EEASSMPHGVTGEESIGSIPFQVLSWRPRAIYFPNFATAEQCQAIIERAKVNLKPSALAL 117

Query: 670  RKGETAENTQGIRTSSGTFLSASEDKTGVLDLIEQKIARATMIPQSHGEVFNILRYEIGQ 491
            RKGETAENT+G RTSSGTF+SASE+ TG LD +E+KIARATMIP+SHGE FNILRYE+GQ
Sbjct: 118  RKGETAENTKGTRTSSGTFISASEESTGALDFVERKIARATMIPRSHGESFNILRYELGQ 177

Query: 490  RYLAHFDAFNPAEYGPQKSQRIASFLLYLSDVEEGGETKFPYENGSNMDINYDFQECIGL 311
            +Y +H+D FNP EYGPQ SQRIASFLLYLSDVEEGGET FP+ENGSNM I YD+++CIGL
Sbjct: 178  KYDSHYDVFNPTEYGPQSSQRIASFLLYLSDVEEGGETMFPFENGSNMGIGYDYKQCIGL 237

Query: 310  KVKPRQGDGLLFYSLFPNGTIDQTSLHGSCPVITGEKWVATKWIR 176
            KVKPR+GDGLLFYS+FPNGTIDQTSLHGSCPV  GEKWVATKWIR
Sbjct: 238  KVKPRKGDGLLFYSVFPNGTIDQTSLHGSCPVTKGEKWVATKWIR 282


>ref|XP_004141886.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like [Cucumis
            sativus]
          Length = 294

 Score =  392 bits (1008), Expect = e-107
 Identities = 194/285 (68%), Positives = 231/285 (81%), Gaps = 6/285 (2%)
 Frame = -1

Query: 1012 MKSKSYRS--SFRGKLSLP-IVFILCLAFFLAGFYGSMFLPYH---QSPRSRLLESLAYD 851
            MK KS RS  S R KL LP ++F+LCL  FLAGF+GS  L        PR+RLL+S +  
Sbjct: 1    MKGKSGRSNWSLRSKLGLPALIFVLCLFCFLAGFFGSTLLSQDVDDDRPRARLLQSASDV 60

Query: 850  TELESVPHGKKGDPFTSSIPFQVLSWKPRTVLYPGFATPEQCEIVIKRAKANLKPSTLAL 671
            TE + +  G+ GD   SSIPFQVLSW+PR + +P FAT EQC+ ++  AK  L+PSTLAL
Sbjct: 61   TEFDLMSSGENGDDSISSIPFQVLSWRPRALYFPKFATAEQCQSIVNLAKPKLRPSTLAL 120

Query: 670  RKGETAENTQGIRTSSGTFLSASEDKTGVLDLIEQKIARATMIPQSHGEVFNILRYEIGQ 491
            RKGETAE+T+G+RTSSG F SASED++G L +IE+KIARATMIP++HGE +NILRYEIGQ
Sbjct: 121  RKGETAESTKGVRTSSGVFFSASEDESGTLGVIEEKIARATMIPRTHGEAYNILRYEIGQ 180

Query: 490  RYLAHFDAFNPAEYGPQKSQRIASFLLYLSDVEEGGETKFPYENGSNMDINYDFQECIGL 311
            +Y +H+DAF P+EYGPQKSQR+ASFLLYL+DVEEGGET FP+ENG NMD  Y+FQ CIGL
Sbjct: 181  KYNSHYDAFKPSEYGPQKSQRVASFLLYLTDVEEGGETMFPFENGLNMDGTYNFQTCIGL 240

Query: 310  KVKPRQGDGLLFYSLFPNGTIDQTSLHGSCPVITGEKWVATKWIR 176
            KVKPRQGDGLLFYS+FPNGTID TSLHGSCPVI G+KWVATKWIR
Sbjct: 241  KVKPRQGDGLLFYSVFPNGTIDPTSLHGSCPVIKGQKWVATKWIR 285


>dbj|BAD07294.1| prolyl 4-hydroxylase [Nicotiana tabacum]
          Length = 286

 Score =  392 bits (1007), Expect = e-106
 Identities = 190/268 (70%), Positives = 222/268 (82%), Gaps = 4/268 (1%)
 Frame = -1

Query: 967 LPIVFILCLAFFLAGFYGSMFLPYHQ----SPRSRLLESLAYDTELESVPHGKKGDPFTS 800
           LP VF+LCL FFL GF+GS    +       PR R LES+ Y  + + +P G+ G+    
Sbjct: 14  LPSVFLLCLFFFLLGFFGSALFSHQDVPSVRPRPRFLESV-YQEDFDPLPIGETGEHSLI 72

Query: 799 SIPFQVLSWKPRTVLYPGFATPEQCEIVIKRAKANLKPSTLALRKGETAENTQGIRTSSG 620
           SIPFQVLSW PR + +P FA+ EQC+ +IK AKAN++PS+LALR GET E T+GIRTSSG
Sbjct: 73  SIPFQVLSWFPRALYFPNFASIEQCQSIIKMAKANMEPSSLALRTGETEETTKGIRTSSG 132

Query: 619 TFLSASEDKTGVLDLIEQKIARATMIPQSHGEVFNILRYEIGQRYLAHFDAFNPAEYGPQ 440
           TF+SASEDKTG+LDLIE+KIA+ATMIP++HGE FN+LRYEIGQRY +H+DAF+PA+YGPQ
Sbjct: 133 TFISASEDKTGILDLIEEKIAKATMIPKTHGEAFNVLRYEIGQRYQSHYDAFDPAQYGPQ 192

Query: 439 KSQRIASFLLYLSDVEEGGETKFPYENGSNMDINYDFQECIGLKVKPRQGDGLLFYSLFP 260
           KSQR ASFLLYLSDVEEGGET FPYENG NMD +YDF +CIGLKVKPR+GDGLLFYSLFP
Sbjct: 193 KSQRAASFLLYLSDVEEGGETVFPYENGQNMDASYDFSKCIGLKVKPRRGDGLLFYSLFP 252

Query: 259 NGTIDQTSLHGSCPVITGEKWVATKWIR 176
           NGTID TSLHGSCPVI GEKWVATKWIR
Sbjct: 253 NGTIDLTSLHGSCPVIRGEKWVATKWIR 280


>ref|XP_002867145.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
            gi|297312981|gb|EFH43404.1| oxidoreductase [Arabidopsis
            lyrata subsp. lyrata]
          Length = 288

 Score =  392 bits (1006), Expect = e-106
 Identities = 196/285 (68%), Positives = 224/285 (78%), Gaps = 6/285 (2%)
 Frame = -1

Query: 1012 MKS--KSYRSSFRGKLSLPIVFILCLAFFLAGFYGSMFLPYHQ---SPRSRLLESLAYDT 848
            MKS  KSY+   R KL L  V + C   FL GFYGS  L  +     PR R+LE +    
Sbjct: 1    MKSRLKSYK---RKKLGLATVIVFCSLCFLVGFYGSTLLSQNVPRVKPRLRMLEMVENGE 57

Query: 847  E-LESVPHGKKGDPFTSSIPFQVLSWKPRTVLYPGFATPEQCEIVIKRAKANLKPSTLAL 671
            E   S+PHG  G+    SIPFQVLSW+PR + +P FAT EQC+ +I+RAK NLKPS LAL
Sbjct: 58   EDTGSMPHGVTGEESVGSIPFQVLSWRPRAIYFPNFATAEQCQAIIERAKVNLKPSALAL 117

Query: 670  RKGETAENTQGIRTSSGTFLSASEDKTGVLDLIEQKIARATMIPQSHGEVFNILRYEIGQ 491
            RKGETAENT+G RTSSGTF+SASED TG LD +E+KIARATMIP+SHGE FNILRYE+GQ
Sbjct: 118  RKGETAENTKGTRTSSGTFISASEDSTGALDFVERKIARATMIPRSHGESFNILRYELGQ 177

Query: 490  RYLAHFDAFNPAEYGPQKSQRIASFLLYLSDVEEGGETKFPYENGSNMDINYDFQECIGL 311
            +Y +H+D FNP EYGPQ SQRIASFLLYLSDVEEGGET FP+ENGSNM   YD+++CIGL
Sbjct: 178  KYDSHYDVFNPTEYGPQSSQRIASFLLYLSDVEEGGETMFPFENGSNMGTGYDYKQCIGL 237

Query: 310  KVKPRQGDGLLFYSLFPNGTIDQTSLHGSCPVITGEKWVATKWIR 176
            KVKPR+GDGLLFYS+FPNGTIDQTSLHGSCPV  GEKWVATKWIR
Sbjct: 238  KVKPRKGDGLLFYSVFPNGTIDQTSLHGSCPVTKGEKWVATKWIR 282


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