BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005750
         (2684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002439942.1| hypothetical protein SORBIDRAFT_09g023070 [S...   190   2e-45
gb|AFW78330.1| putative RING/U-box superfamily protein [Zea mays]     185   6e-44
ref|NP_001147524.1| zinc finger, C3HC4 type family protein [Zea ...   185   6e-44
gb|AFW82289.1| putative RING zinc finger domain superfamily prot...   184   1e-43
ref|NP_001055809.1| Os05g0470700 [Oryza sativa Japonica Group] g...   184   1e-43

>ref|XP_002439942.1| hypothetical protein SORBIDRAFT_09g023070 [Sorghum bicolor]
            gi|241945227|gb|EES18372.1| hypothetical protein
            SORBIDRAFT_09g023070 [Sorghum bicolor]
          Length = 551

 Score =  190 bits (482), Expect = 2e-45
 Identities = 112/261 (42%), Positives = 143/261 (54%), Gaps = 13/261 (4%)
 Frame = +3

Query: 1230 EGVAVEDIGQDGKEQGNGMANFDCNVCLDVAKEPVVTSCGHLFCWPCLYQWLHIHCDHRE 1409
            +G  V     DG E G   A F+CN+C ++A+EPVVTSCGHLFCWPCLYQWLH+H  H+E
Sbjct: 210  DGAVVGVSEDDGTEHGKSAAMFECNICFEMAEEPVVTSCGHLFCWPCLYQWLHVHSSHKE 269

Query: 1410 CPVCKGEVTEADITPIYGRGNS----EKESGRGGKEVDSSLKIPPRPRGRRSEGLRQRIS 1577
            CPVCKGEVTE +ITPIYGRGNS    EK+    G    S  KIPPRP G R E  RQ+  
Sbjct: 270  CPVCKGEVTEGNITPIYGRGNSGSDTEKKVAEDGNA--SGPKIPPRPHGNRLESFRQQFH 327

Query: 1578 --RPLLRRPRED---LGSWRFVVDDELINQPDELEEPPMLGTFEGASNR----RMLTRLM 1730
              RP+ RR  +    L +WR + D  L+N    LE PP     E A +     RM TRL 
Sbjct: 328  HLRPISRRFGDTHGLLSTWRRIFDQHLVNSMSRLEAPPEPSVSETAQHASRLGRMTTRL- 386

Query: 1731 AAQRFQREDQYIENMVNFGGNGSSSSATEVANSERLLDRIQGIGTHPILARRGIDFWRRF 1910
             A+R QRE +   ++V+     S+  + +  N+   L R      H      G+D  R  
Sbjct: 387  RARRLQREAENPTSVVS-----SAPDSGQPGNNTSDLPRRSSSPFH----AEGMDLLRHI 437

Query: 1911 AFNSLLSTERLTAIAADLSTV 1973
            AF  L  +ER     ++L  +
Sbjct: 438  AFAGLEDSERFATAVSELRRI 458


>gb|AFW78330.1| putative RING/U-box superfamily protein [Zea mays]
          Length = 550

 Score =  185 bits (469), Expect = 6e-44
 Identities = 108/256 (42%), Positives = 136/256 (53%), Gaps = 9/256 (3%)
 Frame = +3

Query: 1233 GVAVEDIGQDGKEQGNGMANFDCNVCLDVAKEPVVTSCGHLFCWPCLYQWLHIHCDHREC 1412
            G  V     DG E G     F+CN+C ++A EPVVTSCGHLFCWPCLYQWLH+H  H+EC
Sbjct: 211  GAVVGVSEDDGTEHGKSAPMFECNICFEMADEPVVTSCGHLFCWPCLYQWLHVHSSHKEC 270

Query: 1413 PVCKGEVTEADITPIYGRGNS----EKESGRGGKEVDSSLKIPPRPRGRRSEGLRQRIS- 1577
            PVCKGEVTE +ITPIYGRGNS    EK+    GK   S  KIPPRP G R E  RQ+   
Sbjct: 271  PVCKGEVTEGNITPIYGRGNSGSEMEKKVAEDGKA--SGPKIPPRPHGNRLESFRQQFHH 328

Query: 1578 -RPLLRRPRED---LGSWRFVVDDELINQPDELEEPPMLGTFEGASNRRMLTRLMAAQRF 1745
             RP+ RR  E    L +WR ++D  L N     E PP     E A +   L R+    R 
Sbjct: 329  LRPISRRLGEAHGFLSTWRRILDRHLANSMSRFEGPPEPSVSETAQHASSLGRMTTRLRA 388

Query: 1746 QREDQYIENMVNFGGNGSSSSATEVANSERLLDRIQGIGTHPILARRGIDFWRRFAFNSL 1925
            +R  +  EN  +   + +  S   V N+  L  R     ++P     G+D  R  AF  L
Sbjct: 389  RRWQREAENPTSI-DSSAPDSGQPVNNTFDLPRR----SSNP-FPSEGMDLLRHIAFTGL 442

Query: 1926 LSTERLTAIAADLSTV 1973
              +ER     ++L  +
Sbjct: 443  EDSERFATAVSELRRI 458


>ref|NP_001147524.1| zinc finger, C3HC4 type family protein [Zea mays]
            gi|195611986|gb|ACG27823.1| zinc finger, C3HC4 type
            family protein [Zea mays]
          Length = 550

 Score =  185 bits (469), Expect = 6e-44
 Identities = 108/256 (42%), Positives = 136/256 (53%), Gaps = 9/256 (3%)
 Frame = +3

Query: 1233 GVAVEDIGQDGKEQGNGMANFDCNVCLDVAKEPVVTSCGHLFCWPCLYQWLHIHCDHREC 1412
            G  V     DG E G     F+CN+C ++A EPVVTSCGHLFCWPCLYQWLH+H  H+EC
Sbjct: 211  GAVVGVSEDDGTEHGKSAPMFECNICFEMADEPVVTSCGHLFCWPCLYQWLHVHSSHKEC 270

Query: 1413 PVCKGEVTEADITPIYGRGNS----EKESGRGGKEVDSSLKIPPRPRGRRSEGLRQRIS- 1577
            PVCKGEVTE +ITPIYGRGNS    EK+    GK   S  KIPPRP G R E  RQ+   
Sbjct: 271  PVCKGEVTEGNITPIYGRGNSGSEMEKKVAEDGKA--SGPKIPPRPHGNRLESFRQQFHH 328

Query: 1578 -RPLLRRPRED---LGSWRFVVDDELINQPDELEEPPMLGTFEGASNRRMLTRLMAAQRF 1745
             RP+ RR  E    L +WR ++D  L N     E PP     E A +   L R+    R 
Sbjct: 329  LRPISRRLGEAHGFLSTWRRILDRHLANSMSRFEGPPEPSVSETAQHASSLGRMTTRLRA 388

Query: 1746 QREDQYIENMVNFGGNGSSSSATEVANSERLLDRIQGIGTHPILARRGIDFWRRFAFNSL 1925
            +R  +  EN  +   + +  S   V N+  L  R     ++P     G+D  R  AF  L
Sbjct: 389  RRWQREAENPTSI-DSSAPDSGQPVNNTFDLPRR----SSNP-FPSEGMDLLRHIAFTGL 442

Query: 1926 LSTERLTAIAADLSTV 1973
              +ER     ++L  +
Sbjct: 443  EDSERFATAVSELRRI 458


>gb|AFW82289.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 550

 Score =  184 bits (467), Expect = 1e-43
 Identities = 110/262 (41%), Positives = 139/262 (53%), Gaps = 10/262 (3%)
 Frame = +3

Query: 1218 KDGGEGVAVEDIGQDGKEQGNGMANFDCNVCLDVAKEPVVTSCGHLFCWPCLYQWLHIHC 1397
            K   EG  V     DG E G   A F+CN+C ++A EPVVTSCGHLFCWPCLYQWLH+H 
Sbjct: 206  KVAAEGAVVGVSEDDGTEHGKSTAMFECNICFEMADEPVVTSCGHLFCWPCLYQWLHVHS 265

Query: 1398 DHRECPVCKGEVTEADITPIYGRGNSEKESGRGGKEVDSS-LKIPPRPRGRRSEGLRQRI 1574
             H+ECPVCKGEVTE +ITPIYGRGNS     +  ++ ++S  KIPPRP G R E  RQ+ 
Sbjct: 266  SHKECPVCKGEVTEGNITPIYGRGNSGSAMEKVAEDGNASGPKIPPRPHGNRLESFRQQF 325

Query: 1575 S--RPLLRRPRED---LGSWRFVVDDELINQPDELEEPPMLGTFEGASNR----RMLTRL 1727
               RP+ RR  E    L +WR + D  L N     E  P L   E A +     RM TRL
Sbjct: 326  HHLRPISRRLGEAHGFLSTWRRIFDQHLANSMSRFEGTPELSVSETAQHASRLGRMTTRL 385

Query: 1728 MAAQRFQREDQYIENMVNFGGNGSSSSATEVANSERLLDRIQGIGTHPILARRGIDFWRR 1907
              A+R QRE +    +V        SSA +          +    + P     G+D  R+
Sbjct: 386  -RARRLQREAENPTPIV--------SSAPDSGQPRNNTPDLPRRSSSP-FPSEGMDLLRQ 435

Query: 1908 FAFNSLLSTERLTAIAADLSTV 1973
             AF  L  +ER     ++L  +
Sbjct: 436  IAFAGLEDSERFATAVSELRRI 457


>ref|NP_001055809.1| Os05g0470700 [Oryza sativa Japonica Group]
            gi|113579360|dbj|BAF17723.1| Os05g0470700 [Oryza sativa
            Japonica Group] gi|215769483|dbj|BAH01712.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|222631919|gb|EEE64051.1| hypothetical protein
            OsJ_18880 [Oryza sativa Japonica Group]
          Length = 562

 Score =  184 bits (467), Expect = 1e-43
 Identities = 112/262 (42%), Positives = 145/262 (55%), Gaps = 13/262 (4%)
 Frame = +3

Query: 1230 EGVAVEDIGQDGKEQGNGMANFDCNVCLDVAKEPVVTSCGHLFCWPCLYQWLHIHCDHRE 1409
            +G  V    ++  E+G  +A F+CN+C ++A EPVVTSCGHLFCWPCLYQWLH+H  H+E
Sbjct: 215  DGAIVGASEEEPAERGKSVAMFECNICFEMASEPVVTSCGHLFCWPCLYQWLHVHSTHKE 274

Query: 1410 CPVCKGEVTEADITPIYGRGNSEKESGRGGKEVD--SSLKIPPRPRGRRSEGLRQRIS-- 1577
            CPVCKGEVTE +ITPIYGRGNS  ++ +   E    S   IPPRP G R E  RQ+    
Sbjct: 275  CPVCKGEVTEGNITPIYGRGNSTSDAEKKVAEEGNVSGPTIPPRPHGNRLESFRQKFHHL 334

Query: 1578 RPLLRRPRED---LGSWRFVVDDELINQPDELEEPP------MLGTFEGASNRRMLTRLM 1730
            RP+ RR  E    L SWR ++D +++N     E PP      M+     AS    +T  M
Sbjct: 335  RPISRRLGEAHGILSSWRRILDQQIMNSVSRFEGPPESTVQEMIDHAHHASRLGRITTRM 394

Query: 1731 AAQRFQREDQYIENMVNFGGNGSSSSATEVANSERLLDRIQGIGTHPILARRGIDFWRRF 1910
             A+R QRE    EN      + + S     ANS   L R     + P  + R ID  + F
Sbjct: 395  RARRLQRE---AENSTFVASSAAESGLP--ANSTSDLPR---RSSSPFSSER-IDLLQHF 445

Query: 1911 AFNSLLSTERLTAIAADLSTVV 1976
                L STERL +  +DL  +V
Sbjct: 446  V--DLASTERLASAVSDLRRMV 465