BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005737
         (1501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    91   1e-33
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   105   2e-33
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...    80   5e-24
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...    82   6e-24
emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]   111   6e-22

>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 90.5 bits (223), Expect(2) = 1e-33
 Identities = 49/111 (44%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
 Frame = -1

Query: 508 YFTRGFLVFNLDLIALKWVELKSICGRTIFLGDNSSFSVSAFDFPGCRPDCIYVTDDYHE 329
           Y T GF VF ++   L W  ++++  R +F+G NSS S  A DF GC  DCIY TDDY E
Sbjct: 285 YRTVGFEVFKMNWGLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSE 344

Query: 328 GYMHVERHGVGPHDIGVFNLEDGSYE--PCYTRK--SNLLLPRPIWIEPTP 188
                +    G HD+GVF L D S E  PC+ +   S L  P PIW+ P P
Sbjct: 345 SN---DDDACGKHDLGVFRLRDKSIEPLPCFNQNSCSRLRWPLPIWVSPNP 392



 Score = 80.9 bits (198), Expect(2) = 1e-33
 Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 30/257 (11%)
 Frame = -2

Query: 1287 VHWLALPDHILQLVADRFIDVKDVIGFAAVCKQWRSFVHTAIGVQLHRQVPLLMLSSQLD 1108
            V W  LP  +L+ ++       D + F +VC+ WRS V   I + L  Q+P LMLS +  
Sbjct: 3    VEWGELPPELLESISKTLTIYVDYLRFRSVCRSWRSSV-PKIPLHLPPQLPWLMLSRRAF 61

Query: 1107 HDGPTRSLYSVTEKKIYNSEILIPDNRF-IISSSYGW*VTVSKNNDVSLLNPFLLQNNEI 931
             D       S+ +  + N +   P +R  I  SS+GW V + +   + LLNP       +
Sbjct: 62   FD------LSLNKTHLLNPQ---PSHRTRICGSSHGWLVMLDETPQIRLLNPLTRATRPL 112

Query: 930  ----HLPSLTSLD-ARLGQPYYVK--------------------KAILSANPISNSDFIV 826
                  P++ + D A +G+ Y ++                    K +LSA+P  N DF  
Sbjct: 113  PPLHAFPNVVAFDHANVGREYLIQNPYGGLYAFNLRQMCNSFLGKVVLSASPTLNDDFAA 172

Query: 825  IAIYGGFRRIAFCKPGDRCWIKL---DLAYTLMDDVICFRDQFYFVHWVGDVFSCELSHD 655
            +AI G    +AFC+ G   WI L   +      +DV+ +   F+ V   G +  C+    
Sbjct: 173  LAIVGQ-NNLAFCRNGYDSWIFLNGEEEEMNCWEDVVNYNGLFFAVSKGGTIAVCDAGEG 231

Query: 654  SSDPKMSKV-ASSPFFF 607
               P++S +  ++PF F
Sbjct: 232  CFPPRVSIIQTTTPFGF 248


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  105 bits (262), Expect(2) = 2e-33
 Identities = 75/235 (31%), Positives = 117/235 (49%), Gaps = 13/235 (5%)
 Frame = -2

Query: 1281 WLALPDHILQLVADRFIDVKDVIGFAAVCKQWRSFVHTAIGVQLHRQVPLLMLSSQLDHD 1102
            W  +PD  L+L+A++   V+D + F  VCK W S            + P LML+ +   +
Sbjct: 922  WSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKSPWLMLAEK--EN 979

Query: 1101 GPTRSLYSVTEKKIYNSEILIPD--NRFIISSSYGW*VTVSKNNDVSLLNPFLLQNNEIH 928
               R  YS    K+Y  EI +P+   ++   S YGW VT+  + D+ LLNP  L   +I 
Sbjct: 980  SEIRGFYSPLSGKVY--EIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNP--LTRVQIL 1035

Query: 927  LPSL-----------TSLDARLGQPYYVKKAILSANPISNSDFIVIAIYGGFRRIAFCKP 781
            LPSL           +S      +  ++ KA+LS+ P S+ D  V+ IY  + R+AF KP
Sbjct: 1036 LPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAP-SSPDCAVMIIYSDYGRLAFTKP 1094

Query: 780  GDRCWIKLDLAYTLMDDVICFRDQFYFVHWVGDVFSCELSHDSSDPKMSKVASSP 616
            G + W  L+     +DD+I F   F  V+   +V+ C++S   S  K  + A++P
Sbjct: 1095 GHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDIS--GSQLKTIRFAAAP 1147



 Score = 65.1 bits (157), Expect(2) = 2e-33
 Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
 Frame = -1

Query: 595  QSKYLVESFGXXXXXXXXXXXXXXXXXXDYFTRGFLVFNLDLIALKWVELKSICGRTIFL 416
            ++KYLVES G                     T  F V  LD+   +W E++++   + FL
Sbjct: 1158 EAKYLVESGGEIYMVTRNLYDTARRDIPYMRTWTFSVLKLDMCNKRWEEVENLDHCSFFL 1217

Query: 415  GDNSSFSVSAFDFPGCRPDCIYVTDDYHEGYMHVERHGVGPHDIGVFNLEDGSYEPCYTR 236
            G+N SFS  A D+P  R + IY TDDY  G++++ R+     D+G++N ++   E     
Sbjct: 1218 GNNHSFSTWASDYPEFRKNSIYFTDDYC-GFLNIPRN----FDMGIYNFQNTQIEHYPVG 1272

Query: 235  KSNL-LLPRPIWIEPT 191
               L +   P+WI P+
Sbjct: 1273 HDALSMFSAPLWIRPS 1288


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
            gi|223551310|gb|EEF52796.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 406

 Score = 80.5 bits (197), Expect(2) = 5e-24
 Identities = 77/252 (30%), Positives = 112/252 (44%), Gaps = 30/252 (11%)
 Frame = -2

Query: 1281 WLALPDHILQLVADRFIDVKDVIGFAAVCKQWRSFVHTAIGVQLHRQVPLLMLSSQLDHD 1102
            W  LP  +LQ +  +  +  D I   AVCK W S +       L R +P L+L    D+ 
Sbjct: 4    WSELPQELLQTITQKQTNYVDYISTRAVCKSWWSAIPKKPHDLLCR-LPWLLLPHHKDNP 62

Query: 1101 GPTRSLYSVTEKKIYNSEILIPDNRFIISSSYGW*VTVSKNNDVSLLNPFLLQNNEIHLP 922
               R  Y+ ++ K Y+ E+    ++    SS+GW V V     + LLNP  L  + I LP
Sbjct: 63   N-HRGFYNPSDGKTYHLELPETVDKRCCGSSHGWLVMVEDTPSIFLLNP--LTKSRIELP 119

Query: 921  SLTSL----------DARLGQPY------------YVKKAILSANPISNSDFIVIAIY-- 814
            SL++           ++R    Y            Y++KAI+S +P S   F+V+AIY  
Sbjct: 120  SLSTFPNFPTEVIYQNSRNLNEYFIRNNKLRIRETYIRKAIVSEDP-SVGSFMVMAIYKT 178

Query: 813  -GGFRRIAFCKPGDRCWI-----KLDLAYTLMDDVICFRDQFYFVHWVGDVFSCELSHDS 652
              G   IAFCK GD           ++ Y    DV+  R +FY V+  G V  C    D 
Sbjct: 179  INGSENIAFCKSGDAALFTTQETSQEIHY---QDVMFHRGKFYMVNDKGRVSIC--ITDI 233

Query: 651  SDPKMSKVASSP 616
            + P +  VA  P
Sbjct: 234  NPPSVIHVADPP 245



 Score = 58.5 bits (140), Expect(2) = 5e-24
 Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 22/129 (17%)
 Frame = -1

Query: 508 YFTRGFLVFNLDLIALKWVELKSICGRTIFLGDNSSFSVSAFDFPGCRPDCIYVTDDYHE 329
           Y T  F+V+ LD  +  W +L  +     FLG N   S+SA +   C  +CIY TDD   
Sbjct: 281 YQTHKFIVYKLDSSSSNWSKLDGLGDMIFFLGWNCFDSISAHNCGNCSGNCIYFTDD--- 337

Query: 328 GYMHVERHGVGPHDIGVFNLEDGSYE----PCYTRK------------------SNLLLP 215
            ++         HD GVFN +DGS      P Y  K                  S+ +LP
Sbjct: 338 NFIVDSDFSWEGHDYGVFNFDDGSVRRLDPPSYPIKPHFLPLVFFHERSLKRDRSSFVLP 397

Query: 214 RPIWIEPTP 188
            P+W+   P
Sbjct: 398 PPVWVTINP 406


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
            gi|223551309|gb|EEF52795.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 406

 Score = 82.4 bits (202), Expect(2) = 6e-24
 Identities = 77/253 (30%), Positives = 112/253 (44%), Gaps = 30/253 (11%)
 Frame = -2

Query: 1284 HWLALPDHILQLVADRFIDVKDVIGFAAVCKQWRSFVHTAIGVQLHR---QVPLLMLSSQ 1114
            +W  LP  +LQ +  +  +  D I   AVCK W S    AI  + H    Q+P L+L   
Sbjct: 3    NWSELPQELLQTITQKQSNYVDYISTRAVCKSWWS----AIPKKPHDLLCQLPWLLLPYH 58

Query: 1113 LDHDGPTRSLYSVTEKKIYNSEILIPDNRFIISSSYGW*VTVSKNNDVSLLNPFLLQNNE 934
             ++    R  Y++ + K Y+ E+     +    SS+GW V V     + LLNP  L    
Sbjct: 59   KNNPN-HRGFYNLADGKTYHLELPETIEKRCCGSSHGWLVMVEDTPSIFLLNP--LTKAR 115

Query: 933  IHLPSLTSL----------DARLGQPY------------YVKKAILSANPISNSDFIVIA 820
            I LPSL++           ++R    Y            Y++KAI+S +P S  +F V+A
Sbjct: 116  IELPSLSTFPYFPTEVVYENSRNINEYFNTKAKLRIRETYIRKAIVSEDP-STGNFAVMA 174

Query: 819  IY---GGFRRIAFCKPGDRCWIKLDLAYTLM--DDVICFRDQFYFVHWVGDVFSCELSHD 655
            IY        IAFCK GD  W  +      +   DV+  R +FY V   G V  C    D
Sbjct: 175  IYKTINSTENIAFCKSGDATWFTIQETSQKIHYQDVMFHRGKFYAVDDKGRVSIC--ITD 232

Query: 654  SSDPKMSKVASSP 616
             + P + +VA  P
Sbjct: 233  INPPSVIQVADPP 245



 Score = 56.2 bits (134), Expect(2) = 6e-24
 Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 22/129 (17%)
 Frame = -1

Query: 508 YFTRGFLVFNLDLIALKWVELKSICGRTIFLGDNSSFSVSAFDFPGCRPDCIYVTDDYHE 329
           Y T  F+V+ LD  +  W+EL  +     FLG N   S+S  ++     +CIY TDD   
Sbjct: 281 YQTHKFMVYKLDASSSNWLELDGLGDMLSFLGWNCFHSISTQNYRNYSGNCIYFTDDKFI 340

Query: 328 GYMHVERHGVGPHDIGVFNLEDGSYE----PCYTRK------------------SNLLLP 215
                   G   HD G+FNL+D S +    P Y  K                  S+ +LP
Sbjct: 341 VGSDFPWEG---HDYGIFNLDDKSVQRLGLPSYPIKLPILPFIYGYERSLKRDRSSFILP 397

Query: 214 RPIWIEPTP 188
            PIW+   P
Sbjct: 398 PPIWVTINP 406


>emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]
          Length = 530

 Score =  111 bits (277), Expect = 6e-22
 Identities = 75/209 (35%), Positives = 109/209 (52%), Gaps = 14/209 (6%)
 Frame = -2

Query: 1281 WLALPDHILQLVADRFIDVKDVIGFAAVCKQW-----RSFVHTAIGVQLHRQVP----LL 1129
            W  LPD +L+ + +    + D I F AVC  W     +SF    +  + H Q P    L+
Sbjct: 133  WAWLPDDLLEPILNNLASIVDSIRFGAVCTPWHSLAVKSFQRLPVNQRPHLQPPPLPWLM 192

Query: 1128 MLSSQLDHDGPTRSLYSVTEKKIYNSEILIPDNRFIISSSYGW*VTVSKNNDVSLLNPFL 949
            +LS     D  +RS YS+T +K+    + +P       SS+GW +T  + N VSLL+PF 
Sbjct: 193  VLSKPNSKD--SRSFYSITHQKLSKFHLPVPPGTRYCGSSHGWLITTDETNAVSLLHPFS 250

Query: 948  LQNNEIHLPSLTSLD----ARLGQPYYVKKAILSANPISN-SDFIVIAIYGGFRRIAFCK 784
             Q   I LP LT L        G  Y++ K +LSANP SN  DF+++ IYG  + +AF K
Sbjct: 251  RQ--VIRLPPLTRLKIPQRTVYGFEYHLHKGVLSANPTSNPDDFVLMVIYGHDKGLAFIK 308

Query: 783  PGDRCWIKLDLAYTLMDDVICFRDQFYFV 697
             GD+ W  +D +  + DDV+   D  YF+
Sbjct: 309  SGDQNWAYID-SMVMKDDVL---DSPYFL 333



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
 Frame = -1

Query: 460 KWVELKSICGRTIFLGDNSSFSVSAFDFPGCRPDCIYV--TDDYHEGYMHVERHGVG-PH 290
           +WVE+ S+    +FLGDN S +V+A  F GCRP CIYV  TDD  E  M  ER      +
Sbjct: 428 EWVEVNSLGDVALFLGDNDSIAVTASRFSGCRPSCIYVASTDDTLEMNMEDERESFRYRY 487

Query: 289 DIGVFNLEDGSY 254
            +  FN+E GSY
Sbjct: 488 KLCEFNVETGSY 499