BLASTX nr result

ID: Coptis25_contig00005712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005712
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521961.1| cyclophilin, putative [Ricinus communis] gi|...   271   8e-71
gb|ACG70968.1| cyclophilin [Ziziphus jujuba]                          271   1e-70
gb|AFK44397.1| unknown [Lotus japonicus]                              269   4e-70
ref|XP_002325319.1| predicted protein [Populus trichocarpa] gi|2...   269   5e-70
gb|AER12108.1| CYP [Gossypium hirsutum]                               266   3e-69

>ref|XP_002521961.1| cyclophilin, putative [Ricinus communis]
           gi|223538765|gb|EEF40365.1| cyclophilin, putative
           [Ricinus communis]
          Length = 174

 Score =  271 bits (694), Expect = 8e-71
 Identities = 138/192 (71%), Positives = 148/192 (77%)
 Frame = -3

Query: 690 MANPKVFFDIAIGKTKAGRIVMELFKDVTPKTAENFRALCTGEKGIGRSGKPMHYKGSKF 511
           M+NPKVFFDI IGK KAGRIVMELF D TPKTAENFRALCTGEKGIG  GKP+HYKGS F
Sbjct: 1   MSNPKVFFDILIGKMKAGRIVMELFADFTPKTAENFRALCTGEKGIGSVGKPLHYKGSTF 60

Query: 510 HRIIPSFMCQXXXXXXXXXXXGESIYGXXXXXXXXXXXXXXXXXXXKFADENFKLKHTGP 331
           HRIIP+FMCQ           GESIYG                   KFADENFK+KHTGP
Sbjct: 61  HRIIPNFMCQGGDFTRGNGTGGESIYGM------------------KFADENFKMKHTGP 102

Query: 330 GILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGKVVDGYSVVEQMEKVGSPAGETSST 151
           GILSMANAG NTNGSQFFICTEKT WLDGKHVVFGKVVDGYSVV++MEKVGS +G TS  
Sbjct: 103 GILSMANAGPNTNGSQFFICTEKTPWLDGKHVVFGKVVDGYSVVKEMEKVGSESGRTSQG 162

Query: 150 VVIEDSGEVTES 115
           VVIED G++TE+
Sbjct: 163 VVIEDCGQITEN 174


>gb|ACG70968.1| cyclophilin [Ziziphus jujuba]
          Length = 174

 Score =  271 bits (692), Expect = 1e-70
 Identities = 137/190 (72%), Positives = 147/190 (77%)
 Frame = -3

Query: 690 MANPKVFFDIAIGKTKAGRIVMELFKDVTPKTAENFRALCTGEKGIGRSGKPMHYKGSKF 511
           M+NPKVFFDI IGK KAGR+VMELF DVTPKTAENFR LCTGEKGIG SGKP+HYKGS F
Sbjct: 1   MSNPKVFFDILIGKMKAGRVVMELFADVTPKTAENFRVLCTGEKGIGISGKPLHYKGSTF 60

Query: 510 HRIIPSFMCQXXXXXXXXXXXGESIYGXXXXXXXXXXXXXXXXXXXKFADENFKLKHTGP 331
           HRIIP+FMCQ           GESIYG                   KFADENFKLKHTGP
Sbjct: 61  HRIIPNFMCQGGDFTRGNGTGGESIYGT------------------KFADENFKLKHTGP 102

Query: 330 GILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGKVVDGYSVVEQMEKVGSPAGETSST 151
           GILSMANAG NTNGSQFFICTEKT WLDGKHVVFGKVVDGY+VV++MEKVGS +G TS  
Sbjct: 103 GILSMANAGPNTNGSQFFICTEKTPWLDGKHVVFGKVVDGYNVVKEMEKVGSDSGRTSQP 162

Query: 150 VVIEDSGEVT 121
           VVIED G++T
Sbjct: 163 VVIEDCGQIT 172


>gb|AFK44397.1| unknown [Lotus japonicus]
          Length = 174

 Score =  269 bits (688), Expect = 4e-70
 Identities = 137/192 (71%), Positives = 147/192 (76%)
 Frame = -3

Query: 690 MANPKVFFDIAIGKTKAGRIVMELFKDVTPKTAENFRALCTGEKGIGRSGKPMHYKGSKF 511
           M NPKVFFDIAIGKTKAGRI+MELF DVTPKTAENFRALCTGEKGIG+SGK +H+KGS F
Sbjct: 1   MTNPKVFFDIAIGKTKAGRILMELFADVTPKTAENFRALCTGEKGIGKSGKGLHFKGSAF 60

Query: 510 HRIIPSFMCQXXXXXXXXXXXGESIYGXXXXXXXXXXXXXXXXXXXKFADENFKLKHTGP 331
           HRIIP FMCQ           GESIYG                   KFADENFKLKHTGP
Sbjct: 61  HRIIPDFMCQGGDFTRGNGTGGESIYGA------------------KFADENFKLKHTGP 102

Query: 330 GILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGKVVDGYSVVEQMEKVGSPAGETSST 151
           GILSMANAG NTNGSQFFICT KT WLDGKHVVFGKVVDGY+VV++MEKVGS  G TS  
Sbjct: 103 GILSMANAGPNTNGSQFFICTAKTPWLDGKHVVFGKVVDGYNVVKEMEKVGSGGGSTSEK 162

Query: 150 VVIEDSGEVTES 115
           VVIED G++ E+
Sbjct: 163 VVIEDCGQIVEN 174


>ref|XP_002325319.1| predicted protein [Populus trichocarpa]
           gi|224145735|ref|XP_002325747.1| predicted protein
           [Populus trichocarpa] gi|224145746|ref|XP_002325751.1|
           predicted protein [Populus trichocarpa]
           gi|118482658|gb|ABK93248.1| unknown [Populus
           trichocarpa] gi|222862194|gb|EEE99700.1| predicted
           protein [Populus trichocarpa]
           gi|222862622|gb|EEF00129.1| predicted protein [Populus
           trichocarpa] gi|222862626|gb|EEF00133.1| predicted
           protein [Populus trichocarpa]
          Length = 174

 Score =  269 bits (687), Expect = 5e-70
 Identities = 133/192 (69%), Positives = 147/192 (76%)
 Frame = -3

Query: 690 MANPKVFFDIAIGKTKAGRIVMELFKDVTPKTAENFRALCTGEKGIGRSGKPMHYKGSKF 511
           M+NPKVFFDI IGK KAGRIVMELF D TPKTAENFRALCTGEKGIG +GKP+HYKGS F
Sbjct: 1   MSNPKVFFDILIGKMKAGRIVMELFADATPKTAENFRALCTGEKGIGNAGKPLHYKGSTF 60

Query: 510 HRIIPSFMCQXXXXXXXXXXXGESIYGXXXXXXXXXXXXXXXXXXXKFADENFKLKHTGP 331
           HRIIP+FMCQ           GESIYG                   KFADENFKLKHTGP
Sbjct: 61  HRIIPNFMCQGGDFTRGNGTGGESIYGA------------------KFADENFKLKHTGP 102

Query: 330 GILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGKVVDGYSVVEQMEKVGSPAGETSST 151
           G+LSMAN+G NTNGSQFFICTE TSWLDGKHVVFGKVVDGY VV++MEKVGS +G T  T
Sbjct: 103 GVLSMANSGPNTNGSQFFICTENTSWLDGKHVVFGKVVDGYGVVQEMEKVGSNSGTTKET 162

Query: 150 VVIEDSGEVTES 115
           V++ED G++ E+
Sbjct: 163 VIVEDCGQIIEN 174


>gb|AER12108.1| CYP [Gossypium hirsutum]
          Length = 174

 Score =  266 bits (680), Expect = 3e-69
 Identities = 134/192 (69%), Positives = 145/192 (75%)
 Frame = -3

Query: 690 MANPKVFFDIAIGKTKAGRIVMELFKDVTPKTAENFRALCTGEKGIGRSGKPMHYKGSKF 511
           M+NPKVFFDI IGK KAGR+VMELF DV PKTAENFRALCTGEKG+G+ GKP+HYKGS F
Sbjct: 1   MSNPKVFFDILIGKAKAGRVVMELFADVVPKTAENFRALCTGEKGVGQCGKPLHYKGSAF 60

Query: 510 HRIIPSFMCQXXXXXXXXXXXGESIYGXXXXXXXXXXXXXXXXXXXKFADENFKLKHTGP 331
           HRIIPSFMCQ           GESIYG                   KFADENF LKHTGP
Sbjct: 61  HRIIPSFMCQGGDFTRGNGTGGESIYGM------------------KFADENFNLKHTGP 102

Query: 330 GILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGKVVDGYSVVEQMEKVGSPAGETSST 151
           G LSMANAG NTNGSQFFICTEKT WLDGKHVVFGKVVDGYSVV++MEKVGS +G T   
Sbjct: 103 GCLSMANAGPNTNGSQFFICTEKTPWLDGKHVVFGKVVDGYSVVKEMEKVGSESGRTLQP 162

Query: 150 VVIEDSGEVTES 115
           VV+ED G+V E+
Sbjct: 163 VVVEDCGQVEEN 174


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