BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005707
         (1342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15262.3| unnamed protein product [Vitis vinifera]              447   e-123
ref|XP_002273058.1| PREDICTED: nuclear ribonuclease Z isoform 1 ...   447   e-123
ref|XP_003555802.1| PREDICTED: nuclear ribonuclease Z-like [Glyc...   432   e-118
ref|XP_002887553.1| hypothetical protein ARALYDRAFT_476606 [Arab...   425   e-116
ref|NP_177608.2| nuclear ribonuclease Z [Arabidopsis thaliana] g...   422   e-116

>emb|CBI15262.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  447 bits (1150), Expect = e-123
 Identities = 218/273 (79%), Positives = 242/273 (88%)
 Frame = -1

Query: 1108 LEIEGYPIEGLSIGGQETCVIFPTLKLAFDIGRCPQRAISQDFLFITHAHMDHIGGLPMY 929
            ++IEGYP+EGLSIGGQETC+I P+LKLAFDIGRCPQRAISQDFLFI+H HMDHIGGLPMY
Sbjct: 57   IQIEGYPVEGLSIGGQETCIILPSLKLAFDIGRCPQRAISQDFLFISHGHMDHIGGLPMY 116

Query: 928  VATRGLYKMEPPTVIVPVCIKENVEKLLQVHRSMDQSELKVKLIGLDIGEEFELRKGIKV 749
            VATRGLY+M+PP +IVP  IKENVE L QVHR+MD+SELK  LIGL++GEEF LRK +KV
Sbjct: 117  VATRGLYRMKPPIIIVPKAIKENVEMLFQVHRAMDESELKHNLIGLNVGEEFYLRKDLKV 176

Query: 748  RAFRTYHTIPSQGYIVYSMKQKLKQEYVGFPGNEIKNLKLSGVEITDTVTVPEIAFTGDT 569
            RAFRTYH IPSQGY+VYS+KQKLKQEYVG PGNEIKNLKLSGVEIT T+T PEIAFTGDT
Sbjct: 177  RAFRTYHVIPSQGYVVYSVKQKLKQEYVGLPGNEIKNLKLSGVEITYTMTTPEIAFTGDT 236

Query: 568  TSDFIVDANNADVLNAKILIVESTFVDNAKTVEHARDYGHTHLSEIVGHADRLCNKAILL 389
             SDFI+D  N D L A++LI+ESTFVDN  TVEHAR+YGHTHLSEIV +ADR  NKAILL
Sbjct: 237  MSDFILDHTNVDALMARVLIMESTFVDNTVTVEHAREYGHTHLSEIVSYADRFQNKAILL 296

Query: 388  IHFSARYEADEIRAAVSALPPNLAGRVFALTEG 290
            IHFSARY  DEI+ AVSALPP L GRVFALTEG
Sbjct: 297  IHFSARYTTDEIQEAVSALPPPLGGRVFALTEG 329


>ref|XP_002273058.1| PREDICTED: nuclear ribonuclease Z isoform 1 [Vitis vinifera]
          Length = 290

 Score =  447 bits (1150), Expect = e-123
 Identities = 218/273 (79%), Positives = 242/273 (88%)
 Frame = -1

Query: 1108 LEIEGYPIEGLSIGGQETCVIFPTLKLAFDIGRCPQRAISQDFLFITHAHMDHIGGLPMY 929
            ++IEGYP+EGLSIGGQETC+I P+LKLAFDIGRCPQRAISQDFLFI+H HMDHIGGLPMY
Sbjct: 17   IQIEGYPVEGLSIGGQETCIILPSLKLAFDIGRCPQRAISQDFLFISHGHMDHIGGLPMY 76

Query: 928  VATRGLYKMEPPTVIVPVCIKENVEKLLQVHRSMDQSELKVKLIGLDIGEEFELRKGIKV 749
            VATRGLY+M+PP +IVP  IKENVE L QVHR+MD+SELK  LIGL++GEEF LRK +KV
Sbjct: 77   VATRGLYRMKPPIIIVPKAIKENVEMLFQVHRAMDESELKHNLIGLNVGEEFYLRKDLKV 136

Query: 748  RAFRTYHTIPSQGYIVYSMKQKLKQEYVGFPGNEIKNLKLSGVEITDTVTVPEIAFTGDT 569
            RAFRTYH IPSQGY+VYS+KQKLKQEYVG PGNEIKNLKLSGVEIT T+T PEIAFTGDT
Sbjct: 137  RAFRTYHVIPSQGYVVYSVKQKLKQEYVGLPGNEIKNLKLSGVEITYTMTTPEIAFTGDT 196

Query: 568  TSDFIVDANNADVLNAKILIVESTFVDNAKTVEHARDYGHTHLSEIVGHADRLCNKAILL 389
             SDFI+D  N D L A++LI+ESTFVDN  TVEHAR+YGHTHLSEIV +ADR  NKAILL
Sbjct: 197  MSDFILDHTNVDALMARVLIMESTFVDNTVTVEHAREYGHTHLSEIVSYADRFQNKAILL 256

Query: 388  IHFSARYEADEIRAAVSALPPNLAGRVFALTEG 290
            IHFSARY  DEI+ AVSALPP L GRVFALTEG
Sbjct: 257  IHFSARYTTDEIQEAVSALPPPLGGRVFALTEG 289


>ref|XP_003555802.1| PREDICTED: nuclear ribonuclease Z-like [Glycine max]
          Length = 279

 Score =  432 bits (1111), Expect = e-118
 Identities = 210/273 (76%), Positives = 240/273 (87%)
 Frame = -1

Query: 1108 LEIEGYPIEGLSIGGQETCVIFPTLKLAFDIGRCPQRAISQDFLFITHAHMDHIGGLPMY 929
            LEIEGY + GLSIGG ETCVIFPTLK+AFDIGRCP RA+SQ+FL ITHAHMDHIGGLPMY
Sbjct: 6    LEIEGYTVGGLSIGGHETCVIFPTLKVAFDIGRCPPRAVSQNFLLITHAHMDHIGGLPMY 65

Query: 928  VATRGLYKMEPPTVIVPVCIKENVEKLLQVHRSMDQSELKVKLIGLDIGEEFELRKGIKV 749
            VATRGLY+M+PPT+IVP+ +KE+VEKL ++HR MDQSELK  LIGLD+GEEF LRK +KV
Sbjct: 66   VATRGLYRMKPPTIIVPISVKEDVEKLFEIHRKMDQSELKHNLIGLDVGEEFYLRKDLKV 125

Query: 748  RAFRTYHTIPSQGYIVYSMKQKLKQEYVGFPGNEIKNLKLSGVEITDTVTVPEIAFTGDT 569
            +AFRTYH IPSQGYI+YS KQKLK EYVG  GNEIKNLK SGVEIT T+T PEIAFTGDT
Sbjct: 126  KAFRTYHVIPSQGYILYSEKQKLKPEYVGLSGNEIKNLKSSGVEITYTLTEPEIAFTGDT 185

Query: 568  TSDFIVDANNADVLNAKILIVESTFVDNAKTVEHARDYGHTHLSEIVGHADRLCNKAILL 389
             SDFIVD NN DVL A+IL++E TFV+N+ TVEHARDYGHTHLSEI+ +A+ L N+AILL
Sbjct: 186  MSDFIVDENNTDVLRARILVLECTFVNNSITVEHARDYGHTHLSEIISYAESLQNRAILL 245

Query: 388  IHFSARYEADEIRAAVSALPPNLAGRVFALTEG 290
            IHFSARY  +EI+ AVSALPP+L+GR FALTEG
Sbjct: 246  IHFSARYTVEEIQHAVSALPPSLSGRTFALTEG 278


>ref|XP_002887553.1| hypothetical protein ARALYDRAFT_476606 [Arabidopsis lyrata subsp.
            lyrata] gi|297333394|gb|EFH63812.1| hypothetical protein
            ARALYDRAFT_476606 [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  425 bits (1093), Expect = e-116
 Identities = 202/273 (73%), Positives = 236/273 (86%)
 Frame = -1

Query: 1108 LEIEGYPIEGLSIGGQETCVIFPTLKLAFDIGRCPQRAISQDFLFITHAHMDHIGGLPMY 929
            ++IEGYPIEGLSIGG ETC+IFP+L++AFDIGRCP RAISQDFLFI+H+HMDHIGGLPMY
Sbjct: 7    MQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHIGGLPMY 66

Query: 928  VATRGLYKMEPPTVIVPVCIKENVEKLLQVHRSMDQSELKVKLIGLDIGEEFELRKGIKV 749
            VATRGLYKM+PPT+IVP  IKE VE L +VHR +D SELK  L+GLDIGEEF +RK +KV
Sbjct: 67   VATRGLYKMKPPTIIVPKSIKETVESLFEVHRKLDSSELKHNLVGLDIGEEFIIRKDLKV 126

Query: 748  RAFRTYHTIPSQGYIVYSMKQKLKQEYVGFPGNEIKNLKLSGVEITDTVTVPEIAFTGDT 569
            +AF+TYH I SQGY+VYS K KLKQEY+G  GNEIKNLK SGVEITD++T PE+AFTGDT
Sbjct: 127  KAFKTYHVIQSQGYVVYSTKHKLKQEYIGLSGNEIKNLKASGVEITDSITTPEVAFTGDT 186

Query: 568  TSDFIVDANNADVLNAKILIVESTFVDNAKTVEHARDYGHTHLSEIVGHADRLCNKAILL 389
            T+DF+VD +NAD L AK+L++ESTF+D++ +VEHARDYGH HLSEIV HA +  NKAILL
Sbjct: 187  TADFVVDESNADALKAKVLVMESTFLDDSVSVEHARDYGHIHLSEIVNHAAKFENKAILL 246

Query: 388  IHFSARYEADEIRAAVSALPPNLAGRVFALTEG 290
            IHFSARY   EI  AVSALPP L GRVFALT+G
Sbjct: 247  IHFSARYTVKEIEDAVSALPPPLEGRVFALTQG 279


>ref|NP_177608.2| nuclear ribonuclease Z [Arabidopsis thaliana]
            gi|88984765|sp|Q8LGU7.3|RNZN_ARATH RecName: Full=Nuclear
            ribonuclease Z; Short=RNase Z; AltName: Full=Zinc
            phosphodiesterase NUZ; AltName: Full=tRNA 3 endonuclease;
            AltName: Full=tRNase Z gi|20975609|emb|CAD22100.1| RNase
            Z [Arabidopsis thaliana] gi|90962972|gb|ABE02410.1|
            At1g74700 [Arabidopsis thaliana]
            gi|332197502|gb|AEE35623.1| nuclear ribonuclease Z
            [Arabidopsis thaliana]
          Length = 280

 Score =  422 bits (1086), Expect = e-116
 Identities = 199/273 (72%), Positives = 236/273 (86%)
 Frame = -1

Query: 1108 LEIEGYPIEGLSIGGQETCVIFPTLKLAFDIGRCPQRAISQDFLFITHAHMDHIGGLPMY 929
            ++IEGYPIEGLSIGG ETC+IFP+L++AFDIGRCP RAISQDFLFI+H+HMDHIGGLPMY
Sbjct: 7    MQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHIGGLPMY 66

Query: 928  VATRGLYKMEPPTVIVPVCIKENVEKLLQVHRSMDQSELKVKLIGLDIGEEFELRKGIKV 749
            VATRGLYKM+PPT+IVP  IKE VE L +VHR +D SELK  L+GLDIGEEF +RK +KV
Sbjct: 67   VATRGLYKMKPPTIIVPASIKETVESLFEVHRKLDSSELKHNLVGLDIGEEFIIRKDLKV 126

Query: 748  RAFRTYHTIPSQGYIVYSMKQKLKQEYVGFPGNEIKNLKLSGVEITDTVTVPEIAFTGDT 569
            +AF+T+H I SQGY+VYS K KLK+EY+G  GNEIKNLK+SGVEITD++  PE+AFTGDT
Sbjct: 127  KAFKTFHVIQSQGYVVYSTKYKLKKEYIGLSGNEIKNLKVSGVEITDSIITPEVAFTGDT 186

Query: 568  TSDFIVDANNADVLNAKILIVESTFVDNAKTVEHARDYGHTHLSEIVGHADRLCNKAILL 389
            TSDF+VD  NAD L AK+L++ESTF+D++ +VEHARDYGH H+SEIV HA++  NKAILL
Sbjct: 187  TSDFVVDETNADALKAKVLVMESTFLDDSVSVEHARDYGHIHISEIVNHAEKFENKAILL 246

Query: 388  IHFSARYEADEIRAAVSALPPNLAGRVFALTEG 290
            IHFSARY   EI  AVSALPP L GRVFALT+G
Sbjct: 247  IHFSARYTVKEIEDAVSALPPPLEGRVFALTQG 279