BLASTX nr result

ID: Coptis25_contig00005703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005703
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331116.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_003550013.1| PREDICTED: spindle assembly checkpoint compo...    72   6e-11
ref|XP_003529697.1| PREDICTED: spindle assembly checkpoint compo...    71   1e-10
emb|CBI29639.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002269253.1| PREDICTED: uncharacterized protein LOC100262...    70   2e-10

>ref|XP_002331116.1| predicted protein [Populus trichocarpa] gi|222872844|gb|EEF09975.1|
           predicted protein [Populus trichocarpa]
          Length = 729

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/66 (56%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
 Frame = +2

Query: 20  LLQCWHQKHETGKKL--FTFSSPSNEETLVLVKHLQEELRNYECEVQEARKLKSTHENNE 193
           L +C HQ+ E  KKL  FTF   S+ ++ +LVKHLQEELRN+E EV+EARK++S+HE+ E
Sbjct: 244 LTECSHQRSELEKKLSSFTFQEGSSTDSNILVKHLQEELRNFETEVREARKIRSSHESIE 303

Query: 194 LIKLNL 211
           L+K  L
Sbjct: 304 LLKEKL 309


>ref|XP_003550013.1| PREDICTED: spindle assembly checkpoint component mad1-like [Glycine
           max]
          Length = 703

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/61 (62%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
 Frame = +2

Query: 26  QCWHQKHETGKKLFTFSSP--SNEETLVLVKHLQEELRNYECEVQEARKLKSTHENNELI 199
           +C HQK E  KKL T  S   ++ E+ VLVKHLQ+ELRNYE EV+EARKL S+HEN EL+
Sbjct: 230 ECLHQKIEVEKKLSTLMSQEVASTESNVLVKHLQQELRNYESEVREARKLSSSHENIELL 289

Query: 200 K 202
           K
Sbjct: 290 K 290


>ref|XP_003529697.1| PREDICTED: spindle assembly checkpoint component mad1-like [Glycine
           max]
          Length = 701

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/64 (59%), Positives = 47/64 (73%), Gaps = 2/64 (3%)
 Frame = +2

Query: 26  QCWHQKHETGKKLFT--FSSPSNEETLVLVKHLQEELRNYECEVQEARKLKSTHENNELI 199
           +C HQK E  KKL T  F   ++ E+ VLVKHLQ+ELRNYE  V+EARKL+S+HEN EL+
Sbjct: 228 ECLHQKIEVEKKLSTLMFQEVASTESNVLVKHLQQELRNYESVVREARKLRSSHENVELL 287

Query: 200 KLNL 211
           K  L
Sbjct: 288 KEKL 291


>emb|CBI29639.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 3/67 (4%)
 Frame = +2

Query: 20  LLQCWHQKHETGKKLFTFSSP---SNEETLVLVKHLQEELRNYECEVQEARKLKSTHENN 190
           L +C HQK E  KKL + +S    ++ E+ +LVKHLQEELRNY  EV+EARKLKS+HEN 
Sbjct: 237 LNECLHQKSEAEKKLSSCTSQEVTTSMESDILVKHLQEELRNYGFEVREARKLKSSHENI 296

Query: 191 ELIKLNL 211
           EL+K  L
Sbjct: 297 ELLKEKL 303


>ref|XP_002269253.1| PREDICTED: uncharacterized protein LOC100262667 [Vitis vinifera]
          Length = 717

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 3/67 (4%)
 Frame = +2

Query: 20  LLQCWHQKHETGKKLFTFSSP---SNEETLVLVKHLQEELRNYECEVQEARKLKSTHENN 190
           L +C HQK E  KKL + +S    ++ E+ +LVKHLQEELRNY  EV+EARKLKS+HEN 
Sbjct: 237 LNECLHQKSEAEKKLSSCTSQEVTTSMESDILVKHLQEELRNYGFEVREARKLKSSHENI 296

Query: 191 ELIKLNL 211
           EL+K  L
Sbjct: 297 ELLKEKL 303


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