BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005699
         (1358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [...   103   7e-31
ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic ...   120   8e-25
ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic ...   120   8e-25
ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   117   7e-24
emb|CBI17056.3| unnamed protein product [Vitis vinifera]              117   7e-24

>ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [Medicago truncatula]
            gi|355507282|gb|AES88424.1| DNA polymerase epsilon
            catalytic subunit A [Medicago truncatula]
          Length = 2248

 Score =  103 bits (256), Expect(2) = 7e-31
 Identities = 47/64 (73%), Positives = 52/64 (81%)
 Frame = +2

Query: 497  LHALGWQIVAAKIGMQRCAASSQWLKERISLSRYAHVPLGNFELDWLLFTADIFFSRALH 676
            L  LGWQ +AAK+GMQRCAAS QWL E+I+LSRYAHVPLGN E DWL+FT D FF RAL 
Sbjct: 1633 LFILGWQQMAAKLGMQRCAASVQWLNEKIALSRYAHVPLGNMEFDWLMFTVDTFFCRALR 1692

Query: 677  DQQQ 688
            D QQ
Sbjct: 1693 DNQQ 1696



 Score = 58.5 bits (140), Expect(2) = 7e-31
 Identities = 27/42 (64%), Positives = 30/42 (71%)
 Frame = +1

Query: 250  HGPTVGVIECPKLHSLKSEISVLNDFPCVSIPCNASDSQYQV 375
            HGP V VIECP +  LK  I  L+DFPC+SIP NA DSQY V
Sbjct: 1581 HGPMVAVIECPDVQLLKLGIRALDDFPCLSIPFNARDSQYPV 1622


>ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like, partial
            [Cucumis sativus]
          Length = 2051

 Score =  120 bits (301), Expect = 8e-25
 Identities = 56/61 (91%), Positives = 58/61 (95%)
 Frame = +2

Query: 506  LGWQIVAAKIGMQRCAASSQWLKERISLSRYAHVPLGNFELDWLLFTADIFFSRALHDQQ 685
            LGWQ  AAKIGMQRCAASSQWL ERISL+RYAHVPLGNFELDWL+FTADIFFSRALHDQQ
Sbjct: 1605 LGWQQTAAKIGMQRCAASSQWLNERISLARYAHVPLGNFELDWLIFTADIFFSRALHDQQ 1664

Query: 686  Q 688
            Q
Sbjct: 1665 Q 1665



 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 27/47 (57%), Positives = 36/47 (76%)
 Frame = +1

Query: 238  RERHHGPTVGVIECPKLHSLKSEISVLNDFPCVSIPCNASDSQYQVM 378
            R  +HGP + VI+CP +  LKS + VL+DFPCV+IP NA D+QYQV+
Sbjct: 1559 RSLNHGPALAVIQCPSVQRLKSGVRVLDDFPCVTIPSNARDNQYQVL 1605


>ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Cucumis
            sativus]
          Length = 2206

 Score =  120 bits (301), Expect = 8e-25
 Identities = 56/61 (91%), Positives = 58/61 (95%)
 Frame = +2

Query: 506  LGWQIVAAKIGMQRCAASSQWLKERISLSRYAHVPLGNFELDWLLFTADIFFSRALHDQQ 685
            LGWQ  AAKIGMQRCAASSQWL ERISL+RYAHVPLGNFELDWL+FTADIFFSRALHDQQ
Sbjct: 1605 LGWQQTAAKIGMQRCAASSQWLNERISLARYAHVPLGNFELDWLIFTADIFFSRALHDQQ 1664

Query: 686  Q 688
            Q
Sbjct: 1665 Q 1665



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 28/47 (59%), Positives = 37/47 (78%)
 Frame = +1

Query: 238  RERHHGPTVGVIECPKLHSLKSEISVLNDFPCVSIPCNASDSQYQVM 378
            R  +HGPT+ VI+CP +  LKS + VL+DFPCV+IP NA D+QYQV+
Sbjct: 1559 RSLNHGPTLAVIQCPSVQRLKSGVRVLDDFPCVTIPSNARDNQYQVL 1605


>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score =  117 bits (293), Expect = 7e-24
 Identities = 54/62 (87%), Positives = 59/62 (95%)
 Frame = +2

Query: 503  ALGWQIVAAKIGMQRCAASSQWLKERISLSRYAHVPLGNFELDWLLFTADIFFSRALHDQ 682
            ALGWQIVAAKIGMQRCAA++QWL ERISL+RYAHVPLGNFE DWL+FTAD+FFSRAL DQ
Sbjct: 1609 ALGWQIVAAKIGMQRCAAATQWLNERISLARYAHVPLGNFEPDWLIFTADLFFSRALRDQ 1668

Query: 683  QQ 688
            QQ
Sbjct: 1669 QQ 1670



 Score = 67.4 bits (163), Expect = 8e-09
 Identities = 29/47 (61%), Positives = 34/47 (72%)
 Frame = +1

Query: 238  RERHHGPTVGVIECPKLHSLKSEISVLNDFPCVSIPCNASDSQYQVM 378
            R +HHGP V VIECP +H LKS I  L+D PCV+IP NA DS YQ +
Sbjct: 1564 RHQHHGPEVAVIECPNVHLLKSGIRALDDLPCVNIPSNARDSHYQAL 1610


>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
          Length = 2723

 Score =  117 bits (293), Expect = 7e-24
 Identities = 54/62 (87%), Positives = 59/62 (95%)
 Frame = +2

Query: 503  ALGWQIVAAKIGMQRCAASSQWLKERISLSRYAHVPLGNFELDWLLFTADIFFSRALHDQ 682
            ALGWQIVAAKIGMQRCAA++QWL ERISL+RYAHVPLGNFE DWL+FTAD+FFSRAL DQ
Sbjct: 2118 ALGWQIVAAKIGMQRCAAATQWLNERISLARYAHVPLGNFEPDWLIFTADLFFSRALRDQ 2177

Query: 683  QQ 688
            QQ
Sbjct: 2178 QQ 2179



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 29/49 (59%), Positives = 34/49 (69%)
 Frame = +1

Query: 232  ILRERHHGPTVGVIECPKLHSLKSEISVLNDFPCVSIPCNASDSQYQVM 378
            I   +HHGP V VIECP +H LKS I  L+D PCV+IP NA DS YQ +
Sbjct: 2071 IKMHQHHGPEVAVIECPNVHLLKSGIRALDDLPCVNIPSNARDSHYQAL 2119