BLASTX nr result

ID: Coptis25_contig00005678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005678
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277975.1| PREDICTED: uncharacterized protein LOC100246...   121   1e-25
ref|XP_002308428.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002528217.1| conserved hypothetical protein [Ricinus comm...   117   2e-24
gb|AFK48964.1| unknown [Lotus japonicus]                              106   2e-21
ref|NP_001238435.1| uncharacterized protein LOC100306667 [Glycin...   106   3e-21

>ref|XP_002277975.1| PREDICTED: uncharacterized protein LOC100246931 [Vitis vinifera]
           gi|147833080|emb|CAN62085.1| hypothetical protein
           VITISV_035122 [Vitis vinifera]
          Length = 304

 Score =  121 bits (303), Expect = 1e-25
 Identities = 67/132 (50%), Positives = 87/132 (65%), Gaps = 16/132 (12%)
 Frame = -1

Query: 351 SFSGPFCANTSMLRHGPQP----------------PEHMENKIAVQVAEMDRLTRENQKL 220
           SF G       M+RHGP P                P+  ENK+  QVAE++RL  +N +L
Sbjct: 10  SFEGRAAQAPGMMRHGPFPGSGHTVGLRSLETAPHPDIAENKMLAQVAEIERLAGDNHRL 69

Query: 219 GATQVNLRKELLATQQEVQRIQAHIGSIQTESDIQIRLLLEKIRKMEVDIQAGESMKKDV 40
            AT   LR+EL+A Q E+ RI+A I SI+TESDIQIR+L+E+I KME DI+AGE +KK++
Sbjct: 70  AATHGALRQELVAAQHEISRIKAQIRSIETESDIQIRVLMERIAKMEGDIRAGEHVKKEL 129

Query: 39  QQAHKEAQSLIT 4
           QQAH EAQSL+T
Sbjct: 130 QQAHIEAQSLVT 141


>ref|XP_002308428.1| predicted protein [Populus trichocarpa] gi|222854404|gb|EEE91951.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score =  117 bits (293), Expect = 1e-24
 Identities = 60/115 (52%), Positives = 85/115 (73%), Gaps = 11/115 (9%)
 Frame = -1

Query: 318 MLRHGPQPPEH-----------MENKIAVQVAEMDRLTRENQKLGATQVNLRKELLATQQ 172
           M+RHGP P  H           +E++ A Q A++++L  +N +L  + + LR++L A QQ
Sbjct: 21  MMRHGPFPAGHHTSEPLSRSDLLEHRFAAQAADIEQLAGDNNRLVTSHMALREDLAAAQQ 80

Query: 171 EVQRIQAHIGSIQTESDIQIRLLLEKIRKMEVDIQAGESMKKDVQQAHKEAQSLI 7
           EVQR++AHI SIQTESDIQIR+LL+KI KME DI+AGE++KKD++QAH EAQ+L+
Sbjct: 81  EVQRLKAHIRSIQTESDIQIRVLLDKIAKMEKDIRAGENVKKDLKQAHVEAQNLV 135


>ref|XP_002528217.1| conserved hypothetical protein [Ricinus communis]
           gi|223532378|gb|EEF34174.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 312

 Score =  117 bits (292), Expect = 2e-24
 Identities = 60/123 (48%), Positives = 86/123 (69%), Gaps = 11/123 (8%)
 Frame = -1

Query: 342 GPFCANTSMLRHGPQPPEH-----------MENKIAVQVAEMDRLTRENQKLGATQVNLR 196
           G +      +RHG  PP H           +ENKIA Q AE+++L  +N +L AT + LR
Sbjct: 13  GRYLRRPESIRHGLFPPSHRQLDRLPPSDLLENKIAAQAAEIEQLAGDNHRLAATHMALR 72

Query: 195 KELLATQQEVQRIQAHIGSIQTESDIQIRLLLEKIRKMEVDIQAGESMKKDVQQAHKEAQ 16
           ++L+  QQEV+R +AHI SIQTESDIQ+R+LL+KI KME +I+ G+++KK+++QAH EAQ
Sbjct: 73  QDLVDAQQEVKRRKAHIRSIQTESDIQMRMLLDKIAKMEAEIRLGDNVKKELRQAHMEAQ 132

Query: 15  SLI 7
           SL+
Sbjct: 133 SLV 135


>gb|AFK48964.1| unknown [Lotus japonicus]
          Length = 205

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/97 (56%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
 Frame = -1

Query: 297 PPEHM-ENKIAVQVAEMDRLTRENQKLGATQVNLRKELLATQQEVQRIQAHIGSIQTESD 121
           P  H+ E+K+A Q  E++RL  +N++L  T V LR +L++  Q+VQ++++HI SIQTESD
Sbjct: 53  PQSHLLEDKVADQEEEIERLAGDNRRLAKTHVALRDDLVSAAQDVQKLKSHIRSIQTESD 112

Query: 120 IQIRLLLEKIRKMEVDIQAGESMKKDVQQAHKEAQSL 10
           IQIR+LL+KI KMEVDI+AG+S++KD+QQA  EAQSL
Sbjct: 113 IQIRVLLDKITKMEVDIRAGDSVRKDLQQALIEAQSL 149


>ref|NP_001238435.1| uncharacterized protein LOC100306667 [Glycine max]
           gi|255629223|gb|ACU14956.1| unknown [Glycine max]
          Length = 173

 Score =  106 bits (264), Expect = 3e-21
 Identities = 53/95 (55%), Positives = 77/95 (81%)
 Frame = -1

Query: 294 PEHMENKIAVQVAEMDRLTRENQKLGATQVNLRKELLATQQEVQRIQAHIGSIQTESDIQ 115
           P+ +ENKIA Q +E+++L  +N+ L +  V LR+ L+A  Q+VQ++++HI SIQTESDIQ
Sbjct: 23  PQLLENKIAAQESEIEQLVSDNRGLASGHVALREALVAAAQDVQKLKSHIRSIQTESDIQ 82

Query: 114 IRLLLEKIRKMEVDIQAGESMKKDVQQAHKEAQSL 10
           IR+L++KI K EVDI+A +S+KKD+Q+AH EAQSL
Sbjct: 83  IRILVDKISKGEVDIRASDSVKKDLQKAHIEAQSL 117


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