BLASTX nr result

ID: Coptis25_contig00005673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005673
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34582.3| unnamed protein product [Vitis vinifera]               78   8e-13
ref|XP_002280223.1| PREDICTED: GTPase-activating protein gyp7-li...    78   8e-13
ref|XP_002280252.2| PREDICTED: GTPase-activating protein gyp7-li...    77   1e-12
ref|XP_004165024.1| PREDICTED: uncharacterized protein LOC101230...    77   1e-12
ref|XP_004146240.1| PREDICTED: GTPase-activating protein gyp7-li...    77   1e-12

>emb|CBI34582.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 35/47 (74%), Positives = 42/47 (89%)
 Frame = -3

Query: 447 EMGSLKSPWSRRRRKNALSHQQWRNLFTTEGKFGDGGVKFLKKVRSG 307
           + G+LKSPWSRRRRK+AL  +QW++LFT +GKF DGGVKFLKKVRSG
Sbjct: 56  DRGTLKSPWSRRRRKHALLAKQWKSLFTPDGKFTDGGVKFLKKVRSG 102


>ref|XP_002280223.1| PREDICTED: GTPase-activating protein gyp7-like isoform 1 [Vitis
           vinifera]
          Length = 554

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 35/47 (74%), Positives = 42/47 (89%)
 Frame = -3

Query: 447 EMGSLKSPWSRRRRKNALSHQQWRNLFTTEGKFGDGGVKFLKKVRSG 307
           + G+LKSPWSRRRRK+AL  +QW++LFT +GKF DGGVKFLKKVRSG
Sbjct: 56  DRGTLKSPWSRRRRKHALLAKQWKSLFTPDGKFTDGGVKFLKKVRSG 102


>ref|XP_002280252.2| PREDICTED: GTPase-activating protein gyp7-like isoform 3 [Vitis
           vinifera]
          Length = 591

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/45 (77%), Positives = 41/45 (91%)
 Frame = -3

Query: 441 GSLKSPWSRRRRKNALSHQQWRNLFTTEGKFGDGGVKFLKKVRSG 307
           G+LKSPWSRRRRK+AL  +QW++LFT +GKF DGGVKFLKKVRSG
Sbjct: 95  GTLKSPWSRRRRKHALLAKQWKSLFTPDGKFTDGGVKFLKKVRSG 139


>ref|XP_004165024.1| PREDICTED: uncharacterized protein LOC101230658 [Cucumis sativus]
          Length = 577

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 34/47 (72%), Positives = 41/47 (87%)
 Frame = -3

Query: 447 EMGSLKSPWSRRRRKNALSHQQWRNLFTTEGKFGDGGVKFLKKVRSG 307
           + G LKSPWSR++RK+ALS QQWR+LFT +GK  DGG+KFLKKVRSG
Sbjct: 78  DRGRLKSPWSRKKRKHALSPQQWRSLFTPDGKLRDGGIKFLKKVRSG 124


>ref|XP_004146240.1| PREDICTED: GTPase-activating protein gyp7-like [Cucumis sativus]
          Length = 576

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 34/47 (72%), Positives = 41/47 (87%)
 Frame = -3

Query: 447 EMGSLKSPWSRRRRKNALSHQQWRNLFTTEGKFGDGGVKFLKKVRSG 307
           + G LKSPWSR++RK+ALS QQWR+LFT +GK  DGG+KFLKKVRSG
Sbjct: 77  DRGRLKSPWSRKKRKHALSPQQWRSLFTPDGKLRDGGIKFLKKVRSG 123


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