BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005665
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vin...   120   4e-48
gb|ABK25331.1| unknown [Picea sitchensis] gi|224284327|gb|ACN398...   115   2e-42
gb|ABB91897.1| Y14 protein [Taiwania cryptomerioides]                 113   8e-42
ref|XP_002513523.1| polyadenylate-binding protein, putative [Ric...   117   2e-41
ref|XP_004139049.1| PREDICTED: RNA-binding protein 8A-like [Cucu...   114   8e-41

>ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vinifera]
           gi|296088561|emb|CBI37552.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score =  120 bits (300), Expect(3) = 4e-48
 Identities = 57/61 (93%), Positives = 58/61 (95%)
 Frame = +2

Query: 479 LFSDGAPGPQRSIEGWIILVTGVHEEAQEDDLQNHFGEYGEVKNLHLNLDRRTGFVKGYA 658
           L SDG PGPQRSIEGWIILVTGVHEEAQEDDLQN FGE+GEVKNLHLNLDRRTGFVKGYA
Sbjct: 83  LDSDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEVKNLHLNLDRRTGFVKGYA 142

Query: 659 L 661
           L
Sbjct: 143 L 143



 Score = 63.5 bits (153), Expect(3) = 4e-48
 Identities = 31/42 (73%), Positives = 34/42 (80%)
 Frame = +3

Query: 738 EYERFEEAQTAISESNGVDLLGQTLSVDWAFSNGPFFKKRNM 863
           EYE  EEAQ AIS  NG +LL QT+SVDWAFSNGP FK+RNM
Sbjct: 145 EYENLEEAQAAISAMNGTELLTQTISVDWAFSNGP-FKRRNM 185



 Score = 55.8 bits (133), Expect(3) = 4e-48
 Identities = 42/123 (34%), Positives = 51/123 (41%)
 Frame = +3

Query: 42  MAATDVEAVDFXXXXXXXXXXXGGAAIDIIDPXXXXXXXXXXXXXXXLPKLKSAITGGXX 221
           MA+ DVEAVDF           G   +D   P               LPKLKSAITGG  
Sbjct: 1   MASADVEAVDFEPEDDDLMDEDGAVDVDNSSPRAP------------LPKLKSAITGGAP 48

Query: 222 XXXXXXXXXXXXXXXXXXXXXXXXXXXVVTAPPPRKTKGRGFREEISNNAERNNRFGGKD 401
                                         A  P+KTKGRGFR++   +A+RN+RF  +D
Sbjct: 49  SSL---------------------------AAAPKKTKGRGFRDD--TDADRNSRFAARD 79

Query: 402 FDS 410
           FDS
Sbjct: 80  FDS 82


>gb|ABK25331.1| unknown [Picea sitchensis] gi|224284327|gb|ACN39899.1| unknown
           [Picea sitchensis]
          Length = 205

 Score =  115 bits (287), Expect(3) = 2e-42
 Identities = 54/61 (88%), Positives = 56/61 (91%)
 Frame = +2

Query: 479 LFSDGAPGPQRSIEGWIILVTGVHEEAQEDDLQNHFGEYGEVKNLHLNLDRRTGFVKGYA 658
           L SDG PGPQRSIEGWIILVTGVHEEAQEDDL   FGE+GE+KNLHLNLDRRTGFVKGYA
Sbjct: 84  LDSDGGPGPQRSIEGWIILVTGVHEEAQEDDLHELFGEFGEIKNLHLNLDRRTGFVKGYA 143

Query: 659 L 661
           L
Sbjct: 144 L 144



 Score = 60.1 bits (144), Expect(3) = 2e-42
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = +3

Query: 738 EYERFEEAQTAISESNGVDLLGQTLSVDWAFSNGPFFKK 854
           EYE F+EAQ AI+  NG +LL QT+SVDWAFSNGPF +K
Sbjct: 146 EYETFKEAQAAITNLNGAELLTQTISVDWAFSNGPFRRK 184



 Score = 45.4 bits (106), Expect(3) = 2e-42
 Identities = 37/123 (30%), Positives = 47/123 (38%)
 Frame = +3

Query: 42  MAATDVEAVDFXXXXXXXXXXXGGAAIDIIDPXXXXXXXXXXXXXXXLPKLKSAITGGXX 221
           MA  +V+AVDF                D++D                 PKLKS ITGG  
Sbjct: 1   MAGAEVDAVDFEPEED-----------DLMDDDTAMDDGNADAVPTPAPKLKSTITGGTS 49

Query: 222 XXXXXXXXXXXXXXXXXXXXXXXXXXXVVTAPPPRKTKGRGFREEISNNAERNNRFGGKD 401
                                            P+KTKGRGFREE   +AERN+RF  ++
Sbjct: 50  QLGDGG---------------------------PKKTKGRGFREE--TDAERNSRFAARE 80

Query: 402 FDS 410
           F+S
Sbjct: 81  FES 83


>gb|ABB91897.1| Y14 protein [Taiwania cryptomerioides]
          Length = 216

 Score =  113 bits (282), Expect(3) = 8e-42
 Identities = 54/61 (88%), Positives = 56/61 (91%)
 Frame = +2

Query: 479 LFSDGAPGPQRSIEGWIILVTGVHEEAQEDDLQNHFGEYGEVKNLHLNLDRRTGFVKGYA 658
           L SDG PGPQRSIEGWIILVTGVHEEAQE DLQ  FGE+GE+KNLHLNLDRRTGFVKGYA
Sbjct: 95  LNSDGGPGPQRSIEGWIILVTGVHEEAQEVDLQELFGEHGEIKNLHLNLDRRTGFVKGYA 154

Query: 659 L 661
           L
Sbjct: 155 L 155



 Score = 60.5 bits (145), Expect(3) = 8e-42
 Identities = 27/41 (65%), Positives = 31/41 (75%)
 Frame = +3

Query: 738 EYERFEEAQTAISESNGVDLLGQTLSVDWAFSNGPFFKKRN 860
           EYE F EAQ AI   NG +LL QT+SVDWAFSNGPF ++ N
Sbjct: 157 EYETFNEAQAAIENLNGAELLTQTISVDWAFSNGPFRRRNN 197



 Score = 44.7 bits (104), Expect(3) = 8e-42
 Identities = 21/31 (67%), Positives = 24/31 (77%)
 Frame = +3

Query: 318 PPRKTKGRGFREEISNNAERNNRFGGKDFDS 410
           PP+KTKGRGFREE   + ERN RF  +DFDS
Sbjct: 66  PPKKTKGRGFREE--TDFERNTRFTARDFDS 94


>ref|XP_002513523.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223547431|gb|EEF48926.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 199

 Score =  117 bits (293), Expect(3) = 2e-41
 Identities = 54/61 (88%), Positives = 58/61 (95%)
 Frame = +2

Query: 479 LFSDGAPGPQRSIEGWIILVTGVHEEAQEDDLQNHFGEYGEVKNLHLNLDRRTGFVKGYA 658
           L +DG PGPQRSIEGWIILVTGVHEEAQEDDLQN FG++GE+KNLHLNLDRRTGFVKGYA
Sbjct: 82  LGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGFVKGYA 141

Query: 659 L 661
           L
Sbjct: 142 L 142



 Score = 55.8 bits (133), Expect(3) = 2e-41
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +3

Query: 738 EYERFEEAQTAISESNGVDLLGQTLSVDWAFSNGPFFKKRNM 863
           EYE+FEEAQ AI+  NG +LL Q ++VDWAF NGP  K++NM
Sbjct: 144 EYEKFEEAQNAIASLNGTELLTQIINVDWAFCNGP-TKRKNM 184



 Score = 43.9 bits (102), Expect(3) = 2e-41
 Identities = 41/124 (33%), Positives = 45/124 (36%), Gaps = 1/124 (0%)
 Frame = +3

Query: 42  MAATDVEAVDFXXXXXXXXXXXGGAAIDIIDPXXXXXXXXXXXXXXXLPKLKSAITGGXX 221
           MA  D EAVDF           GG   D                   LPKLKSAITGG  
Sbjct: 1   MANADAEAVDFEPEEDDLMDEDGGVDADA-------------SPRAPLPKLKSAITGGAA 47

Query: 222 XXXXXXXXXXXXXXXXXXXXXXXXXXXVVTAPPPRKTKGRGFREEISNNAERNNRFGGK- 398
                                        +   PRKTKGRGFREE   +A+R  R   + 
Sbjct: 48  S----------------------------SLSAPRKTKGRGFREEA--DADRQTRLASRG 77

Query: 399 DFDS 410
           DFDS
Sbjct: 78  DFDS 81


>ref|XP_004139049.1| PREDICTED: RNA-binding protein 8A-like [Cucumis sativus]
          Length = 197

 Score =  114 bits (284), Expect(3) = 8e-41
 Identities = 54/61 (88%), Positives = 56/61 (91%)
 Frame = +2

Query: 479 LFSDGAPGPQRSIEGWIILVTGVHEEAQEDDLQNHFGEYGEVKNLHLNLDRRTGFVKGYA 658
           L S   PGPQRSIEGWIILVTGVHEEAQEDDLQN FGE+GE+KNLHLNLDRRTGFVKGYA
Sbjct: 80  LKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYA 139

Query: 659 L 661
           L
Sbjct: 140 L 140



 Score = 51.6 bits (122), Expect(3) = 8e-41
 Identities = 23/39 (58%), Positives = 30/39 (76%)
 Frame = +3

Query: 738 EYERFEEAQTAISESNGVDLLGQTLSVDWAFSNGPFFKK 854
           EYE FEEA+ AIS  +G +LL Q ++VDWAFS+GP  +K
Sbjct: 142 EYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK 180



 Score = 49.3 bits (116), Expect(3) = 8e-41
 Identities = 41/123 (33%), Positives = 45/123 (36%)
 Frame = +3

Query: 42  MAATDVEAVDFXXXXXXXXXXXGGAAIDIIDPXXXXXXXXXXXXXXXLPKLKSAITGGXX 221
           MA+ DVEAVDF           G A  D                    PKLKSAITGG  
Sbjct: 1   MASADVEAVDFEPEEDDLMDEDGAAEADA-------------SPRAPFPKLKSAITGGAS 47

Query: 222 XXXXXXXXXXXXXXXXXXXXXXXXXXXVVTAPPPRKTKGRGFREEISNNAERNNRFGGKD 401
                                            P+KTKGRGFREE    ++RN R  G D
Sbjct: 48  SSLSGG---------------------------PKKTKGRGFREE----SDRNTRLAGSD 76

Query: 402 FDS 410
           FDS
Sbjct: 77  FDS 79