BLASTX nr result
ID: Coptis25_contig00005653
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00005653
(3392 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003588355.1| Mitochondrial protein, putative [Medicago tr... 325 1e-94
ref|XP_003608262.1| hypothetical protein MTR_4g091430 [Medicago ... 218 2e-66
ref|ZP_01227369.1| conserved hypothetical protein [Aurantimonas ... 158 2e-42
ref|ZP_05069441.1| cell wall-associated hydrolase [Candidatus Pe... 158 2e-41
ref|ZP_05839398.1| cell wall-associated hydrolase [Brucella suis... 158 2e-41
>ref|XP_003588355.1| Mitochondrial protein, putative [Medicago truncatula]
gi|355477403|gb|AES58606.1| Mitochondrial protein,
putative [Medicago truncatula]
Length = 1106
Score = 325 bits (834), Expect(2) = 1e-94
Identities = 164/191 (85%), Positives = 164/191 (85%)
Frame = +1
Query: 811 PLVLRIFTENSISPGPCRRQRGSRYTIRAGRYLCDKEFRYLRTVRVTAAVYRGFHSKLIT 990
PLVLRIFTENSISPGPCRRQRGSRYTIRAGRYLCDKEFRYLRTVRVTAAVYRGFHSKLIT
Sbjct: 517 PLVLRIFTENSISPGPCRRQRGSRYTIRAGRYLCDKEFRYLRTVRVTAAVYRGFHSKLIT 576
Query: 991 LLLPTFQHRAGVRLYTSCYHLAESCVFNKQSLPPGMCRFPNQKIGEHPFSRSYGVILPSS 1170
LLLPTFQHRAGVRLYTSCYHLAESCVFNKQSLPPGMCRFPNQKIGEHPFSRSYGVILPSS
Sbjct: 577 LLLPTFQHRAGVRLYTSCYHLAESCVFNKQSLPPGMCRFPNQKIGEHPFSRSYGVILPSS 636
Query: 1171 FDMVLSSALVYSTCSPVSVWGTVSSPGGSPSQFEVFSWKFQPC*L*QQSRL*TDSRLWQG 1350
FDMVLSSALVYSTCSPVSVWGTVSSPGGSPSQFE G
Sbjct: 637 FDMVLSSALVYSTCSPVSVWGTVSSPGGSPSQFE-------------------------G 671
Query: 1351 SKLCSLATPTL 1383
LCSLATPTL
Sbjct: 672 GTLCSLATPTL 682
Score = 50.8 bits (120), Expect(2) = 1e-94
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +3
Query: 696 EWSFRIGRCVSPPPTYPTHSIKVVT 770
+WSFRIGR VS PPTYPTHSIKVVT
Sbjct: 492 KWSFRIGRSVSSPPTYPTHSIKVVT 516
Score = 152 bits (384), Expect(4) = 8e-88
Identities = 72/81 (88%), Positives = 73/81 (90%)
Frame = +3
Query: 3018 FFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSDQNSNTPRFTGKDRTMGTNLQGYHLLWPD 3197
FFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSDQNSNTPRFTGKDRTMGTNLQG HLLWPD
Sbjct: 886 FFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSDQNSNTPRFTGKDRTMGTNLQGSHLLWPD 945
Query: 3198 LPTFSQLQFTARVGFEAVACC 3260
LPTFSQLQFTA F+ C
Sbjct: 946 LPTFSQLQFTA--PFKCAGAC 964
Score = 139 bits (349), Expect(4) = 8e-88
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +2
Query: 2564 IRSFPGVGKAKWGHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPH 2743
+ SFPGVGKAKWGHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPH
Sbjct: 800 LSSFPGVGKAKWGHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPH 859
Query: 2744 TWVRSSKA 2767
TWVRSSKA
Sbjct: 860 TWVRSSKA 867
Score = 58.5 bits (140), Expect(4) = 8e-88
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 3262 CWFFHHPIHNKSNETWRKIS*HFAEEQ 3342
CWFFHHPIHNKSNETWRK S HFA E+
Sbjct: 964 CWFFHHPIHNKSNETWRKRSEHFAAEE 990
Score = 46.2 bits (108), Expect(4) = 8e-88
Identities = 21/26 (80%), Positives = 21/26 (80%), Gaps = 4/26 (15%)
Frame = +1
Query: 2842 HLW----KAPTPNGLSRCSHFLADPS 2907
H W KAPTPNGLSRCSHFLADPS
Sbjct: 859 HTWVRSSKAPTPNGLSRCSHFLADPS 884
Score = 147 bits (372), Expect = 1e-32
Identities = 78/113 (69%), Positives = 83/113 (73%)
Frame = +2
Query: 320 NRTLGTFFNPRM**VDIEVPNDSVDKSSWESSACYPRRTFDPLSESPSTRDSRITMADFR 499
NRT+ P +DIEVPNDSVDKSSWESSACYPRRTFDPLSESPSTRDSRITMADFR
Sbjct: 410 NRTVSRRSKPNS--LDIEVPNDSVDKSSWESSACYPRRTFDPLSESPSTRDSRITMADFR 467
Query: 500 LCSTSRSHSQAGLYHYAHEQNLSLSLPSHTSVTL*EASAPDKLPTSQCPAPPP 658
LCSTSRSHSQAGLYHYAHEQNLSL ++ S+P PT P
Sbjct: 468 LCSTSRSHSQAGLYHYAHEQNLSLKWSFRIGRSV---SSPPTYPTHSIKVVTP 517
Score = 135 bits (339), Expect = 1e-28
Identities = 81/140 (57%), Positives = 82/140 (58%)
Frame = +3
Query: 2019 RSSNSLQQTGMVQ*SKQLRHFRVPIGRQPXXXXXXXXXXXXXXXXXXKPSTGRRSCFSQD 2198
R S G V+ SKQLRHFRVPIGRQP KPSTGRRSCFSQD
Sbjct: 693 RQSRRATGPGRVRKSKQLRHFRVPIGRQPFRGFLRDRLTLRRLTERRKPSTGRRSCFSQD 752
Query: 2199 FSLLMSAFSLLISPGVVTKNLPRLTERPATDT*KSSFQGLVASVNHLSPDTFSVPWS*TS 2378
SLLMSAFSLLISPGVVTKNLPRLTERP TS
Sbjct: 753 LSLLMSAFSLLISPGVVTKNLPRLTERP------------------------------TS 782
Query: 2379 ELLRFLQRMAASKPTSWLSS 2438
ELLRFLQRMAASKPTSWLSS
Sbjct: 783 ELLRFLQRMAASKPTSWLSS 802
Score = 114 bits (284), Expect = 2e-22
Identities = 62/97 (63%), Positives = 63/97 (64%)
Frame = +1
Query: 7 FRLVRDRFTPRGAYTSRLSKFCSKTSYENLYREGFPAAQQFFHTNLAARRCYWHNNRYTI 186
FRLVRDRFTPRGAYTSRLSKFCSKTS+ENLYREGFP
Sbjct: 359 FRLVRDRFTPRGAYTSRLSKFCSKTSFENLYREGFP------------------------ 394
Query: 187 GWPNPVLSY*GWLLAVLPLTPTVDRNRTVSRRSKPNS 297
GWLLAVLPLTPTVDRNRTVSRRSKPNS
Sbjct: 395 ----------GWLLAVLPLTPTVDRNRTVSRRSKPNS 421
>ref|XP_003608262.1| hypothetical protein MTR_4g091430 [Medicago truncatula]
gi|355509317|gb|AES90459.1| hypothetical protein
MTR_4g091430 [Medicago truncatula]
Length = 167
Score = 218 bits (556), Expect(2) = 2e-66
Identities = 104/109 (95%), Positives = 105/109 (96%)
Frame = +1
Query: 811 PLVLRIFTENSISPGPCRRQRGSRYTIRAGRYLCDKEFRYLRTVRVTAAVYRGFHSKLIT 990
PLVLRIFTENSISPGPCRRQRGSRYTIRAGRYLCDKEFRYLR VRVT AVYRGFHSKLIT
Sbjct: 44 PLVLRIFTENSISPGPCRRQRGSRYTIRAGRYLCDKEFRYLRKVRVTIAVYRGFHSKLIT 103
Query: 991 LLLPTFQHRAGVRLYTSCYHLAESCVFNKQSLPPGMCRFPNQKIGEHPF 1137
LLLPTFQHRAGVRLYTSCYHLAESCVFNKQSLPPGMCRFPNQKIG+ F
Sbjct: 104 LLLPTFQHRAGVRLYTSCYHLAESCVFNKQSLPPGMCRFPNQKIGDLSF 152
Score = 63.5 bits (153), Expect(2) = 2e-66
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +3
Query: 660 MIGAAVRHP*TKEWSFRIGRCVSPPPTYPTHSIKVVT 770
+ AV+HP TKEWSFRIGR V+ PPTYPTHSIKVVT
Sbjct: 7 LANVAVKHPYTKEWSFRIGRSVTSPPTYPTHSIKVVT 43
>ref|ZP_01227369.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1] gi|90336396|gb|EAS50137.1| conserved
hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 152
Score = 158 bits (400), Expect(2) = 2e-42
Identities = 81/105 (77%), Positives = 87/105 (82%)
Frame = +1
Query: 247 PTVDRNRTVSRRSKPNSRTT*IGEQPNPWDLLQPQDVMSRHRGAKRLRR*ELLGVISLLS 426
PT DR+RTVSRRS+P+SRT IGEQPNPWDLLQPQD MSRHRGAK+ RR LLGVISLLS
Sbjct: 44 PTADRDRTVSRRSEPSSRTALIGEQPNPWDLLQPQDAMSRHRGAKQPRRYGLLGVISLLS 103
Query: 427 PAYL*SVEREPFHTGLPDHYGRLSSLFDQSVSQSGRLIPLRSRAE 561
PAYL SVER PFH G PDHY RLSSL D SVSQSG L+PL S +
Sbjct: 104 PAYLLSVERWPFHAGPPDHYDRLSSLLDLSVSQSGGLMPLHSTTD 148
Score = 43.9 bits (102), Expect(2) = 2e-42
Identities = 25/46 (54%), Positives = 28/46 (60%)
Frame = +3
Query: 120 AAVLPYQLSCPALLLA*QPVHHRLAQPSPLVLGLAPRSSPFNTNGR 257
+AV+P S PAL LA Q VH R QP PLVLG P +SP T R
Sbjct: 3 SAVIPTVHSYPALRLAPQQVHQRYVQPGPLVLGSDPVNSPAPTADR 48
>ref|ZP_05069441.1| cell wall-associated hydrolase [Candidatus Pelagibacter sp.
HTCC7211] gi|207083014|gb|EDZ60440.1| cell
wall-associated hydrolase [Candidatus Pelagibacter sp.
HTCC7211]
Length = 149
Score = 158 bits (400), Expect(2) = 2e-41
Identities = 82/103 (79%), Positives = 87/103 (84%)
Frame = +1
Query: 244 TPTVDRNRTVSRRSKPNSRTT*IGEQPNPWDLLQPQDVMSRHRGAKRLRR*ELLGVISLL 423
T DR+RTVSRRS+P+SRTT IGEQPNPWDLLQPQDVMSRHRGAK RR ELLG ISLL
Sbjct: 43 TRIADRDRTVSRRSEPSSRTTLIGEQPNPWDLLQPQDVMSRHRGAKHCRRYELLGSISLL 102
Query: 424 SPAYL*SVEREPFHTGLPDHYGRLSSLFDQSVSQSGRLIPLRS 552
SPAYL SVER PFH+ PDHY RLSSL D SVSQSGRL+PL S
Sbjct: 103 SPAYLLSVERWPFHSEPPDHYDRLSSLLDLSVSQSGRLMPLHS 145
Score = 40.4 bits (93), Expect(2) = 2e-41
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = +3
Query: 120 AAVLPYQLSCPALLLA*QPVHHRLAQPSPLVLGLAPRSS 236
+AV+ LS PAL LA QPVH QP PLVLG P +S
Sbjct: 3 SAVISSILSYPALQLALQPVHQWYVQPGPLVLGSTPLNS 41
>ref|ZP_05839398.1| cell wall-associated hydrolase [Brucella suis bv. 4 str. 40]
gi|260154117|gb|EEW89200.1| cell wall-associated
hydrolase [Brucella suis bv. 4 str. 40]
Length = 152
Score = 158 bits (400), Expect(2) = 2e-41
Identities = 82/103 (79%), Positives = 85/103 (82%)
Frame = +1
Query: 244 TPTVDRNRTVSRRSKPNSRTT*IGEQPNPWDLLQPQDVMSRHRGAKRLRR*ELLGVISLL 423
TPT DRNRTVSRRS+PNSRT GEQP PWDLLQPQD MSRHRGAK+ RR LLGVISLL
Sbjct: 43 TPTADRNRTVSRRSEPNSRTALNGEQPYPWDLLQPQDAMSRHRGAKQPRRYGLLGVISLL 102
Query: 424 SPAYL*SVEREPFHTGLPDHYGRLSSLFDQSVSQSGRLIPLRS 552
SPAYL SVER PFH G PDHY RLSSL D SV QSGRL+PL S
Sbjct: 103 SPAYLLSVERWPFHAGPPDHYDRLSSLLDLSVLQSGRLMPLHS 145
Score = 40.0 bits (92), Expect(2) = 2e-41
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = +3
Query: 120 AAVLPYQLSCPALLLA*QPVHHRLAQPSPLVLGLAPRSSPFNTNGR 257
+AV+P S PA+ LA Q VH R P PLVLG P + P T R
Sbjct: 3 SAVIPSVYSYPAMRLAPQQVHQRYVHPGPLVLGTDPVNIPTPTADR 48