BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005648
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21880.3| unnamed protein product [Vitis vinifera]              122   6e-26
ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|2...   122   6e-26
ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|2...   122   1e-25
ref|XP_003564395.1| PREDICTED: putative E3 ubiquitin-protein lig...   120   2e-25
ref|XP_002863599.1| predicted protein [Arabidopsis lyrata subsp....   120   2e-25

>emb|CBI21880.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score =  122 bits (307), Expect = 6e-26
 Identities = 58/129 (44%), Positives = 83/129 (64%)
 Frame = +3

Query: 87  SEEVVLLTTRVKVRYVEVNLVAVRKPFECPICLGIMKETRTLQDCMHRFCRDCIEKEMGL 266
           S+E    +T  K  +V V L  +RK  +CPICLGI+K+TRT+ +C+HRFCR+CI+K M L
Sbjct: 153 SDENPSSSTEEKPEFVFVGLPDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRL 212

Query: 267 GNNECPVCHVRIESRSSLREDIRYNKMILALFGEVEKNEEQAPVPDKDKSVRGKQVQNEG 446
           GNNECP C     SR SLR+D  Y+ +I AL+ +++K EE+     +++  R KQ+Q   
Sbjct: 213 GNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFHEEEQTRNKQIQASI 272

Query: 447 CQSNQGSNE 473
            Q  Q  +E
Sbjct: 273 AQILQRQSE 281


>ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|222870857|gb|EEF07988.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  122 bits (307), Expect = 6e-26
 Identities = 53/107 (49%), Positives = 75/107 (70%)
 Frame = +3

Query: 117 VKVRYVEVNLVAVRKPFECPICLGIMKETRTLQDCMHRFCRDCIEKEMGLGNNECPVCHV 296
           VK  YV V L  +RK  +CPICLGI+++TRT+ +C+HRFCR+CI+K M LGNNECP C  
Sbjct: 61  VKEEYVVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 120

Query: 297 RIESRSSLREDIRYNKMILALFGEVEKNEEQAPVPDKDKSVRGKQVQ 437
              SR SLR+D  Y+ +I AL+ +++K EE+     +D+  R K++Q
Sbjct: 121 HCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFQEDEKARNKEIQ 167


>ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|222848746|gb|EEE86293.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score =  122 bits (305), Expect = 1e-25
 Identities = 53/107 (49%), Positives = 75/107 (70%)
 Frame = +3

Query: 117 VKVRYVEVNLVAVRKPFECPICLGIMKETRTLQDCMHRFCRDCIEKEMGLGNNECPVCHV 296
           VK  YV V L  +RK  +CPICLGI+++TRT+ +C+HRFCR+CI+K M LGNNECP C  
Sbjct: 72  VKEEYVVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 131

Query: 297 RIESRSSLREDIRYNKMILALFGEVEKNEEQAPVPDKDKSVRGKQVQ 437
              SR SLR+D  Y+ +I AL+ +++K EE+     +++  R KQ+Q
Sbjct: 132 HCASRRSLRDDPNYDALISALYPDIDKYEEEELAFQEEEKARNKQIQ 178


>ref|XP_003564395.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
           [Brachypodium distachyon]
          Length = 481

 Score =  120 bits (302), Expect = 2e-25
 Identities = 57/145 (39%), Positives = 87/145 (60%)
 Frame = +3

Query: 3   GSYRSRTTMGWEPHCFIFVSDF*EFRCFSEEVVLLTTRVKVRYVEVNLVAVRKPFECPIC 182
           G+  +R T    PH  +  S       +S+     +T     ++ V L  +RK F+CPIC
Sbjct: 49  GAAANRATDPKPPHSGLTDSGSSSGGAYSDSESSESTEDVDEFILVKLAEIRKEFQCPIC 108

Query: 183 LGIMKETRTLQDCMHRFCRDCIEKEMGLGNNECPVCHVRIESRSSLREDIRYNKMILALF 362
           LGI+++TRT+ +C+HRFCRDCI+K M LGNNECP C     SR SLR+D  Y+ +I  L+
Sbjct: 109 LGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIATLY 168

Query: 363 GEVEKNEEQAPVPDKDKSVRGKQVQ 437
            +++K EE+     +++  R K++Q
Sbjct: 169 PDIDKYEEEELAFSEEEKTRNKKIQ 193


>ref|XP_002863599.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309434|gb|EFH39858.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 516

 Score =  120 bits (302), Expect = 2e-25
 Identities = 53/115 (46%), Positives = 79/115 (68%)
 Frame = +3

Query: 129 YVEVNLVAVRKPFECPICLGIMKETRTLQDCMHRFCRDCIEKEMGLGNNECPVCHVRIES 308
           ++E++L  +RK  +CPICLGI+K+TRT+ +C+HRFCR+CI+K M LGNNECP C     S
Sbjct: 117 FMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRKHCAS 176

Query: 309 RSSLREDIRYNKMILALFGEVEKNEEQAPVPDKDKSVRGKQVQNEGCQSNQGSNE 473
           R SLR+D +++ +I ALF  ++  EE+     +D+  R KQ+Q    Q +Q  +E
Sbjct: 177 RRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEMARNKQIQASIAQISQRQSE 231