BLASTX nr result
ID: Coptis25_contig00005638
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00005638
(968 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO85557.1| photosystem I subunit XI [Nicotiana attenuata] 195 3e-75
ref|XP_002527284.1| Photosystem I reaction center subunit XI, ch... 182 7e-74
ref|XP_002303024.1| predicted protein [Populus trichocarpa] gi|2... 177 1e-71
ref|XP_002320562.1| hypothetical protein POPTRDRAFT_732598 [Popu... 178 3e-71
ref|NP_001236868.1| uncharacterized protein LOC100527240 [Glycin... 169 5e-69
>gb|AAO85557.1| photosystem I subunit XI [Nicotiana attenuata]
Length = 220
Score = 195 bits (496), Expect(2) = 3e-75
Identities = 94/112 (83%), Positives = 104/112 (92%), Gaps = 2/112 (1%)
Frame = -1
Query: 791 AASPIASQLKSNFASSITRG--LVSPKGISGAPFKVLPSRRRSCFIVKAIQADKPTYQVV 618
AASP+ASQLKS FASS+TRG LV+PKGISG+PFK+ PS R+SCF +KA+Q DKPTYQV+
Sbjct: 4 AASPMASQLKSKFASSLTRGSGLVTPKGISGSPFKIFPSTRKSCFTIKAVQTDKPTYQVI 63
Query: 617 QPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFL 462
QP+NGDPFIGSLETPVTSSPLIAWYLSNLP YRTAVNPLLRGVEVGLAHGFL
Sbjct: 64 QPLNGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFL 115
Score = 114 bits (284), Expect(2) = 3e-75
Identities = 55/72 (76%), Positives = 61/72 (84%)
Frame = -2
Query: 340 ICLTIYGIASFNEGEPSTAPALTLTGRKKEPDQLQTADGWAKXXXXXXXXGISGVTWAFF 161
+CLTIYGI+SF EGE STAPALTLTGRKK PDQLQTA+GW+K GISGVTWA+F
Sbjct: 149 MCLTIYGISSFKEGEASTAPALTLTGRKKVPDQLQTAEGWSKFTGGFFFGGISGVTWAYF 208
Query: 160 LLYVLNLPYYVK 125
LLYVL+LPYYVK
Sbjct: 209 LLYVLDLPYYVK 220
>ref|XP_002527284.1| Photosystem I reaction center subunit XI, chloroplast precursor,
putative [Ricinus communis] gi|223533377|gb|EEF35128.1|
Photosystem I reaction center subunit XI, chloroplast
precursor, putative [Ricinus communis]
Length = 218
Score = 182 bits (462), Expect(2) = 7e-74
Identities = 87/109 (79%), Positives = 101/109 (92%)
Frame = -1
Query: 788 ASPIASQLKSNFASSITRGLVSPKGISGAPFKVLPSRRRSCFIVKAIQADKPTYQVVQPI 609
ASP+ASQLKS+FASS+TRGL P+GISG PF+V P++R + F VKAIQ++KPT+QV+QPI
Sbjct: 5 ASPMASQLKSSFASSVTRGLGVPRGISGNPFRVSPAKRATSFTVKAIQSEKPTFQVIQPI 64
Query: 608 NGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFL 462
NGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGFL
Sbjct: 65 NGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFL 113
Score = 122 bits (306), Expect(2) = 7e-74
Identities = 58/72 (80%), Positives = 63/72 (87%)
Frame = -2
Query: 340 ICLTIYGIASFNEGEPSTAPALTLTGRKKEPDQLQTADGWAKXXXXXXXXGISGVTWAFF 161
ICLT+YG+ASFNEGEPSTAP+LTLTGRKKEPDQLQTADGWAK GISGV WA+F
Sbjct: 147 ICLTMYGVASFNEGEPSTAPSLTLTGRKKEPDQLQTADGWAKFTGGFFFGGISGVIWAYF 206
Query: 160 LLYVLNLPYYVK 125
LLYVLNLPY+VK
Sbjct: 207 LLYVLNLPYFVK 218
>ref|XP_002303024.1| predicted protein [Populus trichocarpa] gi|222844750|gb|EEE82297.1|
predicted protein [Populus trichocarpa]
Length = 216
Score = 177 bits (450), Expect(2) = 1e-71
Identities = 89/110 (80%), Positives = 99/110 (90%)
Frame = -1
Query: 791 AASPIASQLKSNFASSITRGLVSPKGISGAPFKVLPSRRRSCFIVKAIQADKPTYQVVQP 612
AASP+ASQLKS+FASS+ R LV P ISGAPF+V PS+R F VKAIQ++KPTYQVVQP
Sbjct: 4 AASPMASQLKSSFASSLARRLVIPTAISGAPFRVSPSKRS--FTVKAIQSEKPTYQVVQP 61
Query: 611 INGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFL 462
INGDPFIGSLETP+TSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGFL
Sbjct: 62 INGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFL 111
Score = 119 bits (298), Expect(2) = 1e-71
Identities = 56/72 (77%), Positives = 61/72 (84%)
Frame = -2
Query: 340 ICLTIYGIASFNEGEPSTAPALTLTGRKKEPDQLQTADGWAKXXXXXXXXGISGVTWAFF 161
ICLT+YG+ASF EGEPSTAP LTLTGRKKEPDQLQT+DGWAK GISGV WA+F
Sbjct: 145 ICLTMYGVASFTEGEPSTAPGLTLTGRKKEPDQLQTSDGWAKFSGGFFFGGISGVIWAYF 204
Query: 160 LLYVLNLPYYVK 125
LLYV+NLPYYVK
Sbjct: 205 LLYVINLPYYVK 216
>ref|XP_002320562.1| hypothetical protein POPTRDRAFT_732598 [Populus trichocarpa]
gi|118487151|gb|ABK95404.1| unknown [Populus
trichocarpa] gi|118488447|gb|ABK96038.1| unknown
[Populus trichocarpa] gi|222861335|gb|EEE98877.1|
hypothetical protein POPTRDRAFT_732598 [Populus
trichocarpa]
Length = 216
Score = 178 bits (451), Expect(2) = 3e-71
Identities = 89/109 (81%), Positives = 99/109 (90%)
Frame = -1
Query: 788 ASPIASQLKSNFASSITRGLVSPKGISGAPFKVLPSRRRSCFIVKAIQADKPTYQVVQPI 609
ASP+ASQLKS+ ASS+ R LV P+GISGAPF+V P++R F VKA+QADKPTYQVVQPI
Sbjct: 5 ASPMASQLKSSLASSLGRRLVIPRGISGAPFRVSPNKRS--FTVKAVQADKPTYQVVQPI 62
Query: 608 NGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFL 462
NGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGFL
Sbjct: 63 NGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFL 111
Score = 117 bits (294), Expect(2) = 3e-71
Identities = 57/72 (79%), Positives = 60/72 (83%)
Frame = -2
Query: 340 ICLTIYGIASFNEGEPSTAPALTLTGRKKEPDQLQTADGWAKXXXXXXXXGISGVTWAFF 161
ICLT+YG ASF EGEPS AP+LTLTGRKK PDQLQTADGWAK GISGVTWAFF
Sbjct: 145 ICLTMYGAASFTEGEPSIAPSLTLTGRKKVPDQLQTADGWAKFTGGFFFGGISGVTWAFF 204
Query: 160 LLYVLNLPYYVK 125
LLYV+NLPYYVK
Sbjct: 205 LLYVINLPYYVK 216
>ref|NP_001236868.1| uncharacterized protein LOC100527240 [Glycine max]
gi|255631856|gb|ACU16295.1| unknown [Glycine max]
Length = 214
Score = 169 bits (429), Expect(2) = 5e-69
Identities = 86/113 (76%), Positives = 99/113 (87%), Gaps = 1/113 (0%)
Frame = -1
Query: 797 MAAASPIASQLKSNFASSITRGLVSPKGISGA-PFKVLPSRRRSCFIVKAIQADKPTYQV 621
MAAASP+ASQLKS F TR LV+PKG+S + P ++PSRR+ F VKAIQ++KPTYQV
Sbjct: 1 MAAASPMASQLKSTF----TRTLVAPKGLSASSPLHLVPSRRQFSFTVKAIQSEKPTYQV 56
Query: 620 VQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFL 462
+QPINGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHG+L
Sbjct: 57 IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGYL 109
Score = 119 bits (297), Expect(2) = 5e-69
Identities = 56/72 (77%), Positives = 62/72 (86%)
Frame = -2
Query: 340 ICLTIYGIASFNEGEPSTAPALTLTGRKKEPDQLQTADGWAKXXXXXXXXGISGVTWAFF 161
+CLTIYGI+SFNEG PSTAP+LTLTGRKKEPDQLQTADGWAK GISGV WA+F
Sbjct: 143 LCLTIYGISSFNEGAPSTAPSLTLTGRKKEPDQLQTADGWAKFTGGFFFGGISGVIWAYF 202
Query: 160 LLYVLNLPYYVK 125
LLYVL+LPYY+K
Sbjct: 203 LLYVLDLPYYIK 214