BLASTX nr result

ID: Coptis25_contig00005620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005620
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269044.2| PREDICTED: putative disease resistance prote...   132   2e-29
ref|XP_002332101.1| cc-nbs-lrr resistance protein [Populus trich...   132   3e-29
ref|XP_002267795.1| PREDICTED: putative disease resistance prote...   130   1e-28
ref|XP_002268671.2| PREDICTED: putative disease resistance prote...   129   2e-28
gb|AAK61317.1|AF306501_1 NBS-LRR resistance-like protein J71 [Ph...   129   3e-28

>ref|XP_002269044.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 919

 Score =  132 bits (333), Expect = 2e-29
 Identities = 66/155 (42%), Positives = 101/155 (65%), Gaps = 1/155 (0%)
 Frame = -2

Query: 464 IITTRDENIAEKMTSTYIHRLGQLSDEECWSFFKHIALR-EIEDDREKFEEIGKKIAWKC 288
           ++TTR E++ E M +TY+H LG+LS+++  + F  IA   +  +  E F+EIG+KIA KC
Sbjct: 309 LVTTRKESVVEMMRTTYMHSLGKLSEDKSRALFYQIAFYGKNREKMEDFQEIGEKIADKC 368

Query: 287 KGVPLAVKIIASLMRRKRSVVEWEDVLASNIWEEMSKDEHEFXXXXXXXXXXXXXXLKRC 108
           KG+PLA+K + +LMR K +  EWE+VL S +W ++     +               +KRC
Sbjct: 369 KGLPLAIKTLGNLMRSKHNREEWENVLCSEVW-KLDVFGRDISPALLLSYYDLPPTIKRC 427

Query: 107 FSYCAIFREDAEIDKDELVKLWMAQGFLGYDSSKD 3
           FS+CA+F +D+ I++DEL+KLWMAQ +L  D SK+
Sbjct: 428 FSFCAVFPKDSVIERDELIKLWMAQSYLKSDGSKE 462


>ref|XP_002332101.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222874921|gb|EEF12052.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 963

 Score =  132 bits (332), Expect = 3e-29
 Identities = 69/157 (43%), Positives = 95/157 (60%), Gaps = 3/157 (1%)
 Frame = -2

Query: 464 IITTRDENIAEKMTS--TYIHRLGQLSDEECWSFFKHIALREIED-DREKFEEIGKKIAW 294
           ++TTR  N+A +M S  T I  LG LS +ECWS F  +A  E    +R   E+IG++IA 
Sbjct: 309 LVTTRKRNVASRMGSSPTDILELGLLSTDECWSLFSRLAFFEKNSRERGDLEDIGRQIAA 368

Query: 293 KCKGVPLAVKIIASLMRRKRSVVEWEDVLASNIWEEMSKDEHEFXXXXXXXXXXXXXXLK 114
           KCKG+PLA K + SL+R K  + EWE VL S++WE   + E +               ++
Sbjct: 369 KCKGLPLAAKSLGSLLRFKSRIEEWESVLNSHVWESAEEAESKILAPLWLSYYDLPSDMR 428

Query: 113 RCFSYCAIFREDAEIDKDELVKLWMAQGFLGYDSSKD 3
           RCFSYCA+F +D   ++D LVKLWMAQGFL    +K+
Sbjct: 429 RCFSYCAVFPKDFTFERDTLVKLWMAQGFLRETHNKE 465


>ref|XP_002267795.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 928

 Score =  130 bits (327), Expect = 1e-28
 Identities = 65/148 (43%), Positives = 93/148 (62%), Gaps = 1/148 (0%)
 Frame = -2

Query: 464 IITTRDENIAEKMTSTYIHRLGQLSDEECWSFFKHIALREIEDDR-EKFEEIGKKIAWKC 288
           ++TTR+EN++  M +TY H LG+LS E+CWS F +IA      ++ E+ E IG+KIA KC
Sbjct: 308 LVTTRNENVSTMMGTTYKHPLGELSKEQCWSLFSNIAFYGRSREKVEELENIGRKIADKC 367

Query: 287 KGVPLAVKIIASLMRRKRSVVEWEDVLASNIWEEMSKDEHEFXXXXXXXXXXXXXXLKRC 108
           +G+PLA K++ SLMR K +  +WE +L + IW ++   E                 +KRC
Sbjct: 368 RGLPLAAKVLGSLMRLKDNKEDWESILNNEIW-QLDVIEKHLSTPLLLSYYDLSPAVKRC 426

Query: 107 FSYCAIFREDAEIDKDELVKLWMAQGFL 24
           FSYCA+F +D  I KD L+KLWMA  +L
Sbjct: 427 FSYCAVFPKDQIIRKDRLIKLWMANSYL 454


>ref|XP_002268671.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 923

 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/156 (41%), Positives = 100/156 (64%), Gaps = 2/156 (1%)
 Frame = -2

Query: 464 IITTRDENIAEKMTSTYIHRLGQLSDEECWSFFKHIAL--REIEDDREKFEEIGKKIAWK 291
           + TTR E++ + M +TY H LG+LS E+  + F  IA   R   +  E+ +EIG+KIA K
Sbjct: 309 LATTRKESVVKMMRATYKHPLGELSSEQSRALFHQIAFYERSTWEKEEELKEIGEKIADK 368

Query: 290 CKGVPLAVKIIASLMRRKRSVVEWEDVLASNIWEEMSKDEHEFXXXXXXXXXXXXXXLKR 111
           CKG+PLA+K + +L+R K S  EW++VL S +W ++ + E +               ++R
Sbjct: 369 CKGLPLAIKTLGNLLRIKNSEEEWKNVLNSEVW-QLDEFERDISPALLLSYYDLPPAIQR 427

Query: 110 CFSYCAIFREDAEIDKDELVKLWMAQGFLGYDSSKD 3
           CFS+CA+F +D+ I++DEL+KLWMAQ +L  D SK+
Sbjct: 428 CFSFCAVFPKDSVIERDELIKLWMAQSYLKSDGSKE 463


>gb|AAK61317.1|AF306501_1 NBS-LRR resistance-like protein J71 [Phaseolus vulgaris]
           gi|14348631|gb|AAK61321.1|AF306505_1 NBS-LRR
           resistance-like protein J71 [Phaseolus vulgaris]
          Length = 1066

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/148 (41%), Positives = 100/148 (67%), Gaps = 1/148 (0%)
 Frame = -2

Query: 464 IITTRDENIAEKMTSTYIHRLGQLSDEECWSFFKHIALREIEDD-REKFEEIGKKIAWKC 288
           ++TTR+E +A  M+S  +HRL QL +EECW+ F++ AL++ + +  ++ +EIG++I  +C
Sbjct: 316 LVTTREEKVASNMSSK-VHRLKQLREEECWNVFENHALKDGDYELNDELKEIGRRIVDRC 374

Query: 287 KGVPLAVKIIASLMRRKRSVVEWEDVLASNIWEEMSKDEHEFXXXXXXXXXXXXXXLKRC 108
           KG+PLA+K I  L+R K S+ +W+++L S IW E+ K+ +E               LK+C
Sbjct: 375 KGLPLALKTIGCLLRTKSSISDWKNILESEIW-ELPKENNEIIPALFMSYRYLPSHLKKC 433

Query: 107 FSYCAIFREDAEIDKDELVKLWMAQGFL 24
           F+YCA+F +D E +K EL+ +WMAQ FL
Sbjct: 434 FAYCALFPKDYEFEKKELILMWMAQNFL 461


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