BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005606
         (1306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863281.1| oxidoreductase [Arabidopsis lyrata subsp. ly...   231   3e-58
ref|XP_002300061.1| predicted protein [Populus trichocarpa] gi|2...   230   7e-58
gb|ABK96194.1| unknown [Populus trichocarpa]                          228   3e-57
ref|NP_193037.1| putative quinone-oxidoreductase-like protein [A...   228   3e-57
ref|XP_003634840.1| PREDICTED: putative quinone-oxidoreductase h...   227   4e-57

>ref|XP_002863281.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
            gi|297309115|gb|EFH39540.1| oxidoreductase [Arabidopsis
            lyrata subsp. lyrata]
          Length = 329

 Score =  231 bits (589), Expect = 3e-58
 Identities = 115/149 (77%), Positives = 125/149 (83%)
 Frame = -2

Query: 1305 YGAAAAALKHAEVPVPSPKKNEVLLKVEATSLNPVDWKIQKGLLRPLFPRKFPHIPATDL 1126
            YG  AAALKH +VPVP+PK NEV LK+EATSLNPVDWKIQKG++RP  PRKFP IPATD+
Sbjct: 14   YGGGAAALKHVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPFLPRKFPCIPATDV 73

Query: 1125 AGEVVEVGPGVKNFSIGDKVVALLSHFSGGGLAEFAVAQGSLAVKRPPEVSAAEGAGLPV 946
            AGEVVEVG GVKNF  GDKVVA+LSH  GGGLAEFAVA   L VKRP EV AAE A LPV
Sbjct: 74   AGEVVEVGSGVKNFKAGDKVVAVLSHLGGGGLAEFAVASEKLTVKRPQEVGAAEAAALPV 133

Query: 945  AGLTALQALTKSAGIKLDGSGKTANILIT 859
            AGLTALQALT  AG+KLDG+GK ANIL+T
Sbjct: 134  AGLTALQALTNPAGLKLDGTGKKANILVT 162



 Score =  192 bits (489), Expect = 1e-46
 Identities = 100/165 (60%), Positives = 112/165 (67%)
 Frame = -2

Query: 678 RNIDLVKSLGADEILDYKTPDGVALKSPSGRKYDAVIHCATGIPWSTFEPNLSERGKVID 499
           RNID VKSLGADE+LDYKTP+G  LKSPSG+KYDAV+HCA GIP+STFEPNLSE GKVID
Sbjct: 190 RNIDFVKSLGADEVLDYKTPEGATLKSPSGKKYDAVVHCANGIPFSTFEPNLSENGKVID 249

Query: 498 ITPGPSSIMTCALKKLTFSKKQIVPLLLIPKGXXXXXXXXXXXXXXXXXXXXXXXXXXXX 319
           ITPGPS++ T A+KK+T SKKQ+VPLLLIPK                             
Sbjct: 250 ITPGPSAMWTYAVKKVTMSKKQLVPLLLIPKA-------------------------ENL 284

Query: 318 XXXXXXXXXXXXXXXVDSKHPLDKAEDAWSKSIDGHATGKIIVEP 184
                          +DSKHPL KAEDAW+KSIDGHATGKIIVEP
Sbjct: 285 EFMVNLLKEGKVKTVIDSKHPLSKAEDAWAKSIDGHATGKIIVEP 329


>ref|XP_002300061.1| predicted protein [Populus trichocarpa] gi|222847319|gb|EEE84866.1|
            predicted protein [Populus trichocarpa]
          Length = 335

 Score =  230 bits (586), Expect = 7e-58
 Identities = 118/155 (76%), Positives = 130/155 (83%), Gaps = 6/155 (3%)
 Frame = -2

Query: 1305 YGAAAAALKHAEVPVPSPKKNEVLLKVEATSLNPVDWKIQKGLLRPLFPRKFPHIPAT-- 1132
            YG  AA LKH EVPVPS K++EVLLK+EATSLNPVDWK+QKGLLRPL PR+FP+IP T  
Sbjct: 14   YGGGAAGLKHVEVPVPSAKRDEVLLKLEATSLNPVDWKMQKGLLRPLLPRRFPYIPETFV 73

Query: 1131 ----DLAGEVVEVGPGVKNFSIGDKVVALLSHFSGGGLAEFAVAQGSLAVKRPPEVSAAE 964
                D+AGEVVEVGPGV NF  GDKVVA+LSH SGGGLAEF VA+ SL V RPPEVSAAE
Sbjct: 74   ATGADVAGEVVEVGPGVTNFKTGDKVVAILSHISGGGLAEFVVAKKSLPVARPPEVSAAE 133

Query: 963  GAGLPVAGLTALQALTKSAGIKLDGSGKTANILIT 859
            GAGLPVAGLTA QA+T+SAG+KLDGSG   NILIT
Sbjct: 134  GAGLPVAGLTAHQAVTQSAGVKLDGSGNQKNILIT 168



 Score =  195 bits (495), Expect = 2e-47
 Identities = 101/165 (61%), Positives = 110/165 (66%)
 Frame = -2

Query: 678 RNIDLVKSLGADEILDYKTPDGVALKSPSGRKYDAVIHCATGIPWSTFEPNLSERGKVID 499
           RNI+ VKSLGADE+LDYKTP+G ALKSPSG+KYDAVIHCA GIPWSTFEPNLS  GKVID
Sbjct: 196 RNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVIHCAAGIPWSTFEPNLSANGKVID 255

Query: 498 ITPGPSSIMTCALKKLTFSKKQIVPLLLIPKGXXXXXXXXXXXXXXXXXXXXXXXXXXXX 319
           ITPGPS+ M  A KKLTFSKKQ+VPLLLIP G                            
Sbjct: 256 ITPGPSAFMASAFKKLTFSKKQLVPLLLIPNG-------------------------ENL 290

Query: 318 XXXXXXXXXXXXXXXVDSKHPLDKAEDAWSKSIDGHATGKIIVEP 184
                          +DSKHPL +AEDAW+K IDGHATGKIIVEP
Sbjct: 291 NYLVNLVKEGKLKTVIDSKHPLSRAEDAWAKIIDGHATGKIIVEP 335


>gb|ABK96194.1| unknown [Populus trichocarpa]
          Length = 329

 Score =  228 bits (581), Expect = 3e-57
 Identities = 113/149 (75%), Positives = 126/149 (84%)
 Frame = -2

Query: 1305 YGAAAAALKHAEVPVPSPKKNEVLLKVEATSLNPVDWKIQKGLLRPLFPRKFPHIPATDL 1126
            YG  AA LKH EVPVPS K++EVLLK+EATSLNPVDWK+Q GLLRPL P +FP++P  D+
Sbjct: 14   YGGGAAGLKHVEVPVPSAKRDEVLLKLEATSLNPVDWKMQNGLLRPLLPWRFPYVPGADV 73

Query: 1125 AGEVVEVGPGVKNFSIGDKVVALLSHFSGGGLAEFAVAQGSLAVKRPPEVSAAEGAGLPV 946
            AGEVVEVGPGV NF  GDKVVA+LSH SGGGLAEF VA+  L V RPPEVSAAEGAGLPV
Sbjct: 74   AGEVVEVGPGVTNFKTGDKVVAILSHISGGGLAEFVVAKKGLPVARPPEVSAAEGAGLPV 133

Query: 945  AGLTALQALTKSAGIKLDGSGKTANILIT 859
            AGLTA QA+T+SAG+KLDGSG   NILIT
Sbjct: 134  AGLTAHQAVTQSAGVKLDGSGNQKNILIT 162



 Score =  191 bits (484), Expect = 5e-46
 Identities = 100/165 (60%), Positives = 109/165 (66%)
 Frame = -2

Query: 678 RNIDLVKSLGADEILDYKTPDGVALKSPSGRKYDAVIHCATGIPWSTFEPNLSERGKVID 499
           RNI+ VKSLGADE+LDYKTP+G ALKSPSG+KYDAVIHCA GIPWSTFEPNLS  GKVID
Sbjct: 190 RNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVIHCAAGIPWSTFEPNLSANGKVID 249

Query: 498 ITPGPSSIMTCALKKLTFSKKQIVPLLLIPKGXXXXXXXXXXXXXXXXXXXXXXXXXXXX 319
           ITPG S+ M  A KKLTFSKKQ+VPLLLIP G                            
Sbjct: 250 ITPGLSAYMASAFKKLTFSKKQLVPLLLIPNG-------------------------ENL 284

Query: 318 XXXXXXXXXXXXXXXVDSKHPLDKAEDAWSKSIDGHATGKIIVEP 184
                          +DSKHPL +AEDAW+K IDGHATGKIIVEP
Sbjct: 285 NYLVNLVKEGKLKTVIDSKHPLSRAEDAWAKIIDGHATGKIIVEP 329


>ref|NP_193037.1| putative quinone-oxidoreductase-like protein [Arabidopsis thaliana]
            gi|67460977|sp|Q9SV68.1|QORH_ARATH RecName: Full=Putative
            quinone-oxidoreductase homolog, chloroplastic
            gi|15724256|gb|AAL06521.1|AF412068_1 AT4g13010/F25G13_100
            [Arabidopsis thaliana] gi|5123942|emb|CAB45500.1|
            putative protein [Arabidopsis thaliana]
            gi|7268003|emb|CAB78343.1| putative protein [Arabidopsis
            thaliana] gi|15028001|gb|AAK76531.1| unknown protein
            [Arabidopsis thaliana] gi|15912237|gb|AAL08252.1|
            AT4g13010/F25G13_100 [Arabidopsis thaliana]
            gi|21436057|gb|AAM51229.1| unknown protein [Arabidopsis
            thaliana] gi|332657813|gb|AEE83213.1| putative
            quinone-oxidoreductase-like protein [Arabidopsis
            thaliana]
          Length = 329

 Score =  228 bits (580), Expect = 3e-57
 Identities = 113/149 (75%), Positives = 124/149 (83%)
 Frame = -2

Query: 1305 YGAAAAALKHAEVPVPSPKKNEVLLKVEATSLNPVDWKIQKGLLRPLFPRKFPHIPATDL 1126
            YG  AA L+H +VPVP+PK NEV LK+EATSLNPVDWKIQKG++RP  PRKFP IPATD+
Sbjct: 14   YGGGAAGLEHVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPFLPRKFPCIPATDV 73

Query: 1125 AGEVVEVGPGVKNFSIGDKVVALLSHFSGGGLAEFAVAQGSLAVKRPPEVSAAEGAGLPV 946
            AGEVVEVG GVKNF  GDKVVA+LSH  GGGLAEFAVA   L VKRP EV AAE A LPV
Sbjct: 74   AGEVVEVGSGVKNFKAGDKVVAVLSHLGGGGLAEFAVATEKLTVKRPQEVGAAEAAALPV 133

Query: 945  AGLTALQALTKSAGIKLDGSGKTANILIT 859
            AGLTALQALT  AG+KLDG+GK ANIL+T
Sbjct: 134  AGLTALQALTNPAGLKLDGTGKKANILVT 162



 Score =  190 bits (482), Expect = 8e-46
 Identities = 98/165 (59%), Positives = 112/165 (67%)
 Frame = -2

Query: 678 RNIDLVKSLGADEILDYKTPDGVALKSPSGRKYDAVIHCATGIPWSTFEPNLSERGKVID 499
           RNI+ VKSLGADE+LDYKTP+G ALKSPSG+KYDAV+HCA GIP+S FEPNLSE GKVID
Sbjct: 190 RNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVVHCANGIPFSVFEPNLSENGKVID 249

Query: 498 ITPGPSSIMTCALKKLTFSKKQIVPLLLIPKGXXXXXXXXXXXXXXXXXXXXXXXXXXXX 319
           ITPGP+++ T A+KK+T SKKQ+VPLLLIPK                             
Sbjct: 250 ITPGPNAMWTYAVKKITMSKKQLVPLLLIPKA-------------------------ENL 284

Query: 318 XXXXXXXXXXXXXXXVDSKHPLDKAEDAWSKSIDGHATGKIIVEP 184
                          +DSKHPL KAEDAW+KSIDGHATGKIIVEP
Sbjct: 285 EFMVNLVKEGKVKTVIDSKHPLSKAEDAWAKSIDGHATGKIIVEP 329


>ref|XP_003634840.1| PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic
            [Vitis vinifera]
          Length = 329

 Score =  227 bits (579), Expect = 4e-57
 Identities = 113/149 (75%), Positives = 128/149 (85%)
 Frame = -2

Query: 1305 YGAAAAALKHAEVPVPSPKKNEVLLKVEATSLNPVDWKIQKGLLRPLFPRKFPHIPATDL 1126
            YG  AA L+HAEVPVP+P K+EVLLK+EA SLNPVDWKIQKG+LRPLFP KFPHIP TD+
Sbjct: 14   YGGGAAGLEHAEVPVPAPAKDEVLLKLEAASLNPVDWKIQKGMLRPLFPCKFPHIPVTDV 73

Query: 1125 AGEVVEVGPGVKNFSIGDKVVALLSHFSGGGLAEFAVAQGSLAVKRPPEVSAAEGAGLPV 946
            AGEVVEVG GVK+F  GDKVV++LSHFSGGGLAEFAVA+ ++ V RP EVSAAEGAGLP+
Sbjct: 74   AGEVVEVGSGVKDFKAGDKVVSVLSHFSGGGLAEFAVAKKNITVSRPAEVSAAEGAGLPI 133

Query: 945  AGLTALQALTKSAGIKLDGSGKTANILIT 859
            AGLTA QALT+  GI LDGSG   +ILIT
Sbjct: 134  AGLTAHQALTQVVGINLDGSGPQKSILIT 162



 Score =  196 bits (497), Expect = 1e-47
 Identities = 104/165 (63%), Positives = 112/165 (67%)
 Frame = -2

Query: 678 RNIDLVKSLGADEILDYKTPDGVALKSPSGRKYDAVIHCATGIPWSTFEPNLSERGKVID 499
           RNIDLVKSLGADE+LDYKTPDG ALKSPSGR +DAVIHCATGIPWSTFEPNLS  GKVID
Sbjct: 190 RNIDLVKSLGADEVLDYKTPDGAALKSPSGRTFDAVIHCATGIPWSTFEPNLSTNGKVID 249

Query: 498 ITPGPSSIMTCALKKLTFSKKQIVPLLLIPKGXXXXXXXXXXXXXXXXXXXXXXXXXXXX 319
           ITP  S+++T ALKKLTFSKKQ+VPLLL PK                             
Sbjct: 250 ITPNASAMVTFALKKLTFSKKQLVPLLLSPK-------------------------KENL 284

Query: 318 XXXXXXXXXXXXXXXVDSKHPLDKAEDAWSKSIDGHATGKIIVEP 184
                          +DSKHPL KAEDAW+KSIDGHATGKIIVEP
Sbjct: 285 ECLVGLVKEGKLKTVIDSKHPLSKAEDAWAKSIDGHATGKIIVEP 329