BLASTX nr result

ID: Coptis25_contig00005596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005596
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592703.1| Lysine-specific demethylase 3B [Medicago tru...    90   2e-16
ref|XP_003592704.1| Lysine-specific demethylase 3B [Medicago tru...    89   5e-16
ref|XP_003535763.1| PREDICTED: uncharacterized protein LOC100805...    87   1e-15
ref|XP_003555059.1| PREDICTED: uncharacterized protein LOC100780...    87   1e-15
emb|CBI29042.3| unnamed protein product [Vitis vinifera]               84   2e-14

>ref|XP_003592703.1| Lysine-specific demethylase 3B [Medicago truncatula]
           gi|358345316|ref|XP_003636727.1| Lysine-specific
           demethylase 3B [Medicago truncatula]
           gi|355481751|gb|AES62954.1| Lysine-specific demethylase
           3B [Medicago truncatula] gi|355502662|gb|AES83865.1|
           Lysine-specific demethylase 3B [Medicago truncatula]
          Length = 1158

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/75 (57%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
 Frame = -1

Query: 222 AKRVTQNLNEPMAPLSKKTQLEESTMCHQCQRNDRGPVVRCMKCKTERYCHECL-NWYPH 46
           AK + Q L + +   + K   EES MCHQCQRND+G VVRC KCK +R+C  CL NWYPH
Sbjct: 302 AKSIEQ-LKQKINKRNPKWIAEESLMCHQCQRNDKGRVVRCTKCKRKRFCIPCLNNWYPH 360

Query: 45  LSHTEVARSCPVCRG 1
           L   EVA +CPVC G
Sbjct: 361 LKEEEVAEACPVCCG 375


>ref|XP_003592704.1| Lysine-specific demethylase 3B [Medicago truncatula]
           gi|358345318|ref|XP_003636728.1| Lysine-specific
           demethylase 3B [Medicago truncatula]
           gi|355481752|gb|AES62955.1| Lysine-specific demethylase
           3B [Medicago truncatula] gi|355502663|gb|AES83866.1|
           Lysine-specific demethylase 3B [Medicago truncatula]
          Length = 1153

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 37/54 (68%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
 Frame = -1

Query: 159 EESTMCHQCQRNDRGPVVRCMKCKTERYCHECL-NWYPHLSHTEVARSCPVCRG 1
           EES MCHQCQRND+G VVRC KCK +RYC  CL NWYPHL   ++A +CPVC G
Sbjct: 338 EESLMCHQCQRNDKGRVVRCTKCKRKRYCIPCLNNWYPHLKEEKIAEACPVCCG 391


>ref|XP_003535763.1| PREDICTED: uncharacterized protein LOC100805723 [Glycine max]
          Length = 1222

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/72 (55%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
 Frame = -1

Query: 204 NLNEPMAPLSKKTQL---EESTMCHQCQRNDRGPVVRCMKCKTERYCHECL-NWYPHLSH 37
           N    M  +SKK      EES MCHQCQRND+G VVRC  CK +R+C  C+ NWYPHL  
Sbjct: 429 NTEAVMPNISKKDPKCIKEESLMCHQCQRNDKGRVVRCTSCKRKRFCVHCIENWYPHLKE 488

Query: 36  TEVARSCPVCRG 1
             +A +CPVCRG
Sbjct: 489 DYIAEACPVCRG 500


>ref|XP_003555059.1| PREDICTED: uncharacterized protein LOC100780803 [Glycine max]
          Length = 947

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 35/54 (64%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
 Frame = -1

Query: 159 EESTMCHQCQRNDRGPVVRCMKCKTERYCHECL-NWYPHLSHTEVARSCPVCRG 1
           EES MCHQCQRND+G +VRC KCK +R+C  CL NWYPHL   ++A+ CPVC G
Sbjct: 234 EESLMCHQCQRNDKGRIVRCTKCKRKRFCLPCLRNWYPHLKEEDIAQECPVCCG 287


>emb|CBI29042.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 37/60 (61%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
 Frame = -1

Query: 174 KKTQLEE-STMCHQCQRNDRGPVVRCMKCKTERYCHECL-NWYPHLSHTEVARSCPVCRG 1
           KK  +EE S MCHQCQRND+G VVRC KCK +R+C  CL  WYPH+S   +A SCP C G
Sbjct: 315 KKKWIEEVSLMCHQCQRNDKGRVVRCRKCKRKRFCIPCLETWYPHMSEEAIAESCPFCSG 374


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