BLASTX nr result

ID: Coptis25_contig00005594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005594
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22290.1| unknown [Picea sitchensis] gi|148908521|gb|ABR173...    86   3e-15
gb|ABK22320.1| unknown [Picea sitchensis]                              86   4e-15
gb|AEL99052.1| 60S ribosomal protein L10a-3, partial [Silene lat...    85   7e-15
gb|AEL99051.1| 60S ribosomal protein L10a-3, partial [Silene lat...    85   7e-15
gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis]              85   7e-15

>gb|ABK22290.1| unknown [Picea sitchensis] gi|148908521|gb|ABR17372.1| unknown
           [Picea sitchensis]
          Length = 216

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/43 (93%), Positives = 42/43 (97%)
 Frame = +3

Query: 3   DEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 131
           +EKQ+FQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKP RIF
Sbjct: 174 EEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPNRIF 216


>gb|ABK22320.1| unknown [Picea sitchensis]
          Length = 216

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 39/43 (90%), Positives = 42/43 (97%)
 Frame = +3

Query: 3   DEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 131
           +EKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLK+TMGKP R+F
Sbjct: 174 EEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKPARVF 216


>gb|AEL99052.1| 60S ribosomal protein L10a-3, partial [Silene latifolia]
          Length = 216

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/43 (88%), Positives = 42/43 (97%)
 Frame = +3

Query: 3   DEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 131
           DEKQ+FQNVQ+SVNFLVSLLKKNWQNVRCLYLK+TMG+P RIF
Sbjct: 174 DEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGRPYRIF 216


>gb|AEL99051.1| 60S ribosomal protein L10a-3, partial [Silene latifolia]
          Length = 216

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/43 (88%), Positives = 42/43 (97%)
 Frame = +3

Query: 3   DEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 131
           DEKQ+FQNVQ+SVNFLVSLLKKNWQNVRCLYLK+TMG+P RIF
Sbjct: 174 DEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGRPYRIF 216


>gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis]
          Length = 216

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/43 (88%), Positives = 42/43 (97%)
 Frame = +3

Query: 3   DEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 131
           +EKQ+FQNVQLSVNFLVSLLKKNWQNVRCLYLK+TMGKP R+F
Sbjct: 174 EEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKPYRVF 216


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