BLASTX nr result
ID: Coptis25_contig00005594
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00005594 (354 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK22290.1| unknown [Picea sitchensis] gi|148908521|gb|ABR173... 86 3e-15 gb|ABK22320.1| unknown [Picea sitchensis] 86 4e-15 gb|AEL99052.1| 60S ribosomal protein L10a-3, partial [Silene lat... 85 7e-15 gb|AEL99051.1| 60S ribosomal protein L10a-3, partial [Silene lat... 85 7e-15 gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis] 85 7e-15 >gb|ABK22290.1| unknown [Picea sitchensis] gi|148908521|gb|ABR17372.1| unknown [Picea sitchensis] Length = 216 Score = 85.9 bits (211), Expect = 3e-15 Identities = 40/43 (93%), Positives = 42/43 (97%) Frame = +3 Query: 3 DEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 131 +EKQ+FQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKP RIF Sbjct: 174 EEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPNRIF 216 >gb|ABK22320.1| unknown [Picea sitchensis] Length = 216 Score = 85.5 bits (210), Expect = 4e-15 Identities = 39/43 (90%), Positives = 42/43 (97%) Frame = +3 Query: 3 DEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 131 +EKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLK+TMGKP R+F Sbjct: 174 EEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKPARVF 216 >gb|AEL99052.1| 60S ribosomal protein L10a-3, partial [Silene latifolia] Length = 216 Score = 84.7 bits (208), Expect = 7e-15 Identities = 38/43 (88%), Positives = 42/43 (97%) Frame = +3 Query: 3 DEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 131 DEKQ+FQNVQ+SVNFLVSLLKKNWQNVRCLYLK+TMG+P RIF Sbjct: 174 DEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGRPYRIF 216 >gb|AEL99051.1| 60S ribosomal protein L10a-3, partial [Silene latifolia] Length = 216 Score = 84.7 bits (208), Expect = 7e-15 Identities = 38/43 (88%), Positives = 42/43 (97%) Frame = +3 Query: 3 DEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 131 DEKQ+FQNVQ+SVNFLVSLLKKNWQNVRCLYLK+TMG+P RIF Sbjct: 174 DEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGRPYRIF 216 >gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis] Length = 216 Score = 84.7 bits (208), Expect = 7e-15 Identities = 38/43 (88%), Positives = 42/43 (97%) Frame = +3 Query: 3 DEKQVFQNVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPVRIF 131 +EKQ+FQNVQLSVNFLVSLLKKNWQNVRCLYLK+TMGKP R+F Sbjct: 174 EEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKPYRVF 216