BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005574
         (1271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pen...   353   7e-95
emb|CBI17645.3| unnamed protein product [Vitis vinifera]              353   7e-95
emb|CAN82640.1| hypothetical protein VITISV_028821 [Vitis vinifera]   353   7e-95
ref|XP_002514857.1| pentatricopeptide repeat-containing protein,...   338   1e-90
ref|XP_002325903.1| predicted membrane protein [Populus trichoca...   332   2e-88

>ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  353 bits (905), Expect = 7e-95
 Identities = 193/254 (75%), Positives = 203/254 (79%)
 Frame = +1

Query: 250  DLGRRSKIVLEXXXXXXXXXXPELAVLKDTRHLDLSDTVGLGILDAFFASLSMILVSEIG 429
            DLGRRSKIVLE           +     D+  LDLS   GLG+ DAFFASLSMI+VSEIG
Sbjct: 42   DLGRRSKIVLEDLEVETTGDKKD----PDSISLDLSLDSGLGVFDAFFASLSMIIVSEIG 97

Query: 430  DETFIIAALMAMRHPKSIVLSGALSALVVMTVLSTGLGRIVPNLISRKHTNSAATVLYAF 609
            DETFIIAALMAMRHPKSIVLSGALSAL+VMTVLSTGLGRIVPNLISRKHTNSAATVLYAF
Sbjct: 98   DETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVLYAF 157

Query: 610  FGLRLLYIAWRSDSKASQXXXXXXXXXXXXTQQGKTASRRFFSRFCTPIFLESFVLTFLA 789
            FGLRLLYIAWRSDSKASQ            + QGKT+ RRFFSRFCTPIFLESF+LTFLA
Sbjct: 158  FGLRLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILTFLA 217

Query: 790  EWGDRSQIATIALATHKNAIGVAVGATLGHTICTSIAVVGGSMLASKISQGTVATVXXXX 969
            EWGDRSQIATIALATHKNAIGVAVGAT+GHTICTS+AVVGGSMLASKISQGTVATV    
Sbjct: 218  EWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVGGLL 277

Query: 970  XXXXXXXXXXXPPL 1011
                       PPL
Sbjct: 278  FLGFSLSSYFYPPL 291


>emb|CBI17645.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  353 bits (905), Expect = 7e-95
 Identities = 193/254 (75%), Positives = 203/254 (79%)
 Frame = +1

Query: 250  DLGRRSKIVLEXXXXXXXXXXPELAVLKDTRHLDLSDTVGLGILDAFFASLSMILVSEIG 429
            DLGRRSKIVLE           +     D+  LDLS   GLG+ DAFFASLSMI+VSEIG
Sbjct: 42   DLGRRSKIVLEDLEVETTGDKKD----PDSISLDLSLDSGLGVFDAFFASLSMIIVSEIG 97

Query: 430  DETFIIAALMAMRHPKSIVLSGALSALVVMTVLSTGLGRIVPNLISRKHTNSAATVLYAF 609
            DETFIIAALMAMRHPKSIVLSGALSAL+VMTVLSTGLGRIVPNLISRKHTNSAATVLYAF
Sbjct: 98   DETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVLYAF 157

Query: 610  FGLRLLYIAWRSDSKASQXXXXXXXXXXXXTQQGKTASRRFFSRFCTPIFLESFVLTFLA 789
            FGLRLLYIAWRSDSKASQ            + QGKT+ RRFFSRFCTPIFLESF+LTFLA
Sbjct: 158  FGLRLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILTFLA 217

Query: 790  EWGDRSQIATIALATHKNAIGVAVGATLGHTICTSIAVVGGSMLASKISQGTVATVXXXX 969
            EWGDRSQIATIALATHKNAIGVAVGAT+GHTICTS+AVVGGSMLASKISQGTVATV    
Sbjct: 218  EWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVGGLL 277

Query: 970  XXXXXXXXXXXPPL 1011
                       PPL
Sbjct: 278  FLGFSLSSYFYPPL 291


>emb|CAN82640.1| hypothetical protein VITISV_028821 [Vitis vinifera]
          Length = 291

 Score =  353 bits (905), Expect = 7e-95
 Identities = 193/254 (75%), Positives = 203/254 (79%)
 Frame = +1

Query: 250  DLGRRSKIVLEXXXXXXXXXXPELAVLKDTRHLDLSDTVGLGILDAFFASLSMILVSEIG 429
            DLGRRSKIVLE           +     D+  LDLS   GLG+ DAFFASLSMI+VSEIG
Sbjct: 42   DLGRRSKIVLEDLEVETTGDKKD----PDSISLDLSLDSGLGVFDAFFASLSMIIVSEIG 97

Query: 430  DETFIIAALMAMRHPKSIVLSGALSALVVMTVLSTGLGRIVPNLISRKHTNSAATVLYAF 609
            DETFIIAALMAMRHPKSIVLSGALSAL+VMTVLSTGLGRIVPNLISRKHTNSAATVLYAF
Sbjct: 98   DETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVLYAF 157

Query: 610  FGLRLLYIAWRSDSKASQXXXXXXXXXXXXTQQGKTASRRFFSRFCTPIFLESFVLTFLA 789
            FGLRLLYIAWRSDSKASQ            + QGKT+ RRFFSRFCTPIFLESF+LTFLA
Sbjct: 158  FGLRLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILTFLA 217

Query: 790  EWGDRSQIATIALATHKNAIGVAVGATLGHTICTSIAVVGGSMLASKISQGTVATVXXXX 969
            EWGDRSQIATIALATHKNAIGVAVGAT+GHTICTS+AVVGGSMLASKISQGTVATV    
Sbjct: 218  EWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVGGLL 277

Query: 970  XXXXXXXXXXXPPL 1011
                       PPL
Sbjct: 278  FLGFSLSSYFYPPL 291


>ref|XP_002514857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545908|gb|EEF47411.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 832

 Score =  338 bits (868), Expect = 1e-90
 Identities = 187/266 (70%), Positives = 204/266 (76%)
 Frame = +1

Query: 244  LRDLGRRSKIVLEXXXXXXXXXXPELAVLKDTRHLDLSDTVGLGILDAFFASLSMILVSE 423
            ++DLGRR  IV +                 ++ +L L    GLG+ DAF ASLSMI+VSE
Sbjct: 41   IKDLGRRGMIVTKDIDG-------------NSVNLGLHVDSGLGVFDAFIASLSMIIVSE 87

Query: 424  IGDETFIIAALMAMRHPKSIVLSGALSALVVMTVLSTGLGRIVPNLISRKHTNSAATVLY 603
            IGDETFIIAALMAMRHPKSIVLSGAL+AL+VMTVLSTGLGRIVPNLISRKHTNSAATVLY
Sbjct: 88   IGDETFIIAALMAMRHPKSIVLSGALTALIVMTVLSTGLGRIVPNLISRKHTNSAATVLY 147

Query: 604  AFFGLRLLYIAWRSDSKASQXXXXXXXXXXXXTQQGKTASRRFFSRFCTPIFLESFVLTF 783
            AFFGLRLLYIAWRSDSK SQ            + QGKT  RRFFSRFCTPIFLESF+LTF
Sbjct: 148  AFFGLRLLYIAWRSDSKVSQKKEMEEVEEKLESGQGKTTFRRFFSRFCTPIFLESFILTF 207

Query: 784  LAEWGDRSQIATIALATHKNAIGVAVGATLGHTICTSIAVVGGSMLASKISQGTVATVXX 963
            LAEWGDRSQIATIALATHKNAIGVAVGAT+GHTICTS+AVVGGSMLASKISQGTVAT+  
Sbjct: 208  LAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATIGG 267

Query: 964  XXXXXXXXXXXXXPPL*LHQSLNETY 1041
                         PPL L QSL+ +Y
Sbjct: 268  LLFLGFSLSSYFYPPLFL-QSLSSSY 292


>ref|XP_002325903.1| predicted membrane protein [Populus trichocarpa]
            gi|222862778|gb|EEF00285.1| predicted membrane protein
            [Populus trichocarpa]
          Length = 284

 Score =  332 bits (850), Expect = 2e-88
 Identities = 174/215 (80%), Positives = 183/215 (85%)
 Frame = +1

Query: 367  GLGILDAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALVVMTVLSTGLGR 546
            GLGI DAFFASLSMILVSEIGDETFIIAALMAMRHPKS VLSGAL+AL+VMTVLSTGLGR
Sbjct: 70   GLGIFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSTVLSGALTALIVMTVLSTGLGR 129

Query: 547  IVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSKASQXXXXXXXXXXXXTQQGKTASR 726
            IVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSK+SQ              QGKT+ R
Sbjct: 130  IVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSKSSQKKEMEEVEEKLEAGQGKTSFR 189

Query: 727  RFFSRFCTPIFLESFVLTFLAEWGDRSQIATIALATHKNAIGVAVGATLGHTICTSIAVV 906
            R+FSRFCTPIFLESF+LTFLAEWGDRSQIATIALATHKNAIGVAVGATLGHTICTS+AVV
Sbjct: 190  RYFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAVGATLGHTICTSLAVV 249

Query: 907  GGSMLASKISQGTVATVXXXXXXXXXXXXXXXPPL 1011
            GGS+LASKISQGTVAT+               PPL
Sbjct: 250  GGSLLASKISQGTVATIGGLLFLCFSLSSYFYPPL 284