BLASTX nr result

ID: Coptis25_contig00005572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005572
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW81346.1| hypothetical protein ZEAMMB73_015937 [Zea mays]        330   8e-89
gb|AFW81342.1| spliceosome RNA helicase BAT1 isoform 1 [Zea mays...   330   8e-89
emb|CBI21031.3| unnamed protein product [Vitis vinifera]              330   8e-89
ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   330   8e-89
ref|XP_002871462.1| hypothetical protein ARALYDRAFT_487950 [Arab...   329   2e-88

>gb|AFW81346.1| hypothetical protein ZEAMMB73_015937 [Zea mays]
          Length = 344

 Score =  330 bits (846), Expect = 8e-89
 Identities = 164/178 (92%), Positives = 170/178 (95%)
 Frame = +1

Query: 1   PMEIYVDDEAKLTLHGLVQHYIKLSENEKNRKLNDLLDGLDFNQVVIFVKSVSRAAELNK 180
           PMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLD LDFNQVVIFVKSVSRAAELNK
Sbjct: 164 PMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 223

Query: 181 LLTECNFPSTCIHSGMTQEERLTRYKGFKEGHKRMLVATDLVGRGIDIERVNIVLNYDMP 360
           LL ECNFPS CIHSGMTQEERLTRYK FKEGHKR+LVATDLVGRGIDIERVNIV+NYDMP
Sbjct: 224 LLCECNFPSICIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMP 283

Query: 361 DSADTYLHRVGRAGRFGTKGLAVTFVSSNSDSEVLNQVQERFEVDIKELPEDVDSSLY 534
           DSADTYLHRVGRAGRFGTKGLA+TFVSS SDS+VLNQVQERFEVDIKELPE +D+S Y
Sbjct: 284 DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTY 341


>gb|AFW81342.1| spliceosome RNA helicase BAT1 isoform 1 [Zea mays]
           gi|413948694|gb|AFW81343.1| spliceosome RNA helicase
           BAT1 isoform 2 [Zea mays] gi|413948695|gb|AFW81344.1|
           spliceosome RNA helicase BAT1 isoform 3 [Zea mays]
          Length = 429

 Score =  330 bits (846), Expect = 8e-89
 Identities = 164/178 (92%), Positives = 170/178 (95%)
 Frame = +1

Query: 1   PMEIYVDDEAKLTLHGLVQHYIKLSENEKNRKLNDLLDGLDFNQVVIFVKSVSRAAELNK 180
           PMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLD LDFNQVVIFVKSVSRAAELNK
Sbjct: 249 PMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 308

Query: 181 LLTECNFPSTCIHSGMTQEERLTRYKGFKEGHKRMLVATDLVGRGIDIERVNIVLNYDMP 360
           LL ECNFPS CIHSGMTQEERLTRYK FKEGHKR+LVATDLVGRGIDIERVNIV+NYDMP
Sbjct: 309 LLCECNFPSICIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMP 368

Query: 361 DSADTYLHRVGRAGRFGTKGLAVTFVSSNSDSEVLNQVQERFEVDIKELPEDVDSSLY 534
           DSADTYLHRVGRAGRFGTKGLA+TFVSS SDS+VLNQVQERFEVDIKELPE +D+S Y
Sbjct: 369 DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTY 426


>emb|CBI21031.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score =  330 bits (846), Expect = 8e-89
 Identities = 164/178 (92%), Positives = 170/178 (95%)
 Frame = +1

Query: 1   PMEIYVDDEAKLTLHGLVQHYIKLSENEKNRKLNDLLDGLDFNQVVIFVKSVSRAAELNK 180
           PMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLD LDFNQVVIFVKSVSRAAELNK
Sbjct: 312 PMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 371

Query: 181 LLTECNFPSTCIHSGMTQEERLTRYKGFKEGHKRMLVATDLVGRGIDIERVNIVLNYDMP 360
           LL ECNFPS CIHSGM QEERLTRYKGFKEGHKR+LVATDLVGRGIDIERVNIV+NYDMP
Sbjct: 372 LLVECNFPSICIHSGMPQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMP 431

Query: 361 DSADTYLHRVGRAGRFGTKGLAVTFVSSNSDSEVLNQVQERFEVDIKELPEDVDSSLY 534
           DSADTYLHRVGRAGRFGTKGLA+TFVSS SDS+VLNQVQERFEVDIKELPE +D+S Y
Sbjct: 432 DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTY 489


>ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Vitis
           vinifera]
          Length = 428

 Score =  330 bits (846), Expect = 8e-89
 Identities = 164/178 (92%), Positives = 170/178 (95%)
 Frame = +1

Query: 1   PMEIYVDDEAKLTLHGLVQHYIKLSENEKNRKLNDLLDGLDFNQVVIFVKSVSRAAELNK 180
           PMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLD LDFNQVVIFVKSVSRAAELNK
Sbjct: 248 PMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 307

Query: 181 LLTECNFPSTCIHSGMTQEERLTRYKGFKEGHKRMLVATDLVGRGIDIERVNIVLNYDMP 360
           LL ECNFPS CIHSGM QEERLTRYKGFKEGHKR+LVATDLVGRGIDIERVNIV+NYDMP
Sbjct: 308 LLVECNFPSICIHSGMPQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMP 367

Query: 361 DSADTYLHRVGRAGRFGTKGLAVTFVSSNSDSEVLNQVQERFEVDIKELPEDVDSSLY 534
           DSADTYLHRVGRAGRFGTKGLA+TFVSS SDS+VLNQVQERFEVDIKELPE +D+S Y
Sbjct: 368 DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTY 425


>ref|XP_002871462.1| hypothetical protein ARALYDRAFT_487950 [Arabidopsis lyrata subsp.
           lyrata] gi|297317299|gb|EFH47721.1| hypothetical protein
           ARALYDRAFT_487950 [Arabidopsis lyrata subsp. lyrata]
          Length = 427

 Score =  329 bits (843), Expect = 2e-88
 Identities = 163/178 (91%), Positives = 170/178 (95%)
 Frame = +1

Query: 1   PMEIYVDDEAKLTLHGLVQHYIKLSENEKNRKLNDLLDGLDFNQVVIFVKSVSRAAELNK 180
           PMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLD LDFNQVVIFVKSVSRAAELNK
Sbjct: 247 PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 306

Query: 181 LLTECNFPSTCIHSGMTQEERLTRYKGFKEGHKRMLVATDLVGRGIDIERVNIVLNYDMP 360
           LL ECNFPS CIHSGM+QEERLTRYK FKEGHKR+LVATDLVGRGIDIERVNIV+NYDMP
Sbjct: 307 LLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMP 366

Query: 361 DSADTYLHRVGRAGRFGTKGLAVTFVSSNSDSEVLNQVQERFEVDIKELPEDVDSSLY 534
           DSADTYLHRVGRAGRFGTKGLA+TFV+S SDSEVLNQVQERFEVDIKELPE +D+S Y
Sbjct: 367 DSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQIDTSTY 424


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