BLASTX nr result

ID: Coptis25_contig00005566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005566
         (1558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263271.1| PREDICTED: chlorophyll synthase, chloroplast...   589   e-166
ref|XP_002308227.1| predicted protein [Populus trichocarpa] gi|1...   588   e-165
gb|AEI83422.1| chlorophyll synthase [Camellia sinensis]               586   e-165
ref|XP_004148612.1| PREDICTED: chlorophyll synthase, chloroplast...   582   e-164
ref|NP_001239633.1| uncharacterized protein LOC100787459 [Glycin...   580   e-163

>ref|XP_002263271.1| PREDICTED: chlorophyll synthase, chloroplastic [Vitis vinifera]
            gi|296083177|emb|CBI22813.3| unnamed protein product
            [Vitis vinifera]
          Length = 370

 Score =  589 bits (1519), Expect = e-166
 Identities = 293/374 (78%), Positives = 318/374 (85%), Gaps = 1/374 (0%)
 Frame = -2

Query: 1461 MASLLNTVSSLNFSNRELHHLHNSSLVKPPSLSFSRRKFVIRAAETDTNE-VKAEVPNVA 1285
            MASLLNTVSS+  SN           + P SLS  RR+ V+RAAETD NE VK++ P+ A
Sbjct: 1    MASLLNTVSSVRLSNART----TPRFLPPISLSLHRRRLVVRAAETDANEAVKSQAPDKA 56

Query: 1284 PSASGSNVNQLLGIKGAAQETNKWKIRLQLMKPVTWPPLVWGVVCGAAASGNFHWNVEDV 1105
            P+ SGSN NQLLGIKGAA+ETNKWKIRLQL KPVTWPPLVWGVVCGAAASGNFHWN+EDV
Sbjct: 57   PAGSGSNFNQLLGIKGAAKETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWNLEDV 116

Query: 1104 AKSIVCMMMSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQVWVXXXXX 925
            AKSIVCM+MSGP LTGYTQT+NDWYDR+IDAINEPYRPIPSGAISENEVITQ+W+     
Sbjct: 117  AKSIVCMIMSGPCLTGYTQTLNDWYDREIDAINEPYRPIPSGAISENEVITQIWLLLLGG 176

Query: 924  XXXXXXLDVWAGHSFPTVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFALGASYISLPWW 745
                  LDVWAGH FP VFYLALGGSLLSYIYSAPPLKLKQNGW+GNFALGASYISLPWW
Sbjct: 177  LGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWW 236

Query: 744  AGQSLFGXXXXXXXXXXXLYSIAGLGIAIINDFKSIEGDRAMGLQSLPVAFGVDAAKWIC 565
            AGQ+LFG           LYSIAGLGIAI+NDFKS+EGDRA+GLQSLPVAFG + AKWIC
Sbjct: 237  AGQALFGTLNPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGAETAKWIC 296

Query: 564  VGAIDITQLSVAAYLLASGKQYYALALLGLIIPQVVFQFQYFLKDPFKYDVKYQASAQPF 385
            VGAIDITQLSVA YLL +GK YYALAL+GLIIPQV+FQFQYFLKDP KYDVKYQASAQPF
Sbjct: 297  VGAIDITQLSVAGYLLGAGKPYYALALVGLIIPQVIFQFQYFLKDPVKYDVKYQASAQPF 356

Query: 384  LVLGILVTALATSH 343
            LVLG+LVTALATSH
Sbjct: 357  LVLGLLVTALATSH 370


>ref|XP_002308227.1| predicted protein [Populus trichocarpa] gi|118486377|gb|ABK95029.1|
            unknown [Populus trichocarpa] gi|222854203|gb|EEE91750.1|
            predicted protein [Populus trichocarpa]
          Length = 372

 Score =  588 bits (1515), Expect = e-165
 Identities = 293/373 (78%), Positives = 318/373 (85%)
 Frame = -2

Query: 1461 MASLLNTVSSLNFSNRELHHLHNSSLVKPPSLSFSRRKFVIRAAETDTNEVKAEVPNVAP 1282
            MAS+LN+  SLN SN +   +   SLV P SL  +RR+  IRAA+TDTNEVK + P V+ 
Sbjct: 1    MASVLNSALSLNLSNFKSKRVRTHSLVSPLSLPLTRRRVTIRAADTDTNEVKPQAP-VSG 59

Query: 1281 SASGSNVNQLLGIKGAAQETNKWKIRLQLMKPVTWPPLVWGVVCGAAASGNFHWNVEDVA 1102
             A GS+ NQLLGIKGAAQETNKWKIRLQL KPVTWPPLVWGVVCGAAASGNF+W +EDVA
Sbjct: 60   GAGGSSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFNWTLEDVA 119

Query: 1101 KSIVCMMMSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQVWVXXXXXX 922
            KSIVCM+MSGPFLTGYTQTIND+YDR+IDAINEPYRPIPSGAISENEVITQ+WV      
Sbjct: 120  KSIVCMLMSGPFLTGYTQTINDYYDREIDAINEPYRPIPSGAISENEVITQLWVLLLGGL 179

Query: 921  XXXXXLDVWAGHSFPTVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFALGASYISLPWWA 742
                 LDVWAGH FP VFYLALGGSLLSYIYSAPPLKLKQNGW+GNFALGASYISLPWWA
Sbjct: 180  GLAGLLDVWAGHDFPVVFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWA 239

Query: 741  GQSLFGXXXXXXXXXXXLYSIAGLGIAIINDFKSIEGDRAMGLQSLPVAFGVDAAKWICV 562
            GQ+LFG           LYSIAGLGIAI+NDFKSIEGDRA+GLQSLPVAFG + AKWICV
Sbjct: 240  GQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSIEGDRALGLQSLPVAFGAETAKWICV 299

Query: 561  GAIDITQLSVAAYLLASGKQYYALALLGLIIPQVVFQFQYFLKDPFKYDVKYQASAQPFL 382
            GAIDITQLS+A YLLA GK YYALAL+GLIIPQ+VFQFQYFLKDP KYDVKYQASAQPFL
Sbjct: 300  GAIDITQLSIAGYLLADGKPYYALALVGLIIPQIVFQFQYFLKDPVKYDVKYQASAQPFL 359

Query: 381  VLGILVTALATSH 343
            VLG+LVTALATSH
Sbjct: 360  VLGLLVTALATSH 372


>gb|AEI83422.1| chlorophyll synthase [Camellia sinensis]
          Length = 374

 Score =  586 bits (1511), Expect = e-165
 Identities = 286/374 (76%), Positives = 319/374 (85%), Gaps = 1/374 (0%)
 Frame = -2

Query: 1461 MASLLNTVSSLNFSNRELHHLHNSSLVKPPSLSFSRRKFVIRAAETDTNE-VKAEVPNVA 1285
            MASLLNTVSS+  SN + + L   ++  P SLS +RR+  +RA ETD NE +KAE P+ A
Sbjct: 1    MASLLNTVSSIRLSNAKTNRLRTRTVPPPISLSLTRRRLTVRATETDANEAIKAEAPDKA 60

Query: 1284 PSASGSNVNQLLGIKGAAQETNKWKIRLQLMKPVTWPPLVWGVVCGAAASGNFHWNVEDV 1105
            P ASGS+ NQLLGIKGA QET+KWKIRLQL KPVTWPPLVWGVVCGAAASGNFHW ++DV
Sbjct: 61   PVASGSSFNQLLGIKGAKQETDKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWTLDDV 120

Query: 1104 AKSIVCMMMSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQVWVXXXXX 925
            AKSIVCM+MSGP LTGYTQT+NDWYDR+IDAINEPYRPIPSGAISENEVITQ+WV     
Sbjct: 121  AKSIVCMLMSGPCLTGYTQTLNDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLGG 180

Query: 924  XXXXXXLDVWAGHSFPTVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFALGASYISLPWW 745
                  LDVWAGH FPT+FYLA+GGSLLSYIYSAPPLKLKQNGW+GNFALGASYISLPWW
Sbjct: 181  LGLAGLLDVWAGHDFPTIFYLAIGGSLLSYIYSAPPLKLKQNGWLGNFALGASYISLPWW 240

Query: 744  AGQSLFGXXXXXXXXXXXLYSIAGLGIAIINDFKSIEGDRAMGLQSLPVAFGVDAAKWIC 565
            AGQ+LFG           LYSIAGLGIAI+NDFKS+EGDRA+GLQSLPVAFG + AKWIC
Sbjct: 241  AGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGSETAKWIC 300

Query: 564  VGAIDITQLSVAAYLLASGKQYYALALLGLIIPQVVFQFQYFLKDPFKYDVKYQASAQPF 385
            VGAID+TQLSVA YLL +GK +YALALLGLI+PQV FQF+YFLKDP KYDVKYQASAQPF
Sbjct: 301  VGAIDVTQLSVAGYLLGAGKPFYALALLGLILPQVFFQFKYFLKDPVKYDVKYQASAQPF 360

Query: 384  LVLGILVTALATSH 343
            L+LG+LVTALATSH
Sbjct: 361  LILGLLVTALATSH 374


>ref|XP_004148612.1| PREDICTED: chlorophyll synthase, chloroplastic-like [Cucumis sativus]
            gi|449517004|ref|XP_004165536.1| PREDICTED: chlorophyll
            synthase, chloroplastic-like [Cucumis sativus]
          Length = 373

 Score =  582 bits (1501), Expect = e-164
 Identities = 287/373 (76%), Positives = 313/373 (83%)
 Frame = -2

Query: 1461 MASLLNTVSSLNFSNRELHHLHNSSLVKPPSLSFSRRKFVIRAAETDTNEVKAEVPNVAP 1282
            MA  LNT+ SL  S+   + +   S + P S+SFSRR+  + AAETD NEVK++  + AP
Sbjct: 1    MALTLNTLPSLRLSSIHANRVRFQSSLSPVSVSFSRRRLSVVAAETDANEVKSKASDKAP 60

Query: 1281 SASGSNVNQLLGIKGAAQETNKWKIRLQLMKPVTWPPLVWGVVCGAAASGNFHWNVEDVA 1102
            +  GS+ NQLLGIKGAAQETNKWKIRLQL KPVTWPPLVWGVVCGAAASGNFHW +EDVA
Sbjct: 61   AGGGSSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWTIEDVA 120

Query: 1101 KSIVCMMMSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQVWVXXXXXX 922
            KSI CM+MSGPFLTGYTQTINDWYDR+IDAINEPYRPIPSGAISENEVITQ+WV      
Sbjct: 121  KSIACMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLGGL 180

Query: 921  XXXXXLDVWAGHSFPTVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFALGASYISLPWWA 742
                 LDVWAGH FPTVFYLALGGSLLSYIYSAPPLKLKQNGW+GNFALGASYISLPWWA
Sbjct: 181  GLAGLLDVWAGHDFPTVFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWA 240

Query: 741  GQSLFGXXXXXXXXXXXLYSIAGLGIAIINDFKSIEGDRAMGLQSLPVAFGVDAAKWICV 562
            GQ+LFG           LYSIAGLGIAI+NDFKS+EGDRA+GLQSLPVAFG + AKWICV
Sbjct: 241  GQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV 300

Query: 561  GAIDITQLSVAAYLLASGKQYYALALLGLIIPQVVFQFQYFLKDPFKYDVKYQASAQPFL 382
            GAIDITQLSVA YLL +GK YYALALL LI PQV FQF+YFLKDP KYDVKYQASAQPFL
Sbjct: 301  GAIDITQLSVAGYLLGAGKPYYALALLALIGPQVFFQFKYFLKDPVKYDVKYQASAQPFL 360

Query: 381  VLGILVTALATSH 343
            VLG+LVTALATSH
Sbjct: 361  VLGLLVTALATSH 373


>ref|NP_001239633.1| uncharacterized protein LOC100787459 [Glycine max]
            gi|255647387|gb|ACU24159.1| unknown [Glycine max]
          Length = 377

 Score =  580 bits (1495), Expect = e-163
 Identities = 289/377 (76%), Positives = 315/377 (83%), Gaps = 4/377 (1%)
 Frame = -2

Query: 1461 MASLLNTVSS----LNFSNRELHHLHNSSLVKPPSLSFSRRKFVIRAAETDTNEVKAEVP 1294
            MASLLN VS        S+  +  L    ++ P S+SFSRR+  IRA ETDTNEV+++ P
Sbjct: 1    MASLLNMVSVPPRISPTSHTRIASLQARPVLPPFSVSFSRRRLSIRATETDTNEVQSQAP 60

Query: 1293 NVAPSASGSNVNQLLGIKGAAQETNKWKIRLQLMKPVTWPPLVWGVVCGAAASGNFHWNV 1114
              APS  GS+ NQLLGIKGAAQETNKWKIRLQL KPVTWPPLVWGVVCGAAASGNFHWN 
Sbjct: 61   GAAPSKDGSSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWNF 120

Query: 1113 EDVAKSIVCMMMSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQVWVXX 934
            EDVAKSIVCMMMSGPFLTGYTQT+NDWYDR+IDAINEPYRPIPSGAISENEVITQ+WV  
Sbjct: 121  EDVAKSIVCMMMSGPFLTGYTQTLNDWYDREIDAINEPYRPIPSGAISENEVITQIWVLL 180

Query: 933  XXXXXXXXXLDVWAGHSFPTVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFALGASYISL 754
                     LD+WAGH FP VFYLA+GG+LLSYIYSAPPLKLKQNGW+GNFALGASYISL
Sbjct: 181  LGGLSLAGILDIWAGHDFPIVFYLAVGGALLSYIYSAPPLKLKQNGWIGNFALGASYISL 240

Query: 753  PWWAGQSLFGXXXXXXXXXXXLYSIAGLGIAIINDFKSIEGDRAMGLQSLPVAFGVDAAK 574
            PWWAGQ+LFG           LYSIAGLGIAI+NDFKS+EGDRA+GLQSLPVAFG + AK
Sbjct: 241  PWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGSETAK 300

Query: 573  WICVGAIDITQLSVAAYLLASGKQYYALALLGLIIPQVVFQFQYFLKDPFKYDVKYQASA 394
            WICVGAIDITQLSVA YLL + K +YALALLGLIIPQV FQF+YFLKDP KYDVKYQASA
Sbjct: 301  WICVGAIDITQLSVAGYLLGADKPFYALALLGLIIPQVFFQFKYFLKDPVKYDVKYQASA 360

Query: 393  QPFLVLGILVTALATSH 343
            QPFLVLG+LVTALATSH
Sbjct: 361  QPFLVLGLLVTALATSH 377


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