BLASTX nr result

ID: Coptis25_contig00005548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005548
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870236.1| hypothetical protein ARALYDRAFT_493344 [Arab...   159   2e-37
ref|NP_567466.1| BI1-like protein [Arabidopsis thaliana] gi|7516...   159   3e-37
ref|XP_002279368.2| PREDICTED: BI1-like protein-like [Vitis vini...   155   4e-36
ref|XP_004144961.1| PREDICTED: BI1-like protein-like [Cucumis sa...   155   5e-36
ref|NP_001149877.1| transmembrane BAX inhibitor motif-containing...   151   5e-35

>ref|XP_002870236.1| hypothetical protein ARALYDRAFT_493344 [Arabidopsis lyrata subsp.
           lyrata] gi|297316072|gb|EFH46495.1| hypothetical protein
           ARALYDRAFT_493344 [Arabidopsis lyrata subsp. lyrata]
          Length = 256

 Score =  159 bits (403), Expect = 2e-37
 Identities = 75/91 (82%), Positives = 86/91 (94%)
 Frame = -1

Query: 540 KKGKDFSYLGPILFTSLIVLIVASFIQMFFPLGPTSVAIFGGLGAMVFSAYLVYDTDNMI 361
           KKGKDFS+LGPILFTSLI+L+V SFIQMFFPLGPTS+AI+GG+ A+VF  Y+VYDTDN+I
Sbjct: 162 KKGKDFSFLGPILFTSLIILVVTSFIQMFFPLGPTSIAIYGGISALVFCGYIVYDTDNLI 221

Query: 360 KRYTYDEYIWASVALYLDILNLFLTILRVLR 268
           KR+TYDEYI ASVALYLDILNLFLTILR+LR
Sbjct: 222 KRFTYDEYILASVALYLDILNLFLTILRILR 252


>ref|NP_567466.1| BI1-like protein [Arabidopsis thaliana]
           gi|75164899|sp|Q94A20.1|BI1L_ARATH RecName:
           Full=BI1-like protein gi|15215827|gb|AAK91458.1|
           AT4g15470/dl3775w [Arabidopsis thaliana]
           gi|20453267|gb|AAM19872.1| AT4g15470/dl3775w
           [Arabidopsis thaliana] gi|332658207|gb|AEE83607.1|
           BI1-like protein [Arabidopsis thaliana]
          Length = 256

 Score =  159 bits (401), Expect = 3e-37
 Identities = 75/91 (82%), Positives = 85/91 (93%)
 Frame = -1

Query: 540 KKGKDFSYLGPILFTSLIVLIVASFIQMFFPLGPTSVAIFGGLGAMVFSAYLVYDTDNMI 361
           KKGKDFS+LGPILFTSLI+L+V SFIQMFFPLGPTSVA++GG  A+VF  Y+VYDTDN+I
Sbjct: 162 KKGKDFSFLGPILFTSLIILVVTSFIQMFFPLGPTSVAVYGGFSALVFCGYIVYDTDNLI 221

Query: 360 KRYTYDEYIWASVALYLDILNLFLTILRVLR 268
           KR+TYDEYI ASVALYLDILNLFLTILR+LR
Sbjct: 222 KRFTYDEYILASVALYLDILNLFLTILRILR 252


>ref|XP_002279368.2| PREDICTED: BI1-like protein-like [Vitis vinifera]
           gi|297736960|emb|CBI26161.3| unnamed protein product
           [Vitis vinifera]
          Length = 241

 Score =  155 bits (392), Expect = 4e-36
 Identities = 73/97 (75%), Positives = 87/97 (89%)
 Frame = -1

Query: 540 KKGKDFSYLGPILFTSLIVLIVASFIQMFFPLGPTSVAIFGGLGAMVFSAYLVYDTDNMI 361
           KKGKDFSYLGPILF+SLI+LI+  FIQ FFPLG TSVA++GGL A++FS Y+VYDTDN+I
Sbjct: 146 KKGKDFSYLGPILFSSLIILILTGFIQTFFPLGSTSVAVYGGLSAIIFSGYIVYDTDNLI 205

Query: 360 KRYTYDEYIWASVALYLDILNLFLTILRVLRGMQSDG 250
           KR+TYD+YIWASVALYLDILNLF+ I+ +LRG  SDG
Sbjct: 206 KRFTYDDYIWASVALYLDILNLFIAIMEILRG-GSDG 241


>ref|XP_004144961.1| PREDICTED: BI1-like protein-like [Cucumis sativus]
           gi|449471847|ref|XP_004153426.1| PREDICTED: BI1-like
           protein-like [Cucumis sativus]
           gi|449523593|ref|XP_004168808.1| PREDICTED: BI1-like
           protein-like [Cucumis sativus]
          Length = 244

 Score =  155 bits (391), Expect = 5e-36
 Identities = 67/91 (73%), Positives = 85/91 (93%)
 Frame = -1

Query: 540 KKGKDFSYLGPILFTSLIVLIVASFIQMFFPLGPTSVAIFGGLGAMVFSAYLVYDTDNMI 361
           KKGKDFSYLGP LFT+L++L++ SFIQ FFPLGPTS A++GG+GA++FS Y++YDTDN+I
Sbjct: 150 KKGKDFSYLGPFLFTALMILLLTSFIQAFFPLGPTSTAVYGGIGAIIFSGYIIYDTDNLI 209

Query: 360 KRYTYDEYIWASVALYLDILNLFLTILRVLR 268
           KR+TYD+YIWA++ LYLDILNLFLTILR+LR
Sbjct: 210 KRFTYDDYIWAAITLYLDILNLFLTILRMLR 240


>ref|NP_001149877.1| transmembrane BAX inhibitor motif-containing protein 4 [Zea mays]
           gi|195635205|gb|ACG37071.1| transmembrane BAX inhibitor
           motif-containing protein 4 [Zea mays]
           gi|195636862|gb|ACG37899.1| transmembrane BAX inhibitor
           motif-containing protein 4 [Zea mays]
           gi|223949897|gb|ACN29032.1| unknown [Zea mays]
           gi|413945290|gb|AFW77939.1| transmembrane BAX inhibitor
           motif protein-containing protein 4 [Zea mays]
          Length = 264

 Score =  151 bits (382), Expect = 5e-35
 Identities = 68/96 (70%), Positives = 86/96 (89%)
 Frame = -1

Query: 540 KKGKDFSYLGPILFTSLIVLIVASFIQMFFPLGPTSVAIFGGLGAMVFSAYLVYDTDNMI 361
           KKGK+F YLGPIL ++L +L++ SF+Q+FFPLGP SV +FGGLGA+VFS +++YDT+N+I
Sbjct: 168 KKGKEFGYLGPILSSALTILVLTSFLQVFFPLGPVSVGLFGGLGALVFSGFILYDTENLI 227

Query: 360 KRYTYDEYIWASVALYLDILNLFLTILRVLRGMQSD 253
           KR+TYDEYIWASV LYLDILNLFL+IL +LR MQSD
Sbjct: 228 KRHTYDEYIWASVGLYLDILNLFLSILNMLRSMQSD 263


Top