BLASTX nr result

ID: Coptis25_contig00005542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005542
         (1215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADC94864.1| NAC transcription factor [Vitis pseudoreticulata]      347   3e-93
ref|XP_002281816.1| PREDICTED: putative NAC domain-containing pr...   346   8e-93
gb|AGC97441.1| NAC protein 11 [Gossypium hirsutum]                    325   2e-86
ref|NP_001236900.1| NAC domain protein NAC6 [Glycine max] gi|625...   324   2e-86
ref|NP_001242390.1| uncharacterized protein LOC100816770 [Glycin...   323   4e-86

>gb|ADC94864.1| NAC transcription factor [Vitis pseudoreticulata]
          Length = 279

 Score =  347 bits (891), Expect = 3e-93
 Identities = 181/284 (63%), Positives = 213/284 (75%), Gaps = 8/284 (2%)
 Frame = -2

Query: 1139 MDETAPELELPGFRFHPTEEELLDFYLKKIVFGKKFRFDVIGFLNIYGYDPWELPGLAKI 960
            M++ A ELELPGFRFHPTEEELLDFYLK I+FGK+ RFD+IG LNIY YDPW LPGLAKI
Sbjct: 1    MEDMAAELELPGFRFHPTEEELLDFYLKNIIFGKRQRFDIIGLLNIYHYDPWALPGLAKI 60

Query: 959  GEREWYFFVPRNRKQGNGGRPNRTTEHGFWKATGSDRNIRCLNDPKRVIGLKKTLVFYRG 780
            GEREWYFFVPR+RK GNGGRPNRTTE+GFWKATGSDR I   +DPKR+IGL+KTLVFY G
Sbjct: 61   GEREWYFFVPRDRKHGNGGRPNRTTENGFWKATGSDRRILNSSDPKRIIGLRKTLVFYEG 120

Query: 779  RAPHGSKTDWVMNEYRMPENCTLPKEDIVLCKIYRKATSLKVLEQRAVMEEESKT--SQD 606
            RAPHG KTDWVMNEYR+P+NC++PK DIVLCKIYRKATSLKVLEQRA MEEE K+     
Sbjct: 121  RAPHGKKTDWVMNEYRLPDNCSIPK-DIVLCKIYRKATSLKVLEQRAAMEEEMKSVHGSP 179

Query: 605  VSPASTPDTVLF--ADQDNSWEYTITDDIVPKTEAKEDEQIKEIVKGKKDVSLTTSSMKL 432
             SP S+ D + F  + Q+          +V K E  E+   K+   G++    + SS++L
Sbjct: 180  SSPMSSMDGISFCSSQQEKPGPSMPMQGMVFKKEVVEE---KKYENGQEGAKGSCSSLQL 236

Query: 431  NSGIILPELQLPTVSLDWTQDP----FGSPWLLDMWTTYTNIIN 312
             SG  L ELQ+P    DW+QDP     GSPWL ++  TYTNI+N
Sbjct: 237  PSG-KLTELQVPKSGTDWSQDPIWTQLGSPWLQNL-NTYTNILN 278


>ref|XP_002281816.1| PREDICTED: putative NAC domain-containing protein 94 [Vitis vinifera]
            gi|297744520|emb|CBI37782.3| unnamed protein product
            [Vitis vinifera]
          Length = 279

 Score =  346 bits (887), Expect = 8e-93
 Identities = 180/284 (63%), Positives = 212/284 (74%), Gaps = 8/284 (2%)
 Frame = -2

Query: 1139 MDETAPELELPGFRFHPTEEELLDFYLKKIVFGKKFRFDVIGFLNIYGYDPWELPGLAKI 960
            M++   ELELPGFRFHPTEEELLDFYLK I+FGK+ RFD+IG LNIY YDPW LPGLAKI
Sbjct: 1    MEDMTAELELPGFRFHPTEEELLDFYLKNIIFGKRQRFDIIGLLNIYHYDPWALPGLAKI 60

Query: 959  GEREWYFFVPRNRKQGNGGRPNRTTEHGFWKATGSDRNIRCLNDPKRVIGLKKTLVFYRG 780
            GEREWYFFVPR+RK GNGGRPNRTTE+GFWKATGSDR I   +DPKR+IGL+KTLVFY G
Sbjct: 61   GEREWYFFVPRDRKHGNGGRPNRTTENGFWKATGSDRRILNSSDPKRIIGLRKTLVFYEG 120

Query: 779  RAPHGSKTDWVMNEYRMPENCTLPKEDIVLCKIYRKATSLKVLEQRAVMEEESKT--SQD 606
            RAPHG KTDWVMNEYR+P+NC++PK DIVLCKIYRKATSLKVLEQRA MEEE K+     
Sbjct: 121  RAPHGKKTDWVMNEYRLPDNCSIPK-DIVLCKIYRKATSLKVLEQRAAMEEEMKSVHGSP 179

Query: 605  VSPASTPDTVLF--ADQDNSWEYTITDDIVPKTEAKEDEQIKEIVKGKKDVSLTTSSMKL 432
             SP S+ D + F  + Q+          +V K E  E+   K+   G++    + SS++L
Sbjct: 180  SSPMSSMDGISFCSSQQEKPGPSMPMQGMVFKKEVVEE---KKYENGQEGAKGSCSSLQL 236

Query: 431  NSGIILPELQLPTVSLDWTQDP----FGSPWLLDMWTTYTNIIN 312
             SG  L ELQ+P    DW+QDP     GSPWL ++  TYTNI+N
Sbjct: 237  PSG-KLTELQVPKSGTDWSQDPIWTQLGSPWLQNL-NTYTNILN 278


>gb|AGC97441.1| NAC protein 11 [Gossypium hirsutum]
          Length = 291

 Score =  325 bits (832), Expect = 2e-86
 Identities = 173/293 (59%), Positives = 207/293 (70%), Gaps = 18/293 (6%)
 Frame = -2

Query: 1136 DETAPELELPGFRFHPTEEELLDFYLKKIVFGKKFRFDVIGFLNIYGYDPWELPGLAKIG 957
            D+T  E+ELPGFRFHPTEEELL FYLK +++G K R DVIGFLNIY +DP +LPGL+KIG
Sbjct: 8    DDTTLEMELPGFRFHPTEEELLGFYLKNMIYGNKLRDDVIGFLNIYHHDPSDLPGLSKIG 67

Query: 956  EREWYFFVPRNRKQGNGGRPNRTTEHGFWKATGSDRNIRCLNDPKRVIGLKKTLVFYRGR 777
            EREWYFFVPR+RK GNGGRPNRTTE+G+WKATGSDR I  L+DPKR+ GLKKTLVFY+GR
Sbjct: 68   EREWYFFVPRDRKHGNGGRPNRTTENGYWKATGSDRKIVSLSDPKRITGLKKTLVFYKGR 127

Query: 776  APHGSKTDWVMNEYRMPENCTLPKEDIVLCKIYRKATSLKVLEQRAVMEEESKTSQDV-- 603
            AP G+KTDWVMNEYR+P+ C+LPK DIVLCKIYRKATSLKVLEQRA +EEE K +     
Sbjct: 128  APRGNKTDWVMNEYRLPDGCSLPK-DIVLCKIYRKATSLKVLEQRAALEEELKATNTTTS 186

Query: 602  SPASTPDTVLFADQDNSWEYTITDDIVPKTE------AKEDEQIKEIVKGKKDVSLTTSS 441
            SP S+  T+ F +          +D+VP          KE E+ KE+V+ KKD     + 
Sbjct: 187  SPLSSLQTISFCNP--------KEDLVPSISETREFFKKEIEEEKELVEEKKDRIAKENK 238

Query: 440  MKLNS------GIILPELQLPTVSLDWTQDPF----GSPWLLDMWTTYTNIIN 312
            +   S         L ELQLP +  DWTQD F     SPW  ++ T Y NI+N
Sbjct: 239  VSPPSLHFPVGNEKLAELQLPKIINDWTQDQFWTQLNSPWFQNL-TPYANILN 290


>ref|NP_001236900.1| NAC domain protein NAC6 [Glycine max] gi|62546193|gb|AAX85983.1| NAC6
            protein [Glycine max] gi|66394520|gb|AAY46126.1| NAC
            domain protein NAC6 [Glycine max]
          Length = 294

 Score =  324 bits (831), Expect = 2e-86
 Identities = 174/293 (59%), Positives = 214/293 (73%), Gaps = 17/293 (5%)
 Frame = -2

Query: 1139 MDETAPELELPGFRFHPTEEELLDFYLKKIVFGKKFRFDVIGFLNIYGYDPWELPGLAKI 960
            M+  + E+ LPGFRFHPTEEELLDFYLK +V GKK R+DVIGFLNIY +DPW+LPGLAK+
Sbjct: 4    MNNMSGEITLPGFRFHPTEEELLDFYLKNMVVGKKLRYDVIGFLNIYQHDPWDLPGLAKV 63

Query: 959  GEREWYFFVPRNRKQGNGGRPNRTTEHGFWKATGSDRNIRCLNDPKRVIGLKKTLVFYRG 780
            GEREWYFFVPR++K G+GGRPNRTTE GFWKATGSDR I  L+DPKR+IGL+KTLVFY+G
Sbjct: 64   GEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYQG 123

Query: 779  RAPHGSKTDWVMNEYRMPENCTLPKEDIVLCKIYRKATSLKVLEQRAVMEEESKTSQDV- 603
            RAP G KTDWVMNEYR+P+NC LPKE IVLCKIYRKATSLKVLEQRA +EEE +  Q V 
Sbjct: 124  RAPRGCKTDWVMNEYRLPDNCKLPKE-IVLCKIYRKATSLKVLEQRAALEEEREMKQMVG 182

Query: 602  SPA--STPDTVLFA--DQDNSWEYTITDDIVPKTEAKEDEQI-------KEIVKGKKDVS 456
            SPA  S+ DT+ F+   ++ +    +   ++ K    ED  +        ++V    + S
Sbjct: 183  SPASPSSTDTMSFSSPQEEQNMPLPLLQHVLKKESETEDMVVPKQEKITNQLVLKDTNKS 242

Query: 455  LTTSSMKLNSG-IILPELQLPTVSLDWTQDPF----GSPWLLDMWTTYTNIIN 312
               +S+++  G   LP+LQLP +S DWTQD F     SPWL +   T TNI+N
Sbjct: 243  TCGTSLQMPFGKEKLPDLQLPMLS-DWTQDTFWAQLNSPWLQNF--TPTNILN 292


>ref|NP_001242390.1| uncharacterized protein LOC100816770 [Glycine max]
            gi|255635325|gb|ACU18016.1| unknown [Glycine max]
          Length = 302

 Score =  323 bits (829), Expect = 4e-86
 Identities = 176/297 (59%), Positives = 209/297 (70%), Gaps = 21/297 (7%)
 Frame = -2

Query: 1139 MDETAPELELPGFRFHPTEEELLDFYLKKIVFGKKFRFDVIGFLNIYGYDPWELPGLAKI 960
            M   + E+ LPGFRFHPTEEELLDFYLK +V GKK R+DVIGFLNIY +DPW+LPGLAK+
Sbjct: 10   MSNMSGEITLPGFRFHPTEEELLDFYLKNMVVGKKLRYDVIGFLNIYQHDPWDLPGLAKV 69

Query: 959  GEREWYFFVPRNRKQGNGGRPNRTTEHGFWKATGSDRNIRCLNDPKRVIGLKKTLVFYRG 780
            GEREWYFFVPR++K G+GGRPNRTTE GFWKATGSDR I  L+DPKR+IGL+KTLVFY+G
Sbjct: 70   GEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYQG 129

Query: 779  RAPHGSKTDWVMNEYRMPENCTLPKEDIVLCKIYRKATSLKVLEQRAVMEEESKTSQ--D 606
            RAP G KTDWVMNEYR+P+NC LPKE IVLCKIYRKATSLKVL QRA +E E +  Q  D
Sbjct: 130  RAPRGCKTDWVMNEYRLPDNCKLPKE-IVLCKIYRKATSLKVLGQRAALEGEREKKQMVD 188

Query: 605  VSPASTP---DTVLFADQDNSWEYTITDDIVPKTEAKEDEQIKEIVKGKKDVS---LTTS 444
             SPAS P   DT+ F+      E  +   ++     KE E  +++V  K++ +   LT  
Sbjct: 189  NSPASPPSSTDTMSFSSPQE--EQNLPLPLLQHVLKKESETTEDMVVSKQEKTTNQLTLK 246

Query: 443  SMKLNSGII---------LPELQLPTVSLDWTQDPF----GSPWLLDMWTTYTNIIN 312
              K   G           LP+LQLP +S DWTQD F     SPWL +   T TNI+N
Sbjct: 247  DTKSTCGTSLQMPFGKEKLPDLQLPMLS-DWTQDTFWAQLNSPWLQNF--TPTNILN 300


Top