BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005541
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90620.1| RNA binding protein-like protein [Solanum tuberosum]    96   2e-34
gb|ABB87134.1| RNA binding protein-like protein [Solanum tuberosum]    96   2e-34
ref|XP_004159468.1| PREDICTED: LOW QUALITY PROTEIN: MKI67 FHA do...    94   1e-33
ref|XP_004140894.1| PREDICTED: MKI67 FHA domain-interacting nucl...    94   1e-33
ref|XP_002530883.1| poly-A binding protein, putative [Ricinus co...    99   2e-33

>gb|AFW90620.1| RNA binding protein-like protein [Solanum tuberosum]
          Length = 217

 Score = 96.3 bits (238), Expect(2) = 2e-34
 Identities = 42/51 (82%), Positives = 47/51 (92%)
 Frame = -1

Query: 701 SKHFGFIEFVSPEVAKIVADCMHNYLLFEHMVQVHLIPPERVHPKLWKGVN 549
           SKHFGFIEF SPEVAK+VA+ MHNYLLFEH++QV LIPPE VHP+LWKGVN
Sbjct: 96  SKHFGFIEFESPEVAKVVAETMHNYLLFEHLLQVQLIPPEHVHPRLWKGVN 146



 Score = 75.9 bits (185), Expect(2) = 2e-34
 Identities = 32/61 (52%), Positives = 48/61 (78%)
 Frame = -3

Query: 570 KIMEGCESYKSPPNWTEITRKQHNKERTVEEHRKLVEGVVKRDQKRRKKIEAAGFDYVPP 391
           ++ +G   +  P +W +I RK+ +KERT+++H+KLVEG++KRD+KRRK+IEAAG DY  P
Sbjct: 140 RLWKGVNRWYKPLDWVKIERKRQDKERTLDDHKKLVEGILKRDKKRRKRIEAAGIDYECP 199

Query: 390 E 388
           E
Sbjct: 200 E 200


>gb|ABB87134.1| RNA binding protein-like protein [Solanum tuberosum]
          Length = 217

 Score = 96.3 bits (238), Expect(2) = 2e-34
 Identities = 42/51 (82%), Positives = 47/51 (92%)
 Frame = -1

Query: 701 SKHFGFIEFVSPEVAKIVADCMHNYLLFEHMVQVHLIPPERVHPKLWKGVN 549
           SKHFGFIEF SPEVAK+VA+ MHNYLLFEH++QV LIPPE VHP+LWKGVN
Sbjct: 96  SKHFGFIEFESPEVAKVVAETMHNYLLFEHLLQVQLIPPEHVHPRLWKGVN 146



 Score = 75.9 bits (185), Expect(2) = 2e-34
 Identities = 32/61 (52%), Positives = 48/61 (78%)
 Frame = -3

Query: 570 KIMEGCESYKSPPNWTEITRKQHNKERTVEEHRKLVEGVVKRDQKRRKKIEAAGFDYVPP 391
           ++ +G   +  P +W +I RK+ +KERT+++H+KLVEG++KRD+KRRK+IEAAG DY  P
Sbjct: 140 RLWKGVNRWYKPLDWVKIERKRQDKERTLDDHKKLVEGILKRDKKRRKRIEAAGIDYECP 199

Query: 390 E 388
           E
Sbjct: 200 E 200


>ref|XP_004159468.1| PREDICTED: LOW QUALITY PROTEIN: MKI67 FHA domain-interacting
           nucleolar phosphoprotein-like [Cucumis sativus]
          Length = 212

 Score = 93.6 bits (231), Expect(2) = 1e-33
 Identities = 40/52 (76%), Positives = 47/52 (90%)
 Frame = -1

Query: 701 SKHFGFIEFVSPEVAKIVADCMHNYLLFEHMVQVHLIPPERVHPKLWKGVNH 546
           SKHFG++EF SPEVAKIVAD MHNYLL+EH+++VHLI PE VHPKLWKG N+
Sbjct: 91  SKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNY 142



 Score = 76.3 bits (186), Expect(2) = 1e-33
 Identities = 34/61 (55%), Positives = 45/61 (73%)
 Frame = -3

Query: 570 KIMEGCESYKSPPNWTEITRKQHNKERTVEEHRKLVEGVVKRDQKRRKKIEAAGFDYVPP 391
           K+ +G      P NW+E+ RK HNKERT+EEH+KLV+ ++KRDQ R+K+I AAG DY  P
Sbjct: 135 KLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECP 194

Query: 390 E 388
           E
Sbjct: 195 E 195


>ref|XP_004140894.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
           phosphoprotein-like [Cucumis sativus]
          Length = 212

 Score = 93.6 bits (231), Expect(2) = 1e-33
 Identities = 40/52 (76%), Positives = 47/52 (90%)
 Frame = -1

Query: 701 SKHFGFIEFVSPEVAKIVADCMHNYLLFEHMVQVHLIPPERVHPKLWKGVNH 546
           SKHFG++EF SPEVAKIVAD MHNYLL+EH+++VHLI PE VHPKLWKG N+
Sbjct: 91  SKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNY 142



 Score = 76.3 bits (186), Expect(2) = 1e-33
 Identities = 34/61 (55%), Positives = 45/61 (73%)
 Frame = -3

Query: 570 KIMEGCESYKSPPNWTEITRKQHNKERTVEEHRKLVEGVVKRDQKRRKKIEAAGFDYVPP 391
           K+ +G      P NW+E+ RK HNKERT+EEH+KLV+ ++KRDQ R+K+I AAG DY  P
Sbjct: 135 KLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECP 194

Query: 390 E 388
           E
Sbjct: 195 E 195


>ref|XP_002530883.1| poly-A binding protein, putative [Ricinus communis]
           gi|223529536|gb|EEF31489.1| poly-A binding protein,
           putative [Ricinus communis]
          Length = 216

 Score = 98.6 bits (244), Expect(2) = 2e-33
 Identities = 41/52 (78%), Positives = 49/52 (94%)
 Frame = -1

Query: 701 SKHFGFIEFVSPEVAKIVADCMHNYLLFEHMVQVHLIPPERVHPKLWKGVNH 546
           SKH+GFIEF  PEVA++VADCMHNYLLFEH++QV+LIPPE+VHPKLWKG N+
Sbjct: 95  SKHYGFIEFEDPEVAEVVADCMHNYLLFEHLLQVYLIPPEQVHPKLWKGFNY 146



 Score = 70.5 bits (171), Expect(2) = 2e-33
 Identities = 32/60 (53%), Positives = 44/60 (73%)
 Frame = -3

Query: 570 KIMEGCESYKSPPNWTEITRKQHNKERTVEEHRKLVEGVVKRDQKRRKKIEAAGFDYVPP 391
           K+ +G      P +W +I RK  NK+RT+EEH+KLVE ++KRD+KR+K+IEAAG DY  P
Sbjct: 139 KLWKGFNYRYKPLDWVQIERKLQNKDRTLEEHKKLVEKIMKRDKKRQKRIEAAGLDYECP 198